Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02270 Brassica napus
A05p38380 Brassica napus
A10p30830 Brassica napus
Aa31LG11G6460 Aethionema arabicum
Aa31LG3G3850 Aethionema arabicum
Aa31LG3G4110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2485 Anthoceros agrestis
Ah.05g177740 Amaranthus hybridus
AL3G22380 Arabidopsis lyrata
AL6G15270 Arabidopsis lyrata
Aqoxy2G00689 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M2MMUV Arachis hypogaea
AT3G10860 Arabidopsis thaliana
AT5G05370 Arabidopsis thaliana
AUR62013781 Chenopodium quinoa
AUR62023375 Chenopodium quinoa
BcaB01g05713 Brassica carinata
BcaB04g21171 Brassica carinata
BcaB05g21720 Brassica carinata
BcaC06g32250 Brassica carinata
BolC1t05350H Brassica oleracea
BolC2t06197H Brassica oleracea
BolC5t34384H Brassica oleracea
BolC9t59895H Brassica oleracea
BraA01t04219Z Brassica rapa
BraA05t22629Z Brassica rapa
BraA10t45125Z Brassica rapa
C02p02320 Brassica napus
C05p57280 Brassica napus
C09p71330 Brassica napus
CAN.G181.27 Capsicum annuum
CAN.G874.64 Capsicum annuum
CANSAT80G1344 Cannabis sativa
CARHR085430 Cardamine hirsuta
CARHR207860 Cardamine hirsuta
Carub.0003s1010 Capsella rubella
Carub.0006s0430 Capsella rubella
CBR_g1035 Chara braunii
Cc01_g15470 Coffea canephora
Cfa009172 Carpinus fangiana
Ciclev10010097m.g Citrus clementina
Ciclev10013576m.g Citrus clementina
Ciclev10033444m.g Citrus clementina
CiPaw.05G185700 Carya illinoinensis
ClCG08G017940 Citrullus lanatus
COL.COLO4_19488 Corchorus olitorius
Cpa.g.sc2.267 Carica papaya
CsaV3_2G024700 Cucumis sativus L.
CSS0036971 Camellia sinensis var. sinensis
CSS0038074 Camellia sinensis var. sinensis
DCAR_018583 Daucus carota
DCAR_023068 Daucus carota
Duzib114G0048 Durio zibethinus
Duzib128G1816 Durio zibethinus
ECA236G4577 Erigeron canadensis
ECA248G3374 Erigeron canadensis
EL10Ac1g00726 Beta vulgaris
Eucgr.G03166 Eucalyptus grandis
FAN07G1869 Fragaria x ananassa
FAN11G0346 Fragaria x ananassa
FAN12G3281 Fragaria x ananassa
FAN16G3113 Fragaria x ananassa
FAN17G0118 Fragaria x ananassa
FAN21G2439 Fragaria x ananassa
FAN22G1549 Fragaria x ananassa
FAN25G0672 Fragaria x ananassa
FvH4_3g40960 Fragaria vesca
FvH4_4g07960 Fragaria vesca
FvH4_4g32870 Fragaria vesca
Glyma.02G237700 Glycine max
Glyma.14G206700 Glycine max
Gohir.A05G404700 Gossypium hirsutum
Gohir.A13G008200 Gossypium hirsutum
Gohir.D04G011000 Gossypium hirsutum
Gohir.D13G008800 Gossypium hirsutum
Gorai.012G013200 Gossypium raimondii
Gorai.013G009600 Gossypium raimondii
GSVIVG01024232001 Vitis vinifera
GSVIVG01024535001 Vitis vinifera
HanXRQChr05g0158631 Helianthus annuus
HanXRQChr10g0292911 Helianthus annuus
Haze_12207 Corylus avellana
Hma1.2p1_0170F.1_g075340 Hydrangea macrophylla
HPP92_000080 Vanilla planifolia
HPP92_003137 Vanilla planifolia
Lalb_Chr04g0251641 Lupinus albus
Lalb_Chr10g0103971 Lupinus albus
LjContig00141g0006354 Lotus japonicus
Lsat_1_v5_gn_5_177220 Lactuca sativa
Lsat_1_v5_gn_8_98901 Lactuca sativa
Lsat_1_v5_gn_8_98921 Lactuca sativa
Lsat_1_v5_gn_9_13340 Lactuca sativa
Manes.18G125100 Manihot esculenta
Mapoly0022s0089 Marchantia polymorpha
Mapoly0036s0032 Marchantia polymorpha
MCO15G410 Micromonas commoda
MD03G1047800 Malus domestica
MD13G1094500 Malus domestica
MD16G1095600 Malus domestica
Medtr5g075690 Medicago truncatula
MELO3C010670.2 Cucumis melo
Migut.D00804 Erythranthe guttata
Nitab4.5_0000105g0300 Nicotiana tabacum
Nitab4.5_0000311g0070 Nicotiana tabacum
Nitab4.5_0002167g0040 Nicotiana tabacum
Nitab4.5_0002902g0130 Nicotiana tabacum
Nitab4.5_0003194g0030 Nicotiana tabacum
Nn5g26793 Nelumbo nucifera
Nn5g27585 Nelumbo nucifera
Oeu007160.1 Olea europaea
Oeu025053.1 Olea europaea
Os06g0175900 Oryza sativa ssp. japonica
Os06g0177000 Oryza sativa ssp. japonica
Peaxi162Scf00131g10129 Petunia axillaris
Peaxi162Scf00455g00003 Petunia axillaris
PGR142G4161 Punica granatum
PGSC0003DMG400020649 Solanum tuberosum
PGSC0003DMG400030477 Solanum tuberosum
Phvul.008G244100 Phaseolus vulgaris
Potri.013G159700 Populus trichocarpa
Potri.019G132000 Populus trichocarpa
Pp3c11_2590 Physcomitrium patens
Pp3c13_7360 Physcomitrium patens
Pp3c1_1570 Physcomitrium patens
Pp3c7_21160 Physcomitrium patens
PRCOL_00006067 Prasinoderma coloniale
Prupe.1G250900 Prunus persica
Prupe.6G038800 Prunus persica
QL03p059558 Quercus lobata
RcHm_v2.0_Chr4g0441891 Rosa chinensis
RcHm_v2.0_Chr5g0073771 Rosa chinensis
SalBow3G4275 Salvia bowleyana
Sc15g0002370 Simmondsia chinensis
Sed0004860 Sechium edule
SEGI_31881 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33334 Striga asiatica
SGA_v2.0_scaffold129G34161 Striga asiatica
SHI19278 Sapria himalayana
SMO117G0077 Selaginella moellendorffii
Solyc06g007540.3 Solanum lycopersicum
Solyc06g082680.4 Solanum lycopersicum
Sopen06g002450 Solanum pennellii
Sopen06g034070 Solanum pennellii
Sp3g09180 Schrenkiella parvula
Sp6g37450 Schrenkiella parvula
Sp6g37680 Schrenkiella parvula
TAR369G0568 Trochodendron aralioides
TAR633G0676 Trochodendron aralioides
THA.LOC104816504 Tarenaya hassleriana
THA.LOC104823167 Tarenaya hassleriana
THA.LOC104823179 Tarenaya hassleriana
THA.LOC109117202 Tarenaya hassleriana
Thecc.10G186500 Theobroma cacao
Thhalv10015196m.g Eutrema salsugineum
Thhalv10015197m.g Eutrema salsugineum
Thhalv10021877m.g Eutrema salsugineum
TPR.G7542 Trifolium pratense
TWI09G0083 Tripterygium wilfordii
TWI53G1180 Tripterygium wilfordii
vmacro02862 Vaccinium macrocarpon
VMungo0647G0523 Vigna mungo
Zm00001eb281780 Zea mays
Zm00001eb375180 Zea mays

User provided reference genes

Program Settings