Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p13730 Brassica napus
A05p02450 Brassica napus
A05p02470 Brassica napus
A05p02480 Brassica napus
A05p02490 Brassica napus
Aa31LG2G5400 Aethionema arabicum
Aa31LG9G940 Aethionema arabicum
Actinidia05950 Actinidia chinensis
Ah.06g182110 Amaranthus hybridus
AL4G40040 Arabidopsis lyrata
AL7G49050 Arabidopsis lyrata
Aqoxy3G01382 Aquilegia oxysepala
Aqoxy4G01774 Aquilegia oxysepala
Aqoxy5G03597 Aquilegia oxysepala
Aqoxy5G03598 Aquilegia oxysepala
AT2G41730 Arabidopsis thaliana
AT5G24640 Arabidopsis thaliana
AT5G40690 Arabidopsis thaliana
AUR62020325 Chenopodium quinoa
BcaB02g07933 Brassica carinata
BcaB07g31285 Brassica carinata
BcaC04g22350 Brassica carinata
BcaNung02830 Brassica carinata
BcaNung02831 Brassica carinata
BcaNung02832 Brassica carinata
BolC4t21933H Brassica oleracea
BolC4t21934H Brassica oleracea
BolC4t21935H Brassica oleracea
BolC4t26352H Brassica oleracea
BraA04t17032Z Brassica rapa
BraA05t19239Z Brassica rapa
BraA05t19240Z Brassica rapa
BraA05t19241Z Brassica rapa
BraA05t19242Z Brassica rapa
C04p02920 Brassica napus
C04p02940 Brassica napus
C04p02950 Brassica napus
C04p47510 Brassica napus
CAN.G473.50 Capsicum annuum
CANSAT64G1789 Cannabis sativa
CANSAT64G1834 Cannabis sativa
CANSAT64G2558 Cannabis sativa
CARHR025870 Cardamine hirsuta
CARHR213820 Cardamine hirsuta
Carub.0004s2401 Capsella rubella
Carub.0006s3296 Capsella rubella
Carub.0006s3434 Capsella rubella
Carub.0007s3479 Capsella rubella
Ca_03872_v3 Cicer arietinum L.
Cc07_g00320 Coffea canephora
Ciclev10017684m.g Citrus clementina
CiPaw.03G049400 Carya illinoinensis
ClCG09G019590 Citrullus lanatus
COL.COLO4_29257 Corchorus olitorius
Cpa.g.sc130.51 Carica papaya
CsaV3_5G026800 Cucumis sativus L.
DCAR_015072 Daucus carota
DCAR_015074 Daucus carota
Dinv25704 Davidia involucrata
Duzib187G1582 Durio zibethinus
Duzib187G1586 Durio zibethinus
Duzib264G0535 Durio zibethinus
ECA232G1846 Erigeron canadensis
ECA238G3518 Erigeron canadensis
ECA238G3732 Erigeron canadensis
EL10Ac4g07679 Beta vulgaris
Eucgr.J02274 Eucalyptus grandis
FAN05G1079 Fragaria x ananassa
FAN14G0353 Fragaria x ananassa
FvH4_6g52330 Fragaria vesca
Glyma.02G190900 Glycine max
Gohir.A05G342300 Gossypium hirsutum
Gohir.A09G032000 Gossypium hirsutum
Gohir.A11G065600 Gossypium hirsutum
Gohir.D04G080420 Gossypium hirsutum
Gohir.D11G069800 Gossypium hirsutum
Gorai.006G037000 Gossypium raimondii
Gorai.007G074900 Gossypium raimondii
Gorai.012G091100 Gossypium raimondii
GSVIVG01003970001 Vitis vinifera
HanXRQChr09g0255761 Helianthus annuus
HanXRQChr14g0451031 Helianthus annuus
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla
HPP92_009915 Vanilla planifolia
HPP92_009916 Vanilla planifolia
Lsat_1_v5_gn_2_93521 Lactuca sativa
Lsat_1_v5_gn_4_184741 Lactuca sativa
Manes.15G155400 Manihot esculenta
MBI11_g29154_MAGBIO Magnolia biondii
MD09G1018600 Malus domestica
MD17G1019100 Malus domestica
Medtr1g051195 Medicago truncatula
Medtr4g061650 Medicago truncatula
MELO3C021614.2 Cucumis melo
Migut.H00046 Erythranthe guttata
Migut.K01432 Erythranthe guttata
MSTRG.24058 Avicennia marina
Nitab4.5_0000040g0600 Nicotiana tabacum
Nitab4.5_0001031g0160 Nicotiana tabacum
Nitab4.5_0001863g0220 Nicotiana tabacum
Nitab4.5_0005414g0060 Nicotiana tabacum
Nn3g16588 Nelumbo nucifera
Nn4g22470 Nelumbo nucifera
Oeu054661.1 Olea europaea
Peaxi162Scf00080g00175 Petunia axillaris
Peaxi162Scf00420g00249 Petunia axillaris
PGR083G0262 Punica granatum
PGR083G0848 Punica granatum
PGR083G1149 Punica granatum
PGSC0003DMG400006921 Solanum tuberosum
PGSC0003DMG400012626 Solanum tuberosum
Phvul.008G156900 Phaseolus vulgaris
Potri.001G336200 Populus trichocarpa
Potri.001G338100 Populus trichocarpa
Prupe.3G298500 Prunus persica
Prupe.3G298600 Prunus persica
Psat0s1368g0080 Pisum sativum
PSO017G7028 Papaver somniferum
PSO063G0264 Papaver somniferum
PSO407G0367 Papaver somniferum
PSO782G3492 Papaver somniferum
PSO832G4071 Papaver somniferum
QL02p073303 Quercus lobata
QL02p073308 Quercus lobata
RcHm_v2.0_Chr2g0173921 Rosa chinensis
Rhsim10G0012300 Rhododendron simsii
Rhsim10G0012400 Rhododendron simsii
Sabra16G0217100 Salix brachista
Sc03g0006940 Simmondsia chinensis
Sc03g0006970 Simmondsia chinensis
Sed0005342 Sechium edule
Sed0009704 Sechium edule
Sed0027888 Sechium edule
SGA_v2.0_scaffold47G17536 Striga asiatica
Solyc02g067935.1 Solanum lycopersicum
Solyc02g093710.1 Solanum lycopersicum
Sopen02g038350 Solanum pennellii
Sp4g23980 Schrenkiella parvula
Sp7g01180 Schrenkiella parvula
TAR374G1728 Trochodendron aralioides
TAR622G1038 Trochodendron aralioides
TAR625G1142 Trochodendron aralioides
THA.LOC104805351 Tarenaya hassleriana
THA.LOC104825308 Tarenaya hassleriana
Thecc.04G026300 Theobroma cacao
Thecc.04G026400 Theobroma cacao
Thhalv10019315m.g Eutrema salsugineum
Thhalv10028030m.g Eutrema salsugineum
Thhalv10028148m.g Eutrema salsugineum
TPR.G1105 Trifolium pratense
TPR.G1219 Trifolium pratense
TWI36G1179 Tripterygium wilfordii
unitig_747.g21864 Utricularia gibba
VMungo1383G1696 Vigna mungo

User provided reference genes

Program Settings