Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12560 Brassica napus
A09p60830 Brassica napus
Aa31LG7G1110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1986 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis
Actinidia18837 Actinidia chinensis
Actinidia18838 Actinidia chinensis
Actinidia18840 Actinidia chinensis
Actinidia18841 Actinidia chinensis
Actinidia35181 Actinidia chinensis
AL1G28740 Arabidopsis lyrata
AL6G51070 Arabidopsis lyrata
AL6G51100 Arabidopsis lyrata
Aqoxy113s002 Aquilegia oxysepala
Aqoxy6G02573 Aquilegia oxysepala
Aqoxy6G03019 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea
AT1G16570 Arabidopsis thaliana
ATR0739G109 Amborella trichopoda
Atru.chr9.1518 Acer truncatum
AUR62017618 Chenopodium quinoa
BcaC05g25520 Brassica carinata
BolC5t30202H Brassica oleracea
BolC8t51983H Brassica oleracea
BraA06t24419Z Brassica rapa
BraA09t41456Z Brassica rapa
C02p50710 Brassica napus
C05p14870 Brassica napus
C08p44420 Brassica napus
CAN.G960.55 Capsicum annuum
CANSAT25G0941 Cannabis sativa
CARHR017050 Cardamine hirsuta
Carub.0001s1633 Capsella rubella
Ca_03669_v3 Cicer arietinum L.
CBR_g37525 Chara braunii
Cc05_g10180 Coffea canephora
CDE04G2964 Ceratophyllum demersum
CDE06G1959 Ceratophyllum demersum
Cfa019935 Carpinus fangiana
Cfa025278 Carpinus fangiana
Ciclev10001005m.g Citrus clementina
CiPaw.01G106500 Carya illinoinensis
ClCG03G009170 Citrullus lanatus
COL.COLO4_35795 Corchorus olitorius
Cpa.g.sc132.61 Carica papaya
Cre12.g516550 Chlamydomonas reinhardtii
CsaV3_5G023450 Cucumis sativus L.
CSS0001722 Camellia sinensis var. sinensis
CSS0016238 Camellia sinensis var. sinensis
CSS0020755 Camellia sinensis var. sinensis
CSS0028761 Camellia sinensis var. sinensis
CSS0034423 Camellia sinensis var. sinensis
CSS0034904 Camellia sinensis var. sinensis
DCAR_013800 Daucus carota
Dinv13306 Davidia involucrata
Dinv26661 Davidia involucrata
Duzib187G2008 Durio zibethinus
ECA236G4460 Erigeron canadensis
EL10Ac9g22869 Beta vulgaris
Eucgr.F01412 Eucalyptus grandis
FAN04G0447 Fragaria x ananassa
FAN11G0596 Fragaria x ananassa
FAN16G0888 Fragaria x ananassa
FAN21G0297 Fragaria x ananassa
FAN21G3885 Fragaria x ananassa
FAN25G0744 Fragaria x ananassa
FvH4_3g16570 Fragaria vesca
Glyma.08G170200 Glycine max
Glyma.15G256700 Glycine max
Gohir.A09G004700 Gossypium hirsutum
Gohir.A11G220400 Gossypium hirsutum
Gohir.A11G222401 Gossypium hirsutum
Gohir.D11G203050 Gossypium hirsutum
Gohir.D11G203200 Gossypium hirsutum
Gohir.D11G203250 Gossypium hirsutum
Gorai.006G005600 Gossypium raimondii
Gorai.007G217600 Gossypium raimondii
Gorai.007G217900 Gossypium raimondii
GSVIVG01009332001 Vitis vinifera
HanXRQChr11g0329941 Helianthus annuus
Haze_08535 Corylus avellana
Haze_15516 Corylus avellana
Haze_26719 Corylus avellana
Hma1.2p1_0035F.1_g022190 Hydrangea macrophylla
HPP92_025666 Vanilla planifolia
Hund02309 Selenicereus undatus
Lalb_Chr20g0108701 Lupinus albus
Lalb_Chr25g0284911 Lupinus albus
Lj1C808G13 Lonicera japonica
Lj3g0010925 Lotus japonicus
Lj3g0015683 Lotus japonicus
Lsat_1_v5_gn_7_99701 Lactuca sativa
Manes.10G061001 Manihot esculenta
Mapoly0116s0013 Marchantia polymorpha
MCO08G055 Micromonas commoda
MD05G1209100 Malus domestica
MD10G1195500 Malus domestica
Medtr2g069330 Medicago truncatula
MELO3C022781.2 Cucumis melo
Migut.M00660 Erythranthe guttata
MSTRG.6706 Avicennia marina
Nitab4.5_0000812g0150 Nicotiana tabacum
Nitab4.5_0006279g0030 Nicotiana tabacum
Nn5g30617 Nelumbo nucifera
Oeu002771.1 Olea europaea
Oeu044427.1 Olea europaea
Os03g0180700 Oryza sativa ssp. japonica
Os06g0564800 Oryza sativa ssp. japonica
Peaxi162Scf00003g04835 Petunia axillaris
PGR004G1399 Punica granatum
PGSC0003DMG400008359 Solanum tuberosum
Phvul.005G057900 Phaseolus vulgaris
Potri.001G394300 Populus trichocarpa
Pp3c22_7820 Physcomitrium patens
PRCOL_00002569 Prasinoderma coloniale
Prupe.4G148400 Prunus persica
Psat1g012120 Pisum sativum
PSO017G0585 Papaver somniferum
PSO170G0587 Papaver somniferum
PSO528G0243 Papaver somniferum
QL04p076605 Quercus lobata
RcHm_v2.0_Chr5g0027601 Rosa chinensis
Rhsim06G0184400 Rhododendron simsii
Rhsim08G0107400 Rhododendron simsii
Sabra16G0258600 Salix brachista
SalBow5G0012 Salvia bowleyana
SalBow5G1666 Salvia bowleyana
Sc03g0007790 Simmondsia chinensis
Sed0020103 Sechium edule
SEGI_06613 Sequoiadendron giganteum
SEGI_11739 Sequoiadendron giganteum
SEGI_33737 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39778 Striga asiatica
SGA_v2.0_scaffold73G24357 Striga asiatica
SHI18054 Sapria himalayana
SHI18055 Sapria himalayana
SMO353G0172 Selaginella moellendorffii
Solyc10g078480.2 Solanum lycopersicum
Sopen10g029140 Solanum pennellii
Sp1g14730 Schrenkiella parvula
TAR376G0792 Trochodendron aralioides
TAR628G1650 Trochodendron aralioides
THA.LOC104808122 Tarenaya hassleriana
Thecc.01G135800 Theobroma cacao
Thhalv10007520m.g Eutrema salsugineum
TPR.G22508 Trifolium pratense
TPR.G9754 Trifolium pratense
TWI38G2065 Tripterygium wilfordii
unitig_62.g23080 Utricularia gibba
vmacro11217 Vaccinium macrocarpon
vmacro12019 Vaccinium macrocarpon
vmacro12020 Vaccinium macrocarpon
vmacro15157 Vaccinium macrocarpon
vmacro15158 Vaccinium macrocarpon
VMungo1080G1685 Vigna mungo
Zm00001eb005970 Zea mays
Zm00001eb049380 Zea mays
Zm00001eb180660 Zea mays
Zm00001eb307610 Zea mays
Zm00001eb401770 Zea mays
Zm00001eb421280 Zea mays

User provided reference genes

Program Settings