Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p13940 Brassica napus
A09p41530 Brassica napus
Aa31LG7G7270 Aethionema arabicum
Actinidia25661 Actinidia chinensis
Actinidia25662 Actinidia chinensis
Actinidia25877 Actinidia chinensis
Ah.03g137400 Amaranthus hybridus
AL1G37020 Arabidopsis lyrata
Aqoxy3G00033 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LF64TX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0X7A3 Arachis hypogaea
AT1G23230 Arabidopsis thaliana
ATR0753G138 Amborella trichopoda
Atru.chr11.518 Acer truncatum
AUR62014157 Chenopodium quinoa
AUR62038465 Chenopodium quinoa
BcaB03g14154 Brassica carinata
BcaB07g32312 Brassica carinata
BcaB07g32314 Brassica carinata
BcaC05g26233 Brassica carinata
BcaC06g35029 Brassica carinata
BolC5t30944H Brassica oleracea
BolC7t42575H Brassica oleracea
BraA07t29150Z Brassica rapa
BraA09t39644Z Brassica rapa
C05p22460 Brassica napus
C07p20490 Brassica napus
CAN.G45.11 Capsicum annuum
CAN.G45.12 Capsicum annuum
CANSAT01G0135 Cannabis sativa
CARHR023690 Cardamine hirsuta
Carub.0001s2282 Capsella rubella
Ca_12568_v3 Cicer arietinum L.
Cc11_g08040 Coffea canephora
CDE07G0372 Ceratophyllum demersum
Ciclev10014030m.g Citrus clementina
CiPaw.05G190600 Carya illinoinensis
CiPaw.05G190700 Carya illinoinensis
ClCG01G006440 Citrullus lanatus
COL.COLO4_13080 Corchorus olitorius
Cpa.g.sc2.214 Carica papaya
Cpa.g.sc2.218 Carica papaya
Cpa.g.sc2.220 Carica papaya
Cpa.g.sc2.221 Carica papaya
CsaV3_5G028240 Cucumis sativus L.
CSS0010110 Camellia sinensis var. sinensis
CSS0030927 Camellia sinensis var. sinensis
DCAR_007321 Daucus carota
DCAR_030256 Daucus carota
Dinv18635 Davidia involucrata
Dinv26250 Davidia involucrata
Duzib084G1091 Durio zibethinus
Duzib251G0182 Durio zibethinus
ECA246G0702 Erigeron canadensis
EL10Ac6g14152 Beta vulgaris
Eucgr.B02949 Eucalyptus grandis
Eucgr.B02952 Eucalyptus grandis
FAN07G1109 Fragaria x ananassa
FAN12G0749 Fragaria x ananassa
FAN17G2093 Fragaria x ananassa
FvH4_4g33860 Fragaria vesca
Glyma.09G123500 Glycine max
Gohir.A03G118100 Gossypium hirsutum
Gohir.A03G118200 Gossypium hirsutum
Gohir.D01G141400 Gossypium hirsutum
Gohir.D02G141800 Gossypium hirsutum
Gorai.002G174000 Gossypium raimondii
Gorai.005G158900 Gossypium raimondii
Gorai.010G022100 Gossypium raimondii
GSVIVG01011680001 Vitis vinifera
HanXRQChr17g0566691 Helianthus annuus
HanXRQChr17g0567351 Helianthus annuus
Haze_10915 Corylus avellana
Haze_10916 Corylus avellana
Haze_10917 Corylus avellana
Haze_10919 Corylus avellana
HPP92_024819 Vanilla planifolia
HPP92_024820 Vanilla planifolia
HPP92_024821 Vanilla planifolia
Hund06909 Selenicereus undatus
Hund24934 Selenicereus undatus
Lalb_Chr13g0290691 Lupinus albus
Lalb_Chr16g0387721 Lupinus albus
Lj2g0013863 Lotus japonicus
Lj3A865G68 Lonicera japonica
Lsat_1_v5_gn_3_55840 Lactuca sativa
Lsat_1_v5_gn_4_12821 Lactuca sativa
Manes.17G082000 Manihot esculenta
Mapoly0005s0093 Marchantia polymorpha
MD13G1030100 Malus domestica
MD16G1020900 Malus domestica
Medtr1g031910 Medicago truncatula
MELO3C005286.2 Cucumis melo
Migut.L00545 Erythranthe guttata
Migut.L00554 Erythranthe guttata
MSTRG.7613 Avicennia marina
Nitab4.5_0000018g0010 Nicotiana tabacum
Nitab4.5_0000018g0020 Nicotiana tabacum
Nitab4.5_0005025g0010 Nicotiana tabacum
Nitab4.5_0008542g0010 Nicotiana tabacum
Nitab4.5_0008542g0020 Nicotiana tabacum
Nitab4.5_0008542g0030 Nicotiana tabacum
Nitab4.5_0008542g0040 Nicotiana tabacum
Nn4g24297 Nelumbo nucifera
Oeu018613.1 Olea europaea
Os02g0732700 Oryza sativa ssp. japonica
Peaxi162Scf00376g00032 Petunia axillaris
Peaxi162Scf00376g00324 Petunia axillaris
PGR042G0049 Punica granatum
PGR042G2175 Punica granatum
Phvul.003G021100 Phaseolus vulgaris
Potri.008G133300 Populus trichocarpa
Potri.010G108350 Populus trichocarpa
Pp3c27_2940 Physcomitrium patens
Prupe.1G331400 Prunus persica
Psat0ss9816g0080 Pisum sativum
Psat0ss9816g0160 Pisum sativum
Psat2g053360 Pisum sativum
Psat6g045000 Pisum sativum
Psat6g165840 Pisum sativum
PSO017G2325 Papaver somniferum
PSO083G0001 Papaver somniferum
PSO478G2641 Papaver somniferum
QL03p034852 Quercus lobata
QL03p034878 Quercus lobata
RcHm_v2.0_Chr4g0443371 Rosa chinensis
Rhsim09G0063500 Rhododendron simsii
Rhsim09G0063700 Rhododendron simsii
Sabra08G0101900 Salix brachista
SalBow8G1470 Salvia bowleyana
Sc14g0006960 Simmondsia chinensis
Sed0000894 Sechium edule
SEGI_05575 Sequoiadendron giganteum
SEGI_15839 Sequoiadendron giganteum
SEGI_21450 Sequoiadendron giganteum
SEGI_38026 Sequoiadendron giganteum
SGA_v2.0_scaffold50G18460 Striga asiatica
SHI04465 Sapria himalayana
SHI04469 Sapria himalayana
SHI04470 Sapria himalayana
SMO364G0727 Selaginella moellendorffii
Solyc05g016440.3 Solanum lycopersicum
Solyc05g016460.2 Solanum lycopersicum
Sopen03g014530 Solanum pennellii
Sopen05g013790 Solanum pennellii
Sp1g20700 Schrenkiella parvula
TAR374G0310 Trochodendron aralioides
THA.LOC104822992 Tarenaya hassleriana
Thecc.02G290300 Theobroma cacao
Thhalv10006548m.g Eutrema salsugineum
TPR.G36876 Trifolium pratense
TWI74G0839 Tripterygium wilfordii
TWI77G0048 Tripterygium wilfordii
unitig_899.g15633 Utricularia gibba
vmacro00393 Vaccinium macrocarpon
vmacro00394 Vaccinium macrocarpon
VMungo1215G0458 Vigna mungo
VMungo1215G0989 Vigna mungo
VMungo1215G1550 Vigna mungo
VMungo1215G3220 Vigna mungo
Zm00001eb253700 Zea mays

User provided reference genes

Program Settings