Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p55160 Brassica napus
Aa31LG5G9370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis
Ah.09g229630 Amaranthus hybridus
AL4G19340 Arabidopsis lyrata
Aqoxy6G00936 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea
AT2G26500 Arabidopsis thaliana
ATR0733G197 Amborella trichopoda
Atru.BG.71.p Acer truncatum
AUR62033874 Chenopodium quinoa
AUR62040093 Chenopodium quinoa
BcaB01g03018 Brassica carinata
BcaB08g35304 Brassica carinata
BcaC07g40816 Brassica carinata
BolC8t51384H Brassica oleracea
BraA09t40924Z Brassica rapa
C08p38090 Brassica napus
CAN.G322.84 Capsicum annuum
CAN.G820.2 Capsicum annuum
CANSAT25G3863 Cannabis sativa
CARHR118500 Cardamine hirsuta
Carub.0004s0666 Capsella rubella
Ca_12477_v3 Cicer arietinum L.
CBR_g48936 Chara braunii
Cc02_g18220 Coffea canephora
CDE01G0191 Ceratophyllum demersum
Cfa004944 Carpinus fangiana
Cfa018482 Carpinus fangiana
Ciclev10030439m.g Citrus clementina
CiPaw.05G058500 Carya illinoinensis
CiPaw.16G051700 Carya illinoinensis
ClCG02G005540 Citrullus lanatus
COL.COLO4_17768 Corchorus olitorius
COL.COLO4_26416 Corchorus olitorius
Cpa.g.sc64.17 Carica papaya
CsaV3_7G010090 Cucumis sativus L.
CSS0016442 Camellia sinensis var. sinensis
CSS0020304 Camellia sinensis var. sinensis
CSS0032006 Camellia sinensis var. sinensis
DCAR_000094 Daucus carota
DCAR_001610 Daucus carota
DCAR_029046 Daucus carota
Dinv36015 Davidia involucrata
Duzib052G1120 Durio zibethinus
Duzib132G0841 Durio zibethinus
Duzib248G0127 Durio zibethinus
Duzib248G0675 Durio zibethinus
Duzib248G1645 Durio zibethinus
ECA236G2461 Erigeron canadensis
EL10Ac1g01755 Beta vulgaris
Eucgr.G01518 Eucalyptus grandis
Eucgr.I01216 Eucalyptus grandis
FAN03G2535 Fragaria x ananassa
FAN06G3575 Fragaria x ananassa
FAN06G4461 Fragaria x ananassa
FAN08G2377 Fragaria x ananassa
FAN10G0172 Fragaria x ananassa
FAN15G0910 Fragaria x ananassa
FAN19G2330 Fragaria x ananassa
FAN20G1062 Fragaria x ananassa
FAN23G2994 Fragaria x ananassa
FAN24G3543 Fragaria x ananassa
FAN26G1198 Fragaria x ananassa
FAN27G3490 Fragaria x ananassa
FAN28G0470 Fragaria x ananassa
FAN28G0922 Fragaria x ananassa
FvH4_1g27200 Fragaria vesca
FvH4_2g07330 Fragaria vesca
FvH4_7g04430 Fragaria vesca
Glyma.04G035900 Glycine max
Glyma.06G035900 Glycine max
Glyma.07G163600 Glycine max
Glyma.20G008600 Glycine max
Gohir.A01G181900 Gossypium hirsutum
Gohir.A03G214500 Gossypium hirsutum
Gohir.D01G173000 Gossypium hirsutum
Gohir.D02G236000 Gossypium hirsutum
Gorai.002G214600 Gossypium raimondii
Gorai.005G264100 Gossypium raimondii
Gorai.010G015700 Gossypium raimondii
GSVIVG01009587001 Vitis vinifera
HanXRQChr04g0128391 Helianthus annuus
HanXRQChr16g0506081 Helianthus annuus
Hma1.2p1_0584F.1_g183220 Hydrangea macrophylla
Hma1.2p1_1527F.1_g289065 Hydrangea macrophylla
HPP92_017776 Vanilla planifolia
Lalb_Chr01g0003011 Lupinus albus
Lalb_Chr08g0245721 Lupinus albus
Lalb_Chr10g0095391 Lupinus albus
Lalb_Chr11g0062471 Lupinus albus
Lj1g0026402 Lotus japonicus
Lsat_1_v5_gn_7_88020 Lactuca sativa
Manes.05G168800 Manihot esculenta
Manes.15G145400 Manihot esculenta
Mapoly0043s0110 Marchantia polymorpha
MBI16_g31481_MAGBIO Magnolia biondii
MD05G1072400 Malus domestica
MD10G1086700 Malus domestica
Medtr1g034260 Medicago truncatula
MELO3C018419.2 Cucumis melo
Migut.B00292 Erythranthe guttata
MSTRG.20123 Avicennia marina
Nitab4.5_0001401g0180 Nicotiana tabacum
Nitab4.5_0008194g0060 Nicotiana tabacum
Nn5g29406 Nelumbo nucifera
Nn6g32144 Nelumbo nucifera
Oeu034076.1 Olea europaea
Os03g0765900 Oryza sativa ssp. japonica
Peaxi162Scf00016g01338 Petunia axillaris
Peaxi162Scf00684g00563 Petunia axillaris
PGR042G3241 Punica granatum
PGSC0003DMG400006208 Solanum tuberosum
PGSC0003DMG402025831 Solanum tuberosum
Phvul.003G011200 Phaseolus vulgaris
Phvul.009G061900 Phaseolus vulgaris
Potri.002G130000 Populus trichocarpa
Potri.004G147300 Populus trichocarpa
Potri.009G108700 Populus trichocarpa
Potri.014G037000 Populus trichocarpa
Pp3c5_10730 Physcomitrium patens
Pp3c6_20300 Physcomitrium patens
Prupe.8G112900 Prunus persica
Psat3g122680 Pisum sativum
Psat4g068600 Pisum sativum
Psat6g097040 Pisum sativum
PSO170G0356 Papaver somniferum
PSO541G0781 Papaver somniferum
QL03p018404 Quercus lobata
QL11p039202 Quercus lobata
RcHm_v2.0_Chr3g0487591 Rosa chinensis
Rhsim05G0079000 Rhododendron simsii
Sabra09G0082900 Salix brachista
Sabra14G0026600 Salix brachista
SalBow6G5992 Salvia bowleyana
Sc15g0006590 Simmondsia chinensis
Sed0011034 Sechium edule
SEGI_27588 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20597 Striga asiatica
SMO361G0239 Selaginella moellendorffii
Solyc01g109040.4 Solanum lycopersicum
Sopen01g051240 Solanum pennellii
Sopen10g022090 Solanum pennellii
Sp4g07480 Schrenkiella parvula
TAR376G0986 Trochodendron aralioides
TAR625G0696 Trochodendron aralioides
THA.LOC104803691 Tarenaya hassleriana
Thecc.02G028000 Theobroma cacao
Thecc.08G017000 Theobroma cacao
Thhalv10001257m.g Eutrema salsugineum
TPR.G40836 Trifolium pratense
TWI12G0249 Tripterygium wilfordii
TWI36G1636 Tripterygium wilfordii
TWI56G1138 Tripterygium wilfordii
unitig_0.g849 Utricularia gibba
unitig_21.g20762 Utricularia gibba
unitig_744.g24243 Utricularia gibba
VMungo1215G1405 Vigna mungo
VMungo1309G1869 Vigna mungo
Zm00001eb058590 Zea mays
Zm00001eb214080 Zea mays

User provided reference genes

Program Settings