Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18690 Brassica napus
A05p12160 Brassica napus
A10p02910 Brassica napus
Aa31LG5G3950 Aethionema arabicum
Actinidia20836 Actinidia chinensis
Actinidia20837 Actinidia chinensis
Actinidia20851 Actinidia chinensis
Actinidia35814 Actinidia chinensis
Ah.04g155310 Amaranthus hybridus
AL1G14140 Arabidopsis lyrata
AL4G29010 Arabidopsis lyrata
Aqoxy5G00152 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F19H1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RX399P Arachis hypogaea
AT1G04490 Arabidopsis thaliana
AT2G33360 Arabidopsis thaliana
ATR0787G099 Amborella trichopoda
Atru.chr4.1928 Acer truncatum
BcaB02g10554 Brassica carinata
BcaC01g05846 Brassica carinata
BcaC02g11422 Brassica carinata
BolC3t14566H Brassica oleracea
BolC4t23141H Brassica oleracea
BolC5t29047H Brassica oleracea
BraA03t11129Z Brassica rapa
BraA05t20160Z Brassica rapa
BraA10t42558Z Brassica rapa
C03p21840 Brassica napus
C04p15730 Brassica napus
C05p02660 Brassica napus
CAN.G220.77 Capsicum annuum
CANSAT78G2027 Cannabis sativa
CARHR003830 Cardamine hirsuta
CARHR127360 Cardamine hirsuta
Carub.0001s0369 Capsella rubella
Carub.0004s1498 Capsella rubella
Ca_09804_v3 Cicer arietinum L.
Ca_14843_v3 Cicer arietinum L.
Ca_30485_v3 Cicer arietinum L.
Cc03_g06240 Coffea canephora
CDE02G2800 Ceratophyllum demersum
CDE05G2295 Ceratophyllum demersum
Ciclev10004536m.g Citrus clementina
CiPaw.01G178800 Carya illinoinensis
CiPaw.02G107600 Carya illinoinensis
ClCG05G004050 Citrullus lanatus
Cpa.g.sc44.7 Carica papaya
Cpa.g.sc44.8 Carica papaya
CsaV3_3G011760 Cucumis sativus L.
CSS0038922 Camellia sinensis var. sinensis
DCAR_002301 Daucus carota
Dinv27108 Davidia involucrata
Dinv29808 Davidia involucrata
Duzib151G0797 Durio zibethinus
Duzib212G0888 Durio zibethinus
ECA233G1038 Erigeron canadensis
ECA248G3112 Erigeron canadensis
EL10Ac3g04949 Beta vulgaris
Eucgr.H00133 Eucalyptus grandis
Eucgr.H02958 Eucalyptus grandis
FAN12G2073 Fragaria x ananassa
FAN17G0566 Fragaria x ananassa
FAN17G1190 Fragaria x ananassa
FAN22G0410 Fragaria x ananassa
FvH4_4g04490 Fragaria vesca
Glyma.10G134500 Glycine max
Glyma.10G190100 Glycine max
Glyma.20G085300 Glycine max
Glyma.20G200700 Glycine max
Gohir.A02G042500 Gossypium hirsutum
Gohir.A09G227700 Gossypium hirsutum
Gohir.A10G109132 Gossypium hirsutum
Gohir.A10G109148 Gossypium hirsutum
Gohir.D02G048100 Gossypium hirsutum
Gohir.D09G228700 Gossypium hirsutum
Gohir.D10G158800 Gossypium hirsutum
Gorai.005G053400 Gossypium raimondii
Gorai.006G251400 Gossypium raimondii
Gorai.011G178400 Gossypium raimondii
GSVIVG01027909001 Vitis vinifera
HanXRQChr00c0687g0576711 Helianthus annuus
HanXRQChr01g0022941 Helianthus annuus
HanXRQChr02g0059311 Helianthus annuus
Haze_11452 Corylus avellana
Hma1.2p1_0112F.1_g054670 Hydrangea macrophylla
HPP92_008533 Vanilla planifolia
Hund03083 Selenicereus undatus
Hund27520 Selenicereus undatus
Hund27527 Selenicereus undatus
Lalb_Chr02g0150661 Lupinus albus
Lalb_Chr06g0169491 Lupinus albus
Lalb_Chr21g0312491 Lupinus albus
Lj5g0002072 Lotus japonicus
Lj6E622T1 Lonicera japonica
Lsat_1_v5_gn_6_68581 Lactuca sativa
Manes.03G159700 Manihot esculenta
Manes.15G045200 Manihot esculenta
MBI07_g12937_MAGBIO Magnolia biondii
MBI10_g45150_MAGBIO Magnolia biondii
MD13G1220400 Malus domestica
MD16G1225600 Malus domestica
Medtr1g045110 Medicago truncatula
Medtr1g073360 Medicago truncatula
Medtr1g073460 Medicago truncatula
MELO3C006382.2 Cucumis melo
Migut.G00544 Erythranthe guttata
MSTRG.24663 Avicennia marina
MSTRG.4167 Avicennia marina
MSTRG.9863 Avicennia marina
Nitab4.5_0000194g0290 Nicotiana tabacum
Nitab4.5_0002751g0020 Nicotiana tabacum
Nn1g02949 Nelumbo nucifera
Nn1g07134 Nelumbo nucifera
Oeu002937.1 Olea europaea
Oeu043422.1 Olea europaea
Oeu059398.1 Olea europaea
Os03g0139200 Oryza sativa ssp. japonica
Peaxi162Scf00033g03018 Petunia axillaris
PGR004G1547 Punica granatum
PGSC0003DMG400017149 Solanum tuberosum
Phvul.007G270700 Phaseolus vulgaris
Phvul.L002144 Phaseolus vulgaris
Potri.008G171400 Populus trichocarpa
Potri.010G066200 Populus trichocarpa
Prupe.1G047300 Prunus persica
Psat2g095280 Pisum sativum
Psat6g131720 Pisum sativum
PSO764G0053 Papaver somniferum
PSO832G1877 Papaver somniferum
QL06p020863 Quercus lobata
RcHm_v2.0_Chr4g0395271 Rosa chinensis
Rhsim04G0172800 Rhododendron simsii
Sabra08G0130900 Salix brachista
Sabra10G0041000 Salix brachista
SalBow3G0550 Salvia bowleyana
Sc19g0003330 Simmondsia chinensis
Sc25g0003560 Simmondsia chinensis
Sed0022318 Sechium edule
SGA_v2.0_scaffold179G39564 Striga asiatica
SGA_v2.0_scaffold31G12640 Striga asiatica
SGA_v2.0_scaffold67G22697 Striga asiatica
SHI00741 Sapria himalayana
Solyc09g090640.3 Solanum lycopersicum
Sopen09g033580 Solanum pennellii
Sp1g03320 Schrenkiella parvula
Sp4g15670 Schrenkiella parvula
TAR362G0471 Trochodendron aralioides
TAR636G2240 Trochodendron aralioides
THA.LOC104801070 Tarenaya hassleriana
THA.LOC104826092 Tarenaya hassleriana
Thecc.04G263200 Theobroma cacao
Thhalv10016411m.g Eutrema salsugineum
TPR.G28847 Trifolium pratense
TWI09G0742 Tripterygium wilfordii
TWI73G0593 Tripterygium wilfordii
unitig_32.g10855 Utricularia gibba
unitig_748.g8300 Utricularia gibba
vmacro08550 Vaccinium macrocarpon
VMungo0720G2631 Vigna mungo
VMungo0720G2722 Vigna mungo
Zm00001eb003190 Zea mays

User provided reference genes

Program Settings