Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03090 Brassica napus
A03p63630 Brassica napus
A06p33900 Brassica napus
A07p03430 Brassica napus
Aa31LG8G14840 Aethionema arabicum
Actinidia17355 Actinidia chinensis
Actinidia22893 Actinidia chinensis
Actinidia28747 Actinidia chinensis
Actinidia35683 Actinidia chinensis
Ah.03g142860 Amaranthus hybridus
AL3G50510 Arabidopsis lyrata
AL7G15660 Arabidopsis lyrata
Aqoxy6G01610 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7Y7MXI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PTZ9GF Arachis hypogaea
AT2G17540 Arabidopsis thaliana
AT4G35510 Arabidopsis thaliana
Atru.chr3.127 Acer truncatum
AUR62002052 Chenopodium quinoa
AUR62003743 Chenopodium quinoa
BcaB03g16523 Brassica carinata
BcaB08g34743 Brassica carinata
BcaC01g02911 Brassica carinata
BcaC06g36286 Brassica carinata
BcaNung00585 Brassica carinata
BcaNung03633 Brassica carinata
BolC1t00331H Brassica oleracea
BolC3t18106H Brassica oleracea
BolC7t40973H Brassica oleracea
BolC7t46546H Brassica oleracea
BraA01t00293Z Brassica rapa
BraA03t15434Z Brassica rapa
BraA06t26325Z Brassica rapa
BraA07t28141Z Brassica rapa
C01p03440 Brassica napus
C03p58480 Brassica napus
C07p05740 Brassica napus
C07p61200 Brassica napus
CAN.G1238.15 Capsicum annuum
CAN.G354.13 Capsicum annuum
CANSAT25G3726 Cannabis sativa
CARHR107720 Cardamine hirsuta
CARHR243840 Cardamine hirsuta
Carub.0003s3163 Capsella rubella
Carub.0007s0482 Capsella rubella
Ca_02853_v3 Cicer arietinum L.
Cc07_g11920 Coffea canephora
CDE05G3647 Ceratophyllum demersum
Cfa007085 Carpinus fangiana
Ciclev10025852m.g Citrus clementina
CiPaw.07G002200 Carya illinoinensis
CiPaw.08G182000 Carya illinoinensis
CiPaw.13G121300 Carya illinoinensis
ClCG10G000160 Citrullus lanatus
COL.COLO4_22555 Corchorus olitorius
Cpa.g.sc6.366 Carica papaya
CsaV3_3G000180 Cucumis sativus L.
CSS0013805 Camellia sinensis var. sinensis
CSS0016949 Camellia sinensis var. sinensis
CSS0044881 Camellia sinensis var. sinensis
DCAR_014284 Daucus carota
DCAR_014308 Daucus carota
Dinv40192 Davidia involucrata
Dinv40193 Davidia involucrata
Duzib147G0341 Durio zibethinus
Duzib264G0151 Durio zibethinus
ECA246G3765 Erigeron canadensis
EL10Ac6g15050 Beta vulgaris
Eucgr.I02220 Eucalyptus grandis
Eucgr.J02539 Eucalyptus grandis
FAN19G0089 Fragaria x ananassa
FAN23G0043 Fragaria x ananassa
FAN26G2737 Fragaria x ananassa
FvH4_1g10260 Fragaria vesca
Glyma.01G158300 Glycine max
Glyma.09G197900 Glycine max
Glyma.11G086400 Glycine max
Glyma.16G111400 Glycine max
Gohir.A02G178300 Gossypium hirsutum
Gohir.A07G173800 Gossypium hirsutum
Gohir.D03G001500 Gossypium hirsutum
Gohir.D07G178200 Gossypium hirsutum
Gorai.001G199300 Gossypium raimondii
Gorai.003G001900 Gossypium raimondii
GSVIVG01022291001 Vitis vinifera
HanXRQChr16g0531901 Helianthus annuus
HanXRQChr16g0531911 Helianthus annuus
Hma1.2p1_0085F.1_g044630 Hydrangea macrophylla
Hma1.2p1_0300F.1_g117950 Hydrangea macrophylla
Lalb_Chr05g0214821 Lupinus albus
Lalb_Chr09g0324761 Lupinus albus
Lalb_Chr09g0334351 Lupinus albus
Lalb_Chr16g0380091 Lupinus albus
Lj2g0010108 Lotus japonicus
Lj2P500T27 Lonicera japonica
Lj4g0016332 Lotus japonicus
Lj4P237T30 Lonicera japonica
Lsat_1_v5_gn_3_67941 Lactuca sativa
Lsat_1_v5_gn_8_112420 Lactuca sativa
Manes.01G155700 Manihot esculenta
Manes.02G114400 Manihot esculenta
MBI08_g12255_MAGBIO Magnolia biondii
MD02G1114600 Malus domestica
MD15G1230400 Malus domestica
Medtr8g073305 Medicago truncatula
MELO3C013712.2 Cucumis melo
Migut.F00308 Erythranthe guttata
Migut.F01091 Erythranthe guttata
Nitab4.5_0000143g0560 Nicotiana tabacum
Nitab4.5_0001467g0050 Nicotiana tabacum
Nitab4.5_0004608g0040 Nicotiana tabacum
Nn6g31686 Nelumbo nucifera
Oeu043391.2 Olea europaea
Oeu045734.2 Olea europaea
Peaxi162Scf00121g00249 Petunia axillaris
Peaxi162Scf00580g00013 Petunia axillaris
PGR119G1834 Punica granatum
PGSC0003DMG400001515 Solanum tuberosum
PGSC0003DMG400018682 Solanum tuberosum
Phvul.002G117000 Phaseolus vulgaris
Phvul.003G270300 Phaseolus vulgaris
Potri.005G102000 Populus trichocarpa
Potri.007G063000 Populus trichocarpa
Prupe.7G183600 Prunus persica
Psat4g103680 Pisum sativum
PSO210G4741 Papaver somniferum
PSO761G0558 Papaver somniferum
QL06p053029 Quercus lobata
RcHm_v2.0_Chr2g0097081 Rosa chinensis
Rhsim10G0195100 Rhododendron simsii
Sabra05G0084400 Salix brachista
Sabra07G0052400 Salix brachista
SalBow2G0301 Salvia bowleyana
SalBow2G0742 Salvia bowleyana
Sc07g0001390 Simmondsia chinensis
Sed0027819 Sechium edule
SGA_v2.0_scaffold10G05298 Striga asiatica
SGA_v2.0_scaffold60G21098 Striga asiatica
Solyc02g082570.3 Solanum lycopersicum
Solyc03g032100.2 Solanum lycopersicum
Sopen02g027250 Solanum pennellii
Sopen03g005950 Solanum pennellii
Sp3g30900 Schrenkiella parvula
Sp7g33290 Schrenkiella parvula
TAR376G0940 Trochodendron aralioides
TAR381G0338 Trochodendron aralioides
TAR625G1485 Trochodendron aralioides
THA.LOC104804296 Tarenaya hassleriana
THA.LOC104807425 Tarenaya hassleriana
THA.LOC104819714 Tarenaya hassleriana
Thecc.01G004900 Theobroma cacao
Thhalv10022789m.g Eutrema salsugineum
Thhalv10022985m.g Eutrema salsugineum
Thhalv10025668m.g Eutrema salsugineum
TPR.G13730 Trifolium pratense
TWI09G0210 Tripterygium wilfordii
TWI53G1718 Tripterygium wilfordii
unitig_46.g18801 Utricularia gibba
unitig_52.g17736 Utricularia gibba
vmacro20627 Vaccinium macrocarpon
VMungo0251G1478 Vigna mungo
VMungo1215G0928 Vigna mungo

User provided reference genes

Program Settings