Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p41010 Brassica napus
A09p03460 Brassica napus
Aa31LG2G5030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1179 Anthoceros agrestis
Actinidia02508 Actinidia chinensis
Actinidia06000 Actinidia chinensis
Actinidia36112 Actinidia chinensis
Actinidia36128 Actinidia chinensis
Actinidia39417 Actinidia chinensis
Ah.04g166060 Amaranthus hybridus
AL5G17060 Arabidopsis lyrata
Aqoxy5G03803 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5LAL7M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86LGQR Arachis hypogaea
AT3G27640 Arabidopsis thaliana
ATR0585G118 Amborella trichopoda
Atru.chr6.2286 Acer truncatum
AUR62015863 Chenopodium quinoa
AUR62020360 Chenopodium quinoa
BcaC04g23897 Brassica carinata
BcaC06g30967 Brassica carinata
BcaC06g30968 Brassica carinata
BcaC06g33792 Brassica carinata
BcaC07g40676 Brassica carinata
BolC7t44196H Brassica oleracea
BolC9t53288H Brassica oleracea
BraA06t27020Z Brassica rapa
BraA09t35984Z Brassica rapa
C07p36830 Brassica napus
C09p03680 Brassica napus
CANSAT64G0389 Cannabis sativa
CARHR149060 Cardamine hirsuta
Carub.0005s0608 Capsella rubella
Ca_04167_v3 Cicer arietinum L.
Ca_04168_v3 Cicer arietinum L.
Ca_11629_v3 Cicer arietinum L.
Ca_30239_v3 Cicer arietinum L.
CBR_g29535 Chara braunii
Cc07_g01760 Coffea canephora
CDE06G2157 Ceratophyllum demersum
CDE07G1779 Ceratophyllum demersum
Cfa007374 Carpinus fangiana
Cfa023913 Carpinus fangiana
Ciclev10014954m.g Citrus clementina
CiPaw.03G043200 Carya illinoinensis
ClCG10G013910 Citrullus lanatus
COL.COLO4_29103 Corchorus olitorius
Cpa.g.sc108.64 Carica papaya
Cre01.g036100 Chlamydomonas reinhardtii
CsaV3_3G042780 Cucumis sativus L.
CSS0006108 Camellia sinensis var. sinensis
CSS0036222 Camellia sinensis var. sinensis
DCAR_001447 Daucus carota
DCAR_021718 Daucus carota
Dinv33445 Davidia involucrata
Duzib147G0401 Durio zibethinus
EL10Ac4g07711 Beta vulgaris
Eucgr.J02238 Eucalyptus grandis
FAN02G3912 Fragaria x ananassa
FAN05G0117 Fragaria x ananassa
FAN09G3114 Fragaria x ananassa
FAN14G1865 Fragaria x ananassa
FvH4_6g51280 Fragaria vesca
Glyma.05G004600 Glycine max
Glyma.19G005200 Glycine max
Gohir.A07G222800 Gossypium hirsutum
Gohir.A11G066200 Gossypium hirsutum
Gohir.D05G342900 Gossypium hirsutum
Gohir.D07G229500 Gossypium hirsutum
Gohir.D11G070400 Gossypium hirsutum
Gohir.D11G341000 Gossypium hirsutum
Gorai.001G264600 Gossypium raimondii
Gorai.007G075500 Gossypium raimondii
Gorai.009G369300 Gossypium raimondii
Gorai.009G369500 Gossypium raimondii
GSVIVG01032413001 Vitis vinifera
HanXRQChr15g0474741 Helianthus annuus
HanXRQChr15g0474761 Helianthus annuus
HanXRQChr15g0474771 Helianthus annuus
HanXRQChr15g0475331 Helianthus annuus
HanXRQChr17g0548511 Helianthus annuus
Haze_14735 Corylus avellana
Hma1.2p1_0933F.1_g238470 Hydrangea macrophylla
Hma1.2p1_1291F.1_g273490 Hydrangea macrophylla
HPP92_006408 Vanilla planifolia
Hund23207 Selenicereus undatus
Lalb_Chr06g0175761 Lupinus albus
Lj2g0022197 Lotus japonicus
Lj7A599T80 Lonicera japonica
Lsat_1_v5_gn_0_39820 Lactuca sativa
Lsat_1_v5_gn_2_60041 Lactuca sativa
Lsat_1_v5_gn_7_15321 Lactuca sativa
Manes.15G150000 Manihot esculenta
Manes.17G112600 Manihot esculenta
Mapoly0154s0005 Marchantia polymorpha
MBI16_g23842_MAGBIO Magnolia biondii
MCO05G657 Micromonas commoda
MCO11G225 Micromonas commoda
MD09G1027800 Malus domestica
MD17G1027700 Malus domestica
MD17G1028100 Malus domestica
MD17G1028200 Malus domestica
Medtr6g005220 Medicago truncatula
Medtr6g005920 Medicago truncatula
MELO3C026578.2 Cucumis melo
Migut.H00080 Erythranthe guttata
MSTRG.24035 Avicennia marina
Nitab4.5_0002682g0120 Nicotiana tabacum
Nitab4.5_0005022g0020 Nicotiana tabacum
Nitab4.5_0006802g0040 Nicotiana tabacum
Nitab4.5_0007892g0010 Nicotiana tabacum
Nn4g22656 Nelumbo nucifera
Oeu054620.1 Olea europaea
Oeu057061.2 Olea europaea
Os03g0699100 Oryza sativa ssp. japonica
Peaxi162Scf00129g01540 Petunia axillaris
PGR083G0256 Punica granatum
PGSC0003DMG400012630 Solanum tuberosum
Phvul.004G010500 Phaseolus vulgaris
Phvul.007G112800 Phaseolus vulgaris
Potri.001G345400 Populus trichocarpa
Pp3c15_21840 Physcomitrium patens
PRCOL_00001418 Prasinoderma coloniale
Prupe.3G290400 Prunus persica
Prupe.3G291000 Prunus persica
Psat1g054840 Pisum sativum
PSO063G4583 Papaver somniferum
PSO832G3302 Papaver somniferum
QL02p074814 Quercus lobata
RcHm_v2.0_Chr2g0172901 Rosa chinensis
Rhsim10G0017900 Rhododendron simsii
Sabra16G0224400 Salix brachista
SalBow1G5144 Salvia bowleyana
Sc11g0004050 Simmondsia chinensis
Sed0006302 Sechium edule
Sed0019384 Sechium edule
SEGI_04633 Sequoiadendron giganteum
SEGI_08021 Sequoiadendron giganteum
SEGI_22179 Sequoiadendron giganteum
SEGI_23942 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34904 Striga asiatica
SGA_v2.0_scaffold481G52308 Striga asiatica
SHI16376 Sapria himalayana
SHI16377 Sapria himalayana
SHI16383 Sapria himalayana
Solyc02g086470.3 Solanum lycopersicum
Sopen02g031190 Solanum pennellii
Sp2g16770 Schrenkiella parvula
TAR374G1586 Trochodendron aralioides
THA.LOC104805372 Tarenaya hassleriana
Thecc.04G016500 Theobroma cacao
Thhalv10004025m.g Eutrema salsugineum
TPR.G14088 Trifolium pratense
TPR.G6018 Trifolium pratense
TWI12G1386 Tripterygium wilfordii
unitig_60.g25509 Utricularia gibba
vmacro05857 Vaccinium macrocarpon
VMungo0464G0678 Vigna mungo
VMungo0464G2048 Vigna mungo
Zm00001eb015370 Zea mays
Zm00001eb053910 Zea mays
Zm00001eb216890 Zea mays
Zm00001eb381450 Zea mays

User provided reference genes

Program Settings