Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39710 Brassica napus
Aa31LG8G1130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_199.21 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4794 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis
Actinidia21779 Actinidia chinensis
Actinidia32167 Actinidia chinensis
Ah.07g197300 Amaranthus hybridus
Ah.08g216510 Amaranthus hybridus
AL1G64440 Arabidopsis lyrata
AL3G26120 Arabidopsis lyrata
Aqoxy2G00706 Aquilegia oxysepala
Aqoxy2G02914 Aquilegia oxysepala
Aqoxy2G02915 Aquilegia oxysepala
Aqoxy7G00272 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea
AT3G13940 Arabidopsis thaliana
ATR0185G001 Amborella trichopoda
ATR0589G117 Amborella trichopoda
ATR0762G049 Amborella trichopoda
Atru.chr1.3808 Acer truncatum
AUR62000997 Chenopodium quinoa
AUR62001510 Chenopodium quinoa
AUR62004963 Chenopodium quinoa
AUR62009860 Chenopodium quinoa
BcaB04g20967 Brassica carinata
BcaC09g48383 Brassica carinata
BolC1t05015H Brassica oleracea
BraA01t04010Z Brassica rapa
C01p50660 Brassica napus
CAN.G540.4 Capsicum annuum
CANSAT56G1493 Cannabis sativa
CARHR088750 Cardamine hirsuta
Carub.0003s1351 Capsella rubella
Carub.0003s3547 Capsella rubella
Ca_02096_v3 Cicer arietinum L.
Ca_27339_v3 Cicer arietinum L.
CBR_g45967 Chara braunii
Cc04_g01610 Coffea canephora
CDE07G0038 Ceratophyllum demersum
Ciclev10025597m.g Citrus clementina
CiPaw.01G221800 Carya illinoinensis
CiPaw.05G181900 Carya illinoinensis
ClCG09G000840 Citrullus lanatus
COL.COLO4_17027 Corchorus olitorius
COL.COLO4_30482 Corchorus olitorius
Cpa.g.sc25.86 Carica papaya
Cre01.g070567 Chlamydomonas reinhardtii
CsaV3_7G034640 Cucumis sativus L.
CSS0015890 Camellia sinensis var. sinensis
CSS0033207 Camellia sinensis var. sinensis
DCAR_005655 Daucus carota
DCAR_023423 Daucus carota
DCAR_026403 Daucus carota
Dinv03510 Davidia involucrata
Dinv03512 Davidia involucrata
Dinv21190 Davidia involucrata
Dinv30366 Davidia involucrata
Duzib205G0267 Durio zibethinus
ECA234G4408 Erigeron canadensis
EL10Ac7g16378 Beta vulgaris
EL10Ac7g16380 Beta vulgaris
Eucgr.F03167 Eucalyptus grandis
FAN02G3564 Fragaria x ananassa
FAN05G3968 Fragaria x ananassa
FAN05G5343 Fragaria x ananassa
FAN09G2135 Fragaria x ananassa
FAN14G1374 Fragaria x ananassa
FAN14G2695 Fragaria x ananassa
FAN15G1241 Fragaria x ananassa
FAN20G3048 Fragaria x ananassa
FAN24G2018 Fragaria x ananassa
FAN26G0630 Fragaria x ananassa
FAN27G1625 Fragaria x ananassa
FvH4_2g14600 Fragaria vesca
FvH4_6g34180 Fragaria vesca
FvH4_6g47280 Fragaria vesca
Glyma.15G165300 Glycine max
Gohir.A03G000500 Gossypium hirsutum
Gohir.D03G171700 Gossypium hirsutum
Gorai.003G182300 Gossypium raimondii
GSVIVG01016817001 Vitis vinifera
HanXRQChr10g0312341 Helianthus annuus
Haze_06394 Corylus avellana
Haze_15997 Corylus avellana
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla
HPP92_009424 Vanilla planifolia
Hund20819 Selenicereus undatus
Lalb_Chr08g0233321 Lupinus albus
Lj5A40G74 Lonicera japonica
Lj6g0016044 Lotus japonicus
Lj6g0018808 Lotus japonicus
Lsat_1_v5_gn_5_135221 Lactuca sativa
Manes.04G142200 Manihot esculenta
Manes.11G023100 Manihot esculenta
Mapoly0063s0055 Marchantia polymorpha
MCO04G364 Micromonas commoda
MD09G1187900 Malus domestica
MD12G1097800 Malus domestica
MD17G1172300 Malus domestica
Medtr2g037460 Medicago truncatula
Medtr2g037880 Medicago truncatula
Medtr7g104810 Medicago truncatula
MELO3C024372.2 Cucumis melo
Migut.D00948 Erythranthe guttata
MSTRG.22562 Avicennia marina
Nitab4.5_0000035g0090 Nicotiana tabacum
Nitab4.5_0004287g0020 Nicotiana tabacum
Nitab4.5_0012713g0010 Nicotiana tabacum
Nn6g35749 Nelumbo nucifera
Oeu004353.1 Olea europaea
Oeu027301.1 Olea europaea
Oeu044709.1 Olea europaea
Oeu047041.1 Olea europaea
Os11g0615100 Oryza sativa ssp. japonica
Peaxi162Scf00060g02815 Petunia axillaris
Peaxi162Scf00647g00219 Petunia axillaris
Peaxi162Scf00943g00014 Petunia axillaris
Peaxi162Scf01131g00007 Petunia axillaris
PGR119G1065 Punica granatum
PGSC0003DMG400002436 Solanum tuberosum
PGSC0003DMG400016304 Solanum tuberosum
Phvul.009G236700 Phaseolus vulgaris
Potri.001G198600 Populus trichocarpa
Pp3c8_24340 Physcomitrium patens
Prupe.3G044800 Prunus persica
Psat1g144000 Pisum sativum
PSO017G0055 Papaver somniferum
PSO135G0558 Papaver somniferum
PSO724G1089 Papaver somniferum
QL04p029653 Quercus lobata
QL05p009436 Quercus lobata
RcHm_v2.0_Chr2g0144531 Rosa chinensis
RcHm_v2.0_Chr2g0166351 Rosa chinensis
Rhsim08G0236100 Rhododendron simsii
Rhsim10G0150900 Rhododendron simsii
Sabra01G0155800 Salix brachista
Sc12g0010440 Simmondsia chinensis
Sed0007780 Sechium edule
Sed0020704 Sechium edule
SEGI_22335 Sequoiadendron giganteum
SEGI_28110 Sequoiadendron giganteum
SEGI_36774 Sequoiadendron giganteum
SGA_v2.0_scaffold68G22895 Striga asiatica
SMO144G0124 Selaginella moellendorffii
Solyc06g053330.4 Solanum lycopersicum
Sopen06g018390 Solanum pennellii
Sp3g12180 Schrenkiella parvula
TAR375G0086 Trochodendron aralioides
THA.LOC104804933 Tarenaya hassleriana
THA.LOC104822769 Tarenaya hassleriana
THA.LOC104822775 Tarenaya hassleriana
Thecc.03G227200 Theobroma cacao
Thhalv10020760m.g Eutrema salsugineum
TPR.G13789 Trifolium pratense
TPR.G16496 Trifolium pratense
TPR.G16505 Trifolium pratense
TWI23G0436 Tripterygium wilfordii
vmacro22224 Vaccinium macrocarpon
Zm00001eb166800 Zea mays

User provided reference genes

Program Settings