Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40420 Brassica napus
Aa31LG9G14800 Aethionema arabicum
Actinidia01026 Actinidia chinensis
Actinidia10866 Actinidia chinensis
Actinidia25914 Actinidia chinensis
Actinidia31492 Actinidia chinensis
Actinidia31652 Actinidia chinensis
Aqoxy3G02644 Aquilegia oxysepala
Aqoxy6G00065 Aquilegia oxysepala
ATR0745G048 Amborella trichopoda
ATR1136G026 Amborella trichopoda
ATR1136G211 Amborella trichopoda
ATR1136G215 Amborella trichopoda
Atru.chr6.1971 Acer truncatum
Atru.chr9.1196 Acer truncatum
Atru.chr9.1197 Acer truncatum
BcaB01g02799 Brassica carinata
BcaB04g18966 Brassica carinata
BcaC01g03728 Brassica carinata
BolC3t17205H Brassica oleracea
BraA03t13197Z Brassica rapa
C03p49230 Brassica napus
CAN.G572.17 Capsicum annuum
CAN.G572.18 Capsicum annuum
CAN.G845.22 Capsicum annuum
CANSAT21G0033 Cannabis sativa
CANSAT21G0737 Cannabis sativa
CANSAT56G0658 Cannabis sativa
CANSAT56G2756 Cannabis sativa
CANSAT56G2887 Cannabis sativa
CANSAT56G4079 Cannabis sativa
CARHR260260 Cardamine hirsuta
Carub.0006s2782 Capsella rubella
Cc06_g12260 Coffea canephora
Cc08_g11210 Coffea canephora
Cfa012333 Carpinus fangiana
Cfa012334 Carpinus fangiana
Cfa012335 Carpinus fangiana
Ciclev10022894m.g Citrus clementina
Ciclev10022946m.g Citrus clementina
Ciclev10030379m.g Citrus clementina
Ciclev10033338m.g Citrus clementina
Ciclev10033339m.g Citrus clementina
ClCG10G002150 Citrullus lanatus
COL.COLO4_06685 Corchorus olitorius
COL.COLO4_21695 Corchorus olitorius
COL.COLO4_32251 Corchorus olitorius
COL.COLO4_37301 Corchorus olitorius
COL.COLO4_37302 Corchorus olitorius
Cpa.g.sc13.213 Carica papaya
CsaV3_3G002240 Cucumis sativus L.
CsaV3_3G004710 Cucumis sativus L.
CSS0044628 Camellia sinensis var. sinensis
DCAR_003519 Daucus carota
DCAR_005587 Daucus carota
DCAR_008327 Daucus carota
Dinv25140 Davidia involucrata
Dinv28881 Davidia involucrata
Dinv34529 Davidia involucrata
Dinv34530 Davidia involucrata
Duzib068G0789 Durio zibethinus
Duzib068G1042 Durio zibethinus
Duzib205G0410 Durio zibethinus
Duzib205G0528 Durio zibethinus
ECA240G0589 Erigeron canadensis
ECA240G1407 Erigeron canadensis
ECA240G4009 Erigeron canadensis
EL10Ac1g00121 Beta vulgaris
Eucgr.K00114 Eucalyptus grandis
Eucgr.K00115 Eucalyptus grandis
FAN01G0604 Fragaria x ananassa
FAN03G2468 Fragaria x ananassa
FAN03G2786 Fragaria x ananassa
FAN06G5092 Fragaria x ananassa
FAN10G3781 Fragaria x ananassa
FAN10G4140 Fragaria x ananassa
FAN17G1151 Fragaria x ananassa
FvH4_7g26400 Fragaria vesca
FvH4_7g26430 Fragaria vesca
Gohir.A12G212400 Gossypium hirsutum
Gohir.D12G214900 Gossypium hirsutum
Gohir.D13G124300 Gossypium hirsutum
Gorai.008G230500 Gossypium raimondii
Gorai.013G138900 Gossypium raimondii
GSVIVG01004822001 Vitis vinifera
GSVIVG01004827001 Vitis vinifera
GSVIVG01004832001 Vitis vinifera
GSVIVG01004835001 Vitis vinifera
GSVIVG01004836001 Vitis vinifera
GSVIVG01004838001 Vitis vinifera
GSVIVG01013815001 Vitis vinifera
GSVIVG01013816001 Vitis vinifera
GSVIVG01013825001 Vitis vinifera
GSVIVG01013894001 Vitis vinifera
GSVIVG01024502001 Vitis vinifera
GSVIVG01024506001 Vitis vinifera
HanXRQChr03g0089681 Helianthus annuus
HanXRQChr03g0089691 Helianthus annuus
HanXRQChr13g0418291 Helianthus annuus
HanXRQChr13g0419051 Helianthus annuus
HanXRQChr13g0419061 Helianthus annuus
Haze_08359 Corylus avellana
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla
Hund27103 Selenicereus undatus
Lsat_1_v5_gn_6_94401 Lactuca sativa
Lsat_1_v5_gn_6_94501 Lactuca sativa
Manes.01G089900 Manihot esculenta
MD07G1239500 Malus domestica
MD07G1239700 Malus domestica
MD07G1239800 Malus domestica
MELO3C013895.2 Cucumis melo
MELO3C014170.2 Cucumis melo
Migut.H01906 Erythranthe guttata
Migut.H01907 Erythranthe guttata
Migut.J00932 Erythranthe guttata
MSTRG.27238 Avicennia marina
Nitab4.5_0000185g0190 Nicotiana tabacum
Oeu006074.1 Olea europaea
Oeu019420.1 Olea europaea
Oeu056339.1 Olea europaea
Peaxi162Scf00102g00085 Petunia axillaris
Peaxi162Scf00391g00715 Petunia axillaris
PGR042G3450 Punica granatum
PGR142G3629 Punica granatum
PGSC0003DMG400026212 Solanum tuberosum
Potri.003G084000 Populus trichocarpa
Prupe.5G054600 Prunus persica
Prupe.7G057100 Prunus persica
QL12p008592 Quercus lobata
RcHm_v2.0_Chr1g0328141 Rosa chinensis
RcHm_v2.0_Chr1g0328171 Rosa chinensis
RcHm_v2.0_Chr1g0372951 Rosa chinensis
RcHm_v2.0_Chr1g0372991 Rosa chinensis
Sabra03G0054600 Salix brachista
Sed0027041 Sechium edule
SGA_v2.0_scaffold91G28102 Striga asiatica
SMO111G0095 Selaginella moellendorffii
SMO134G0054 Selaginella moellendorffii
Sp6g08250 Schrenkiella parvula
TAR375G0011 Trochodendron aralioides
TAR375G0026 Trochodendron aralioides
TAR375G0484 Trochodendron aralioides
TAR375G0498 Trochodendron aralioides
TAR375G0880 Trochodendron aralioides
TAR636G0767 Trochodendron aralioides
TAR636G0884 Trochodendron aralioides
THA.LOC104809923 Tarenaya hassleriana
THA.LOC104816486 Tarenaya hassleriana
Thecc.03G144700 Theobroma cacao
Thecc.03G144800 Theobroma cacao
Thecc.03G144900 Theobroma cacao
Thecc.03G239100 Theobroma cacao
Thecc.07G180600 Theobroma cacao
Thecc.08G189000 Theobroma cacao
TWI39G0193 Tripterygium wilfordii
TWI39G0310 Tripterygium wilfordii
TWI39G0462 Tripterygium wilfordii
TWI39G0819 Tripterygium wilfordii
TWI60G0543 Tripterygium wilfordii

User provided reference genes

Program Settings