Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38290 Brassica napus
A06p38070 Brassica napus
A09p04970 Brassica napus
Aa31LG11G8580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2792 Anthoceros agrestis
Actinidia32805 Actinidia chinensis
Ah.04g162340 Amaranthus hybridus
AL6G40780 Arabidopsis lyrata
Aqoxy2G03510 Aquilegia oxysepala
Aqoxy5G00363 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E7WHUM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z087RK Arachis hypogaea
AT5G28750 Arabidopsis thaliana
ATR0665G151 Amborella trichopoda
Atru.chr2.818 Acer truncatum
AUR62001008 Chenopodium quinoa
BcaB04g19631 Brassica carinata
BcaC03g17750 Brassica carinata
BcaC04g23722 Brassica carinata
BcaC06g30686 Brassica carinata
BcaNung02110 Brassica carinata
BolC2t11835H Brassica oleracea
BolC7t44551H Brassica oleracea
BolC9t53465H Brassica oleracea
BraA02t08810Z Brassica rapa
BraA06t26722Z Brassica rapa
C02p57620 Brassica napus
C04p55220 Brassica napus
C07p40140 Brassica napus
C09p05370 Brassica napus
CAN.G134.95 Capsicum annuum
CARHR185320 Cardamine hirsuta
Carub.0006s2600 Capsella rubella
Ca_10045_v3 Cicer arietinum L.
CBR_g20020 Chara braunii
Cc02_g30710 Coffea canephora
CDE04G3433 Ceratophyllum demersum
CDE07G0487 Ceratophyllum demersum
CDE07G0557 Ceratophyllum demersum
Cfa006425 Carpinus fangiana
Ciclev10002770m.g Citrus clementina
CiPaw.08G123500 Carya illinoinensis
ClCG03G016400 Citrullus lanatus
COL.COLO4_00126 Corchorus olitorius
COL.COLO4_15349 Corchorus olitorius
Cpa.g.sc117.91 Carica papaya
Cre10.g438550 Chlamydomonas reinhardtii
CsaV3_1G039570 Cucumis sativus L.
DCAR_006653 Daucus carota
DCAR_009267 Daucus carota
Dinv04734 Davidia involucrata
Dinv10012 Davidia involucrata
Duzib106G1455 Durio zibethinus
Duzib177G0223 Durio zibethinus
ECA240G2961 Erigeron canadensis
ECA246G2005 Erigeron canadensis
EL10Ac4g09141 Beta vulgaris
FAN02G1710 Fragaria x ananassa
FAN05G1086 Fragaria x ananassa
FAN09G2523 Fragaria x ananassa
FAN14G0219 Fragaria x ananassa
FvH4_6g02920 Fragaria vesca
Glyma.03G247200 Glycine max
Glyma.10G162200 Glycine max
Glyma.19G244900 Glycine max
Glyma.20G224600 Glycine max
Gohir.A13G170100 Gossypium hirsutum
Gohir.D13G175500 Gossypium hirsutum
Gorai.013G200900 Gossypium raimondii
GSVIVG01021788001 Vitis vinifera
HanXRQChr05g0158351 Helianthus annuus
HanXRQChr09g0258871 Helianthus annuus
Haze_04360 Corylus avellana
Hma1.2p1_0083F.1_g042910 Hydrangea macrophylla
Hma1.2p1_0817F.1_g223110 Hydrangea macrophylla
HPP92_017518 Vanilla planifolia
Hund06970 Selenicereus undatus
Hund22096 Selenicereus undatus
Lalb_Chr02g0148831 Lupinus albus
Lalb_Chr21g0310981 Lupinus albus
Lj1g0028137 Lotus japonicus
Lj5g0014543 Lotus japonicus
Lsat_1_v5_gn_5_40280 Lactuca sativa
Lsat_1_v5_gn_8_115981 Lactuca sativa
Manes.08G134600 Manihot esculenta
Manes.09G153100 Manihot esculenta
Mapoly0001s0151 Marchantia polymorpha
MBI04_g08412_MAGBIO Magnolia biondii
MBI11_g15915_MAGBIO Magnolia biondii
MCO09G790 Micromonas commoda
MD04G1224600 Malus domestica
MD12G1241300 Malus domestica
MD16G1158600 Malus domestica
Medtr1g080910 Medicago truncatula
Medtr7g115180 Medicago truncatula
MELO3C015378.2 Cucumis melo
Migut.B01092 Erythranthe guttata
Migut.N01913 Erythranthe guttata
Migut.O00778 Erythranthe guttata
MSTRG.20447 Avicennia marina
MSTRG.28017 Avicennia marina
Nitab4.5_0000772g0110 Nicotiana tabacum
Nitab4.5_0001592g0040 Nicotiana tabacum
Nitab4.5_0003279g0050 Nicotiana tabacum
Nitab4.5_0008996g0030 Nicotiana tabacum
Nitab4.5_0013900g0010 Nicotiana tabacum
Nn1g02537 Nelumbo nucifera
Oeu016441.1 Olea europaea
Oeu027474.1 Olea europaea
Oeu038443.2 Olea europaea
Os03g0634000 Oryza sativa ssp. japonica
Peaxi162Scf00071g00832 Petunia axillaris
Peaxi162Scf00282g00419 Petunia axillaris
PGR004G0701 Punica granatum
PGSC0003DMG400019456 Solanum tuberosum
Phvul.006G101800 Phaseolus vulgaris
Potri.005G053400 Populus trichocarpa
Potri.013G040900 Populus trichocarpa
Pp3c15_9990 Physcomitrium patens
Pp3c8_14190 Physcomitrium patens
PRCOL_00005429 Prasinoderma coloniale
Prupe.6G343300 Prunus persica
Psat3g007120 Pisum sativum
Psat6g144600 Pisum sativum
PSO210G4542 Papaver somniferum
PSO210G4640 Papaver somniferum
PSO461G0019 Papaver somniferum
PSO832G3549 Papaver somniferum
QL03p025881 Quercus lobata
QL03p026586 Quercus lobata
RcHm_v2.0_Chr3g0451121 Rosa chinensis
Rhsim07G0075300 Rhododendron simsii
Sabra13G0037800 Salix brachista
SalBow8G4983 Salvia bowleyana
Sc09g0003920 Simmondsia chinensis
Sed0015873 Sechium edule
Sed0023665 Sechium edule
Sed0025331 Sechium edule
Sed0027735 Sechium edule
SEGI_08397 Sequoiadendron giganteum
SGA_v2.0_scaffold55G19806 Striga asiatica
SGA_v2.0_scaffold80G25905 Striga asiatica
SGA_v2.0_scaffold81G26090 Striga asiatica
SMO174G0006 Selaginella moellendorffii
Solyc01g097310.3 Solanum lycopersicum
Sopen01g040980 Solanum pennellii
Sopen05g019780 Solanum pennellii
Sp2g20060 Schrenkiella parvula
TAR362G1272 Trochodendron aralioides
TAR365G1136 Trochodendron aralioides
TAR633G0732 Trochodendron aralioides
THA.LOC104805820 Tarenaya hassleriana
THA.LOC104821674 Tarenaya hassleriana
Thecc.05G283400 Theobroma cacao
Thhalv10005085m.g Eutrema salsugineum
TPR.G6977 Trifolium pratense
TWI12G0609 Tripterygium wilfordii
TWI56G0209 Tripterygium wilfordii
vmacro13827 Vaccinium macrocarpon
VMungo0540G1464 Vigna mungo
Zm00001eb051040 Zea mays
Zm00001eb218840 Zea mays

User provided reference genes

Program Settings