Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p05640 Brassica napus
A10p06390 Brassica napus
Aa31sc213G10 Aethionema arabicum
Aa31sc213G20 Aethionema arabicum
Aa31sc924G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3923 Anthoceros agrestis
Actinidia22615 Actinidia chinensis
Actinidia23262 Actinidia chinensis
Ah.01g019210 Amaranthus hybridus
AL1G53710 Arabidopsis lyrata
Aqoxy5G01271 Aquilegia oxysepala
Aqoxy6G01363 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G214E9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P974E5 Arachis hypogaea
AT1G47420 Arabidopsis thaliana
ATR0824G121 Amborella trichopoda
Atru.chr7.31 Acer truncatum
AUR62019554 Chenopodium quinoa
AUR62037877 Chenopodium quinoa
BcaB04g17525 Brassica carinata
BcaB06g26460 Brassica carinata
BcaB07g33838 Brassica carinata
BcaC07g37214 Brassica carinata
BcaC08g42948 Brassica carinata
BolC6t35323H Brassica oleracea
BolC8t47475H Brassica oleracea
BolC8t47758H Brassica oleracea
BolSC99t61278H Brassica oleracea
BraA05t20833Z Brassica rapa
BraA08t32566Z Brassica rapa
C06p01920 Brassica napus
C08p06290 Brassica napus
C08p09120 Brassica napus
CAN.G1422.6 Capsicum annuum
CAN.G371.36 Capsicum annuum
CANSAT54G1019 Cannabis sativa
CARHR037030 Cardamine hirsuta
Carub.0001s3623 Capsella rubella
Ca_13303_v3 Cicer arietinum L.
CBR_g38490 Chara braunii
Cc10_g04350 Coffea canephora
CDE01G0147 Ceratophyllum demersum
Cfa018524 Carpinus fangiana
Ciclev10002311m.g Citrus clementina
CiPaw.15G061900 Carya illinoinensis
CiPaw.16G046000 Carya illinoinensis
ClCG08G015700 Citrullus lanatus
COL.COLO4_26473 Corchorus olitorius
Cpa.g.sc8.57 Carica papaya
CsaV3_2G028080 Cucumis sativus L.
CSS0001980 Camellia sinensis var. sinensis
CSS0002613 Camellia sinensis var. sinensis
CSS0003400 Camellia sinensis var. sinensis
CSS0003579 Camellia sinensis var. sinensis
CSS0015821 Camellia sinensis var. sinensis
CSS0018141 Camellia sinensis var. sinensis
CSS0021517 Camellia sinensis var. sinensis
CSS0025487 Camellia sinensis var. sinensis
CSS0039315 Camellia sinensis var. sinensis
CSS0039327 Camellia sinensis var. sinensis
CSS0046883 Camellia sinensis var. sinensis
DCAR_015085 Daucus carota
Dinv35974 Davidia involucrata
Duzib093G0211 Durio zibethinus
Duzib116G0463 Durio zibethinus
ECA233G0805 Erigeron canadensis
ECA247G2210 Erigeron canadensis
EL10Ac7g16991 Beta vulgaris
Eucgr.F00243 Eucalyptus grandis
FAN15G0428 Fragaria x ananassa
FAN20G0125 Fragaria x ananassa
FAN27G0612 Fragaria x ananassa
FvH4_2g34650 Fragaria vesca
FvH4_2g34710 Fragaria vesca
Glyma.14G081700 Glycine max
Glyma.17G243600 Glycine max
Gohir.A06G016900 Gossypium hirsutum
Gohir.D06G015000 Gossypium hirsutum
Gorai.010G017800 Gossypium raimondii
GSVIVG01009527001 Vitis vinifera
HanXRQChr04g0103551 Helianthus annuus
Haze_17546 Corylus avellana
Haze_17555 Corylus avellana
Hma1.2p1_0982F.1_g243850 Hydrangea macrophylla
HPP92_014066 Vanilla planifolia
Lalb_Chr14g0368801 Lupinus albus
Lalb_Chr24g0399241 Lupinus albus
Lj4A775T68 Lonicera japonica
Lj5C589T2 Lonicera japonica
Lj5C9T2 Lonicera japonica
Lj5g0011335 Lotus japonicus
Lsat_1_v5_gn_0_36860 Lactuca sativa
Lsat_1_v5_gn_1_20160 Lactuca sativa
Lsat_1_v5_gn_2_117301 Lactuca sativa
Manes.05G171800 Manihot esculenta
Manes.05G171801 Manihot esculenta
Manes.18G032800 Manihot esculenta
Mapoly0033s0094 Marchantia polymorpha
MBI06_g04501_MAGBIO Magnolia biondii
MD04G1229600 Malus domestica
MD08G1103900 Malus domestica
MD15G1085100 Malus domestica
Medtr1g019810 Medicago truncatula
MELO3C010886.2 Cucumis melo
Migut.D01835 Erythranthe guttata
MSTRG.4418 Avicennia marina
MSTRG.9635 Avicennia marina
Nitab4.5_0000453g0210 Nicotiana tabacum
Nitab4.5_0000686g0020 Nicotiana tabacum
Nitab4.5_0001101g0090 Nicotiana tabacum
Nitab4.5_0004184g0030 Nicotiana tabacum
Nn1g05838 Nelumbo nucifera
Nn5g30223 Nelumbo nucifera
Nn7g38185 Nelumbo nucifera
Os04g0418000 Oryza sativa ssp. japonica
Peaxi162Scf00064g00017 Petunia axillaris
Peaxi162Scf00528g00045 Petunia axillaris
PGR031G1065 Punica granatum
PGR083G0008 Punica granatum
PGSC0003DMG400008025 Solanum tuberosum
PGSC0003DMG400015445 Solanum tuberosum
Phvul.001G020600 Phaseolus vulgaris
Potri.014G032400 Populus trichocarpa
Pp3c21_1560 Physcomitrium patens
PRCOL_00004317 Prasinoderma coloniale
Prupe.1G439200 Prunus persica
Psat6g012760 Pisum sativum
PSO063G4876 Papaver somniferum
PSO782G1589 Papaver somniferum
QL02p005410 Quercus lobata
RcHm_v2.0_Chr6g0307421 Rosa chinensis
Sabra14G0022800 Salix brachista
SalBow7G1402 Salvia bowleyana
Sc15g0006290 Simmondsia chinensis
Sed0012636 Sechium edule
SEGI_20825 Sequoiadendron giganteum
SEGI_22288 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31897 Striga asiatica
SGA_v2.0_scaffold7G04073 Striga asiatica
SGA_v2.0_scaffold7G04074 Striga asiatica
SGA_v2.0_scaffold7G04075 Striga asiatica
SMO351G0505 Selaginella moellendorffii
Solyc04g079180.3 Solanum lycopersicum
Solyc12g088900.2 Solanum lycopersicum
Sopen04g032790 Solanum pennellii
Sopen12g030800 Solanum pennellii
Sp1g34510 Schrenkiella parvula
SpUn0102_0010 Schrenkiella parvula
TAR381G0414 Trochodendron aralioides
THA.LOC104806948 Tarenaya hassleriana
THA.LOC104813205 Tarenaya hassleriana
Thecc.08G011300 Theobroma cacao
Thhalv10011700m.g Eutrema salsugineum
TPR.G13673 Trifolium pratense
TWI36G1445 Tripterygium wilfordii
TWI36G1713 Tripterygium wilfordii
unitig_21.g20460 Utricularia gibba
vmacro05293 Vaccinium macrocarpon
vmacro21541 Vaccinium macrocarpon
VMungo0647G1810 Vigna mungo
Zm00001eb053470 Zea mays
Zm00001eb217160 Zea mays

User provided reference genes

Program Settings