Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27860 Brassica napus
A07p43040 Brassica napus
Aa31LG7G5960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.523 Anthoceros agrestis
Actinidia29443 Actinidia chinensis
Ah.05g172330 Amaranthus hybridus
AL2G11440 Arabidopsis lyrata
AL2G37950 Arabidopsis lyrata
Aqoxy5G02432 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BQZ9WD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN5JRL Arachis hypogaea
AT1G77720 Arabidopsis thaliana
ATR0684G022 Amborella trichopoda
ATR0684G237 Amborella trichopoda
ATR0772G007 Amborella trichopoda
Atru.chr13.1339 Acer truncatum
Atru.chr13.1382 Acer truncatum
AUR62004709 Chenopodium quinoa
AUR62023626 Chenopodium quinoa
BcaB02g07128 Brassica carinata
BcaB03g15927 Brassica carinata
BcaC08g45457 Brassica carinata
BolC6t38247H Brassica oleracea
BolC6t40191H Brassica oleracea
BraA07t30425Z Brassica rapa
BraA07t31825Z Brassica rapa
C06p30850 Brassica napus
C06p51690 Brassica napus
CAN.G392.3 Capsicum annuum
CANSAT64G0744 Cannabis sativa
CARHR071230 Cardamine hirsuta
Carub.0002s2461 Capsella rubella
Ca_15215_v3 Cicer arietinum L.
CBR_g32625 Chara braunii
Cc10_g10510 Coffea canephora
CDE05G2151 Ceratophyllum demersum
CDE11G0263 Ceratophyllum demersum
Cfa015975 Carpinus fangiana
Cfa024102 Carpinus fangiana
Ciclev10000257m.g Citrus clementina
CiPaw.05G227100 Carya illinoinensis
ClCG03G009370 Citrullus lanatus
COL.COLO4_38348 Corchorus olitorius
Cpa.g.sc36.11 Carica papaya
Cre02.g095099 Chlamydomonas reinhardtii
Cre07.g341700 Chlamydomonas reinhardtii
CsaV3_5G023250 Cucumis sativus L.
CSS0006777 Camellia sinensis var. sinensis
CSS0010068 Camellia sinensis var. sinensis
CSS0010818 Camellia sinensis var. sinensis
CSS0038352 Camellia sinensis var. sinensis
DCAR_002660 Daucus carota
Dinv07918 Davidia involucrata
Dinv27370 Davidia involucrata
ECA246G2537 Erigeron canadensis
EL10Ac1g00020 Beta vulgaris
EL10As13g24063 Beta vulgaris
Eucgr.F03751 Eucalyptus grandis
FAN15G1735 Fragaria x ananassa
FAN20G1735 Fragaria x ananassa
FAN24G3433 Fragaria x ananassa
FAN27G0670 Fragaria x ananassa
FvH4_2g26330 Fragaria vesca
Glyma.04G252700 Glycine max
Glyma.06G109800 Glycine max
Glyma.13G083100 Glycine max
Glyma.14G164400 Glycine max
Gohir.A05G232400 Gossypium hirsutum
Gohir.A06G041700 Gossypium hirsutum
Gohir.A06G041750 Gossypium hirsutum
Gohir.D05G234800 Gossypium hirsutum
Gohir.D06G042700 Gossypium hirsutum
Gorai.009G243100 Gossypium raimondii
Gorai.010G047900 Gossypium raimondii
GSVIVG01008926001 Vitis vinifera
HanXRQChr04g0111641 Helianthus annuus
HanXRQChr05g0151061 Helianthus annuus
Haze_00499 Corylus avellana
Haze_26734 Corylus avellana
HPP92_004123 Vanilla planifolia
Hund27045 Selenicereus undatus
Lalb_Chr08g0241621 Lupinus albus
Lalb_Chr23g0270831 Lupinus albus
Lj1g0001137 Lotus japonicus
Lj4A595G17 Lonicera japonica
Lj4A595T22 Lonicera japonica
Lj4A601G4 Lonicera japonica
Lj4A601T6 Lonicera japonica
Lsat_1_v5_gn_1_8300 Lactuca sativa
Lsat_1_v5_gn_6_112781 Lactuca sativa
Manes.02G160000 Manihot esculenta
Manes.18G073900 Manihot esculenta
Mapoly0042s0023 Marchantia polymorpha
MBI03_g28297_MAGBIO Magnolia biondii
MBI06_g01059_MAGBIO Magnolia biondii
MCO15G651 Micromonas commoda
MD15G1356500 Malus domestica
Medtr3g072990 Medicago truncatula
Medtr5g059280 Medicago truncatula
MELO3C003047.2 Cucumis melo
Migut.C01174 Erythranthe guttata
Migut.N03312 Erythranthe guttata
MSTRG.1478 Avicennia marina
Nitab4.5_0000193g0100 Nicotiana tabacum
Nitab4.5_0000494g0040 Nicotiana tabacum
Nn5g28118 Nelumbo nucifera
Oeu030035.2 Olea europaea
Oeu047924.1 Olea europaea
Os03g0704400 Oryza sativa ssp. japonica
Peaxi162Scf00339g00047 Petunia axillaris
PGR042G3639 Punica granatum
PGSC0003DMG401029032 Solanum tuberosum
PGSC0003DMG402029032 Solanum tuberosum
Phvul.008G166700 Phaseolus vulgaris
Phvul.009G121600 Phaseolus vulgaris
Potri.002G087600 Populus trichocarpa
Potri.005G173300 Populus trichocarpa
Pp3c16_20900 Physcomitrium patens
Pp3c6_320 Physcomitrium patens
PRCOL_00006669 Prasinoderma coloniale
Prupe.1G503700 Prunus persica
Psat2g079080 Pisum sativum
Psat4g169240 Pisum sativum
Psat5g133680 Pisum sativum
PSO017G0128 Papaver somniferum
PSO170G3840 Papaver somniferum
QL09p036005 Quercus lobata
RcHm_v2.0_Chr6g0294911 Rosa chinensis
Rhsim06G0108200 Rhododendron simsii
Sabra02G0069100 Salix brachista
Sabra05G0130800 Salix brachista
SalBow7G0080 Salvia bowleyana
SalBow7G4055 Salvia bowleyana
Sc01g0001440 Simmondsia chinensis
Sed0020608 Sechium edule
SEGI_02491 Sequoiadendron giganteum
SEGI_28937 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10494 Striga asiatica
SGA_v2.0_scaffold52G19007 Striga asiatica
SMO367G0158 Selaginella moellendorffii
Solyc11g013240.3 Solanum lycopersicum
Sopen11g008260 Solanum pennellii
Sp5g32890 Schrenkiella parvula
TAR376G1068 Trochodendron aralioides
TAR628G1041 Trochodendron aralioides
THA.LOC104800183 Tarenaya hassleriana
THA.LOC104813647 Tarenaya hassleriana
Thecc.08G119100 Theobroma cacao
Thecc.08G119500 Theobroma cacao
Thhalv10018161m.g Eutrema salsugineum
TPR.G22340 Trifolium pratense
TPR.G8515 Trifolium pratense
TWI56G1242 Tripterygium wilfordii
unitig_0.g2123 Utricularia gibba
unitig_747.g21486 Utricularia gibba
vmacro12536 Vaccinium macrocarpon
vmacro12543 Vaccinium macrocarpon
VMungo0647G1024 Vigna mungo
VMungo0647G2430 Vigna mungo
VMungo1309G0089 Vigna mungo
Zm00001eb054400 Zea mays

User provided reference genes

Program Settings