Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37550 Brassica napus
Aa31LG1G9690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2756 Anthoceros agrestis
Actinidia32228 Actinidia chinensis
AL1G12300 Arabidopsis lyrata
AL4G43830 Arabidopsis lyrata
Aqoxy5G00729 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E95WBF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6REY5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TC9I43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4DRNI Arachis hypogaea
AT1G02880 Arabidopsis thaliana
AT2G44750 Arabidopsis thaliana
ATR0693G457 Amborella trichopoda
Atru.chr5.1172 Acer truncatum
AUR62008659 Chenopodium quinoa
BcaB01g01260 Brassica carinata
BcaB03g13500 Brassica carinata
BcaB03g15756 Brassica carinata
BcaC05g24583 Brassica carinata
BcaC05g24629 Brassica carinata
BcaC07g36986 Brassica carinata
BcaC07g36988 Brassica carinata
BolC5t28933H Brassica oleracea
BolC8t46831H Brassica oleracea
BraA08t35652Z Brassica rapa
C08p00300 Brassica napus
CAN.G339.23 Capsicum annuum
CANSAT25G2200 Cannabis sativa
CANSAT25G3274 Cannabis sativa
CARHR002230 Cardamine hirsuta
Carub.0001s0201 Capsella rubella
Carub.0007s3652 Capsella rubella
Carub.0033s0005 Capsella rubella
Ca_09149_v3 Cicer arietinum L.
CBR_g34733 Chara braunii
CBR_g34735 Chara braunii
Cc01_g20710 Coffea canephora
Cc04_g10720 Coffea canephora
CDE05G1992 Ceratophyllum demersum
CDE11G0241 Ceratophyllum demersum
Cfa005939 Carpinus fangiana
Ciclev10021279m.g Citrus clementina
CiPaw.07G106900 Carya illinoinensis
ClCG09G005980 Citrullus lanatus
COL.COLO4_23368 Corchorus olitorius
Cre01.g040050 Chlamydomonas reinhardtii
CsaV3_7G029140 Cucumis sativus L.
CSS0010827 Camellia sinensis var. sinensis
DCAR_002821 Daucus carota
DCAR_005799 Daucus carota
Dinv19708 Davidia involucrata
Dinv33040 Davidia involucrata
Duzib133G1297 Durio zibethinus
Duzib138G0322 Durio zibethinus
Duzib211G0323 Durio zibethinus
Duzib211G0511 Durio zibethinus
ECA247G0114 Erigeron canadensis
EL10Ac2g03462 Beta vulgaris
Eucgr.H01156 Eucalyptus grandis
FAN16G1537 Fragaria x ananassa
FAN24G2667 Fragaria x ananassa
FvH4_2g25500 Fragaria vesca
Glyma.03G213500 Glycine max
Glyma.19G210300 Glycine max
Gohir.A08G042700 Gossypium hirsutum
Gohir.A12G131600 Gossypium hirsutum
Gohir.D08G052500 Gossypium hirsutum
Gohir.D12G135400 Gossypium hirsutum
Gorai.004G052600 Gossypium raimondii
Gorai.008G146400 Gossypium raimondii
GSVIVG01027984001 Vitis vinifera
HanXRQChr10g0284561 Helianthus annuus
HanXRQChr15g0465781 Helianthus annuus
Haze_04907 Corylus avellana
Hma1.2p1_0491F.1_g164430 Hydrangea macrophylla
HPP92_013717 Vanilla planifolia
Hund05414 Selenicereus undatus
Hund18137 Selenicereus undatus
Lalb_Chr18g0047081 Lupinus albus
Lj1g0003703 Lotus japonicus
Lj1g0006783 Lotus japonicus
Lj2C1191G7 Lonicera japonica
Lsat_1_v5_gn_9_901 Lactuca sativa
Manes.01G217400 Manihot esculenta
Manes.05G063600 Manihot esculenta
Mapoly0113s0040 Marchantia polymorpha
MBI19_g12143_MAGBIO Magnolia biondii
MCO04G072 Micromonas commoda
MD02G1044000 Malus domestica
MD02G1044100 Malus domestica
MD03G1285900 Malus domestica
MD06G1023200 Malus domestica
MD06G1023300 Malus domestica
MD11G1034700 Malus domestica
MD11G1305700 Malus domestica
Medtr7g108680 Medicago truncatula
Medtr8g058563 Medicago truncatula
MELO3C016014.2 Cucumis melo
Migut.D00201 Erythranthe guttata
MSTRG.18165 Avicennia marina
Nitab4.5_0000619g0170 Nicotiana tabacum
Nitab4.5_0001756g0180 Nicotiana tabacum
Nitab4.5_0001756g0250 Nicotiana tabacum
Nitab4.5_0001756g0260 Nicotiana tabacum
Nitab4.5_0002469g0010 Nicotiana tabacum
Nitab4.5_0005515g0010 Nicotiana tabacum
Nn1g04358 Nelumbo nucifera
Nn4g25831 Nelumbo nucifera
Oeu032104.1 Olea europaea
Os01g0356500 Oryza sativa ssp. japonica
Os01g0931400 Oryza sativa ssp. japonica
Os05g0367400 Oryza sativa ssp. japonica
Peaxi162Scf00001g04911 Petunia axillaris
PGR119G0381 Punica granatum
PGR119G0650 Punica granatum
PGSC0003DMG401011372 Solanum tuberosum
Phvul.001G206100 Phaseolus vulgaris
Potri.002G205800 Populus trichocarpa
Potri.014G130900 Populus trichocarpa
Pp3c26_15150 Physcomitrium patens
Pp3c4_27720 Physcomitrium patens
PRCOL_00001679 Prasinoderma coloniale
Prupe.8G259100 Prunus persica
Psat0s3188g0040 Pisum sativum
PSO210G7114 Papaver somniferum
PSO302G0109 Papaver somniferum
PSO782G2310 Papaver somniferum
PSO832G3509 Papaver somniferum
QL12p026683 Quercus lobata
QL12p027258 Quercus lobata
RcHm_v2.0_Chr6g0293711 Rosa chinensis
Rhsim13G0011700 Rhododendron simsii
Sabra02G0153500 Salix brachista
Sabra14G0097400 Salix brachista
Sc05g0004150 Simmondsia chinensis
Sed0017881 Sechium edule
SEGI_10498 Sequoiadendron giganteum
SEGI_14482 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00376 Striga asiatica
SHI29035 Sapria himalayana
SMO119G0015 Selaginella moellendorffii
SMO304G0017 Selaginella moellendorffii
SMO304G0077 Selaginella moellendorffii
SMO304G0108 Selaginella moellendorffii
SMO304G0134 Selaginella moellendorffii
Solyc09g074970.3 Solanum lycopersicum
Sopen09g029800 Solanum pennellii
Sp1g01880 Schrenkiella parvula
TAR362G0097 Trochodendron aralioides
TAR633G0484 Trochodendron aralioides
THA.LOC104825974 Tarenaya hassleriana
Thecc.01G297900 Theobroma cacao
Thhalv10008492m.g Eutrema salsugineum
TPR.G9643 Trifolium pratense
TWI14G0137 Tripterygium wilfordii
TWI59G0713 Tripterygium wilfordii
unitig_0.g656 Utricularia gibba
vmacro02463 Vaccinium macrocarpon
Zm00001eb131550 Zea mays
Zm00001eb142350 Zea mays
Zm00001eb285500 Zea mays

User provided reference genes

Program Settings