Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33520 Brassica napus
A06p42990 Brassica napus
A09p24540 Brassica napus
Aa31LG2G6990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1886 Anthoceros agrestis
Actinidia12918 Actinidia chinensis
Ah.02g126810 Amaranthus hybridus
Ah.03g138840 Amaranthus hybridus
AL5G13460 Arabidopsis lyrata
AL5G13480 Arabidopsis lyrata
Aqoxy3G03260 Aquilegia oxysepala
Aqoxy4G03091 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E76E6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MJW4NY Arachis hypogaea
AT2G03690 Arabidopsis thaliana
ATR1120G108 Amborella trichopoda
ATR1120G192 Amborella trichopoda
Atru.chr11.1611 Acer truncatum
AUR62003087 Chenopodium quinoa
AUR62007904 Chenopodium quinoa
AUR62019674 Chenopodium quinoa
BcaB07g30287 Brassica carinata
BcaB07g30659 Brassica carinata
BcaC03g17230 Brassica carinata
BcaC06g31162 Brassica carinata
BcaC06g31172 Brassica carinata
BolC2t11249H Brassica oleracea
BolC7t43918H Brassica oleracea
C02p51640 Brassica napus
C07p34040 Brassica napus
CAN.G707.11 Capsicum annuum
CANSAT11G0637 Cannabis sativa
CANSAT64G2641 Cannabis sativa
CARHR146010 Cardamine hirsuta
Carub.0005s0281 Capsella rubella
Carub.0005s2415 Capsella rubella
Ca_08608_v3 Cicer arietinum L.
Ca_25695_v3 Cicer arietinum L.
CBR_g38753 Chara braunii
Cc06_g15640 Coffea canephora
CDE02G0376 Ceratophyllum demersum
CDE04G3031 Ceratophyllum demersum
Cfa008867 Carpinus fangiana
Cfa024149 Carpinus fangiana
Ciclev10032681m.g Citrus clementina
CiPaw.05G124200 Carya illinoinensis
ClCG08G010510 Citrullus lanatus
COL.COLO4_27864 Corchorus olitorius
Cpa.g.sc1.139 Carica papaya
Cre03.g154850 Chlamydomonas reinhardtii
CsaV3_6G033760 Cucumis sativus L.
CSS0044473 Camellia sinensis var. sinensis
DCAR_024127 Daucus carota
DCAR_026680 Daucus carota
DCAR_028902 Daucus carota
Dinv34060 Davidia involucrata
Duzib251G0565 Durio zibethinus
ECA233G2368 Erigeron canadensis
EL10Ac6g15013 Beta vulgaris
Eucgr.B03145 Eucalyptus grandis
FAN04G2106 Fragaria x ananassa
FAN07G0594 Fragaria x ananassa
FAN08G1770 Fragaria x ananassa
FAN12G0059 Fragaria x ananassa
FAN17G2847 Fragaria x ananassa
FAN22G0874 Fragaria x ananassa
FvH4_4g29830 Fragaria vesca
FvH4_5g32031 Fragaria vesca
Glyma.02G119500 Glycine max
Glyma.07G066400 Glycine max
Glyma.07G066700 Glycine max
Glyma.16G032800 Glycine max
Gohir.A03G104700 Gossypium hirsutum
Gohir.D02G129900 Gossypium hirsutum
Gorai.005G145900 Gossypium raimondii
GSVIVG01000552001 Vitis vinifera
HanXRQChr01g0013031 Helianthus annuus
HanXRQChr08g0211681 Helianthus annuus
HanXRQChr10g0298331 Helianthus annuus
HanXRQChr12g0363151 Helianthus annuus
HanXRQChr13g0414251 Helianthus annuus
Haze_11894 Corylus avellana
Hma1.2p1_0566F.1_g179870 Hydrangea macrophylla
Hund05832 Selenicereus undatus
Lalb_Chr17g0341271 Lupinus albus
Lj1g0019699 Lotus japonicus
Lj3C1029T7 Lonicera japonica
Lj6A777T47 Lonicera japonica
Lsat_1_v5_gn_8_46460 Lactuca sativa
Manes.05G109300 Manihot esculenta
Mapoly0124s0026 Marchantia polymorpha
MBI14_g37191_MAGBIO Magnolia biondii
MBI14_g45258_MAGBIO Magnolia biondii
MCO10G350 Micromonas commoda
MD13G1060600 Malus domestica
MD13G1061300 Malus domestica
MD16G1059800 Malus domestica
Medtr4g094990 Medicago truncatula
Medtr4g094998 Medicago truncatula
Medtr7g095060 Medicago truncatula
MELO3C011412.2 Cucumis melo
Migut.L01179 Erythranthe guttata
MSTRG.7738 Avicennia marina
Nitab4.5_0000231g0090 Nicotiana tabacum
Nitab4.5_0007061g0010 Nicotiana tabacum
Nn3g17119 Nelumbo nucifera
Nn4g23036 Nelumbo nucifera
Nn4g24779 Nelumbo nucifera
Oeu031535.3 Olea europaea
Os04g0674200 Oryza sativa ssp. japonica
Os05g0188800 Oryza sativa ssp. japonica
Peaxi162Scf00175g00428 Petunia axillaris
PGR083G0959 Punica granatum
PGSC0003DMG402028313 Solanum tuberosum
Phvul.007G165400 Phaseolus vulgaris
Phvul.007G165450 Phaseolus vulgaris
Phvul.010G102900 Phaseolus vulgaris
Potri.008G097100 Populus trichocarpa
Potri.010G157500 Populus trichocarpa
Pp3c2_220 Physcomitrium patens
PRCOL_00001738 Prasinoderma coloniale
Prupe.1G288800 Prunus persica
Psat3g063920 Pisum sativum
PSO017G5651 Papaver somniferum
PSO478G0010 Papaver somniferum
PSO832G2862 Papaver somniferum
QL03p073920 Quercus lobata
RcHm_v2.0_Chr4g0438081 Rosa chinensis
RcHm_v2.0_Chr7g0182561 Rosa chinensis
Rhsim09G0126300 Rhododendron simsii
Sabra08G0073300 Salix brachista
SalBow2G2941 Salvia bowleyana
SalBow4G1060 Salvia bowleyana
SalBow4G1206 Salvia bowleyana
SalBow4G1336 Salvia bowleyana
SalBow4G1755 Salvia bowleyana
SalBow4G2688 Salvia bowleyana
Sc11g0002530 Simmondsia chinensis
Sed0000590 Sechium edule
Sed0002833 Sechium edule
Sed0017877 Sechium edule
SEGI_28424 Sequoiadendron giganteum
SEGI_29941 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07803 Striga asiatica
SMO187G0002 Selaginella moellendorffii
SMO196G0238 Selaginella moellendorffii
Solyc05g012150.4 Solanum lycopersicum
Sopen05g006940 Solanum pennellii
Sp2g14510 Schrenkiella parvula
TAR622G1336 Trochodendron aralioides
THA.LOC104805201 Tarenaya hassleriana
Thecc.02G328800 Theobroma cacao
Thhalv10004874m.g Eutrema salsugineum
TPR.G29232 Trifolium pratense
TPR.G30910 Trifolium pratense
TPR.G35678 Trifolium pratense
TPR.G35682 Trifolium pratense
TWI75G0511 Tripterygium wilfordii
unitig_8.g3180 Utricularia gibba
vmacro10433 Vaccinium macrocarpon
vmacro20929 Vaccinium macrocarpon
VMungo0331G0538 Vigna mungo
Zm00001eb433530 Zea mays

User provided reference genes

Program Settings