Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis
Ah.11g043620 Amaranthus hybridus
Ah.11g043630 Amaranthus hybridus
Aqoxy2G04068 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea
ATR1147G022 Amborella trichopoda
Atru.chr7.972_Atru.chr7.973 Acer truncatum
Atru.chr9.1488 Acer truncatum
Atru.chr9.1512 Acer truncatum
AUR62020716 Chenopodium quinoa
AUR62020718 Chenopodium quinoa
AUR62020720 Chenopodium quinoa
AUR62020721 Chenopodium quinoa
AUR62027997 Chenopodium quinoa
AUR62027998 Chenopodium quinoa
AUR62028000 Chenopodium quinoa
AUR62028001 Chenopodium quinoa
AUR62028003 Chenopodium quinoa
AUR62028004 Chenopodium quinoa
AUR62028006 Chenopodium quinoa
CAN.G1581.2 Capsicum annuum
CAN.G1581.3 Capsicum annuum
CANSAT80G0643 Cannabis sativa
CANSAT80G1931 Cannabis sativa
Ca_20811_v3 Cicer arietinum L.
CBR_g2798 Chara braunii
Cc00_g00420 Coffea canephora
Cc00_g00450 Coffea canephora
CDE06G1657 Ceratophyllum demersum
CDE06G1948 Ceratophyllum demersum
Cfa020737 Carpinus fangiana
CiPaw.15G156000 Carya illinoinensis
ClCG06G014050 Citrullus lanatus
ClCG06G014070 Citrullus lanatus
COL.COLO4_24913 Corchorus olitorius
Cpa.g.sc123.30 Carica papaya
Cpa.g.sc123.31 Carica papaya
Cpa.g.sc123.32 Carica papaya
Cpa.g.sc123.33 Carica papaya
Cre02.g105150 Chlamydomonas reinhardtii
CsaV3_1G004600 Cucumis sativus L.
CsaV3_2G035400 Cucumis sativus L.
CSS0002376 Camellia sinensis var. sinensis
DCAR_023663 Daucus carota
Dinv26468 Davidia involucrata
Duzib168G1467 Durio zibethinus
ECA240G2514 Erigeron canadensis
ECA240G4307 Erigeron canadensis
EL10Ac2g03630 Beta vulgaris
EL10Ac2g03631 Beta vulgaris
EL10Ac2g03632 Beta vulgaris
EL10Ac2g03633 Beta vulgaris
EL10Ac2g03634 Beta vulgaris
EL10Ac2g04866 Beta vulgaris
EL10Ac2g04868 Beta vulgaris
EL10Ac6g13794 Beta vulgaris
EL10As1g23108 Beta vulgaris
Eucgr.C02022 Eucalyptus grandis
FAN07G2444 Fragaria x ananassa
FAN12G0289 Fragaria x ananassa
FAN17G2530 Fragaria x ananassa
FAN22G1494 Fragaria x ananassa
FvH4_4g06230 Fragaria vesca
Glyma.12G049000 Glycine max
Gohir.A05G001100 Gossypium hirsutum
Gohir.D05G001400 Gossypium hirsutum
Gorai.009G001300 Gossypium raimondii
GSVIVG01026776001 Vitis vinifera
HanXRQChr03g0067221 Helianthus annuus
HanXRQChr03g0067331 Helianthus annuus
HanXRQChr03g0067391 Helianthus annuus
Haze_18802 Corylus avellana
Haze_19053 Corylus avellana
Haze_19054 Corylus avellana
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla
HPP92_003174 Vanilla planifolia
Hund03234 Selenicereus undatus
Lalb_Chr19g0138471 Lupinus albus
Lj3g0012868 Lotus japonicus
Lsat_1_v5_gn_7_57600 Lactuca sativa
Manes.03G078300 Manihot esculenta
Manes.03G078400 Manihot esculenta
Mapoly0055s0075 Marchantia polymorpha
MBI11_g07424_MAGBIO Magnolia biondii
MD16G1239400 Malus domestica
Medtr4g068230 Medicago truncatula
Medtr4g068240 Medicago truncatula
Medtr4g068270 Medicago truncatula
Medtr4g117010 Medicago truncatula
Medtr5g096240 Medicago truncatula
MELO3C017386.2 Cucumis melo
MELO3C019214.2 Cucumis melo
Migut.B00849 Erythranthe guttata
Migut.L00391 Erythranthe guttata
Migut.L00572 Erythranthe guttata
Migut.L01912 Erythranthe guttata
MSTRG.10464 Avicennia marina
Nitab4.5_0000413g0040 Nicotiana tabacum
Nitab4.5_0001205g0010 Nicotiana tabacum
Nn1g09800 Nelumbo nucifera
Oeu000968.1 Olea europaea
Oeu028831.1 Olea europaea
Peaxi162Scf00320g00316 Petunia axillaris
Peaxi162Scf00320g00317 Petunia axillaris
Peaxi162Scf00320g00411 Petunia axillaris
Peaxi162Scf00320g00412 Petunia axillaris
PGR142G0778 Punica granatum
PGSC0003DMG400007349 Solanum tuberosum
PGSC0003DMG400021019 Solanum tuberosum
PGSC0003DMG400022081 Solanum tuberosum
Phvul.011G051100 Phaseolus vulgaris
Phvul.011G051300 Phaseolus vulgaris
Phvul.011G051400 Phaseolus vulgaris
Potri.018G138206 Populus trichocarpa
Potri.018G145600 Populus trichocarpa
Pp3c15_21680 Physcomitrium patens
PRCOL_00000420 Prasinoderma coloniale
Prupe.1G065500 Prunus persica
Psat0s5298g0040 Pisum sativum
Psat0s8631g0040 Pisum sativum
QL11p009243 Quercus lobata
RcHm_v2.0_Chr4g0397891 Rosa chinensis
RcHm_v2.0_Chr4g0397951 Rosa chinensis
Rhsim01G0218300 Rhododendron simsii
Rhsim03G0268600 Rhododendron simsii
Rhsim05G0069600 Rhododendron simsii
RhsimUnG0051500 Rhododendron simsii
Sabra18G0119900 Salix brachista
SalBow5G2207 Salvia bowleyana
Sc06g0001470 Simmondsia chinensis
Sed0010048 Sechium edule
Sed0010902 Sechium edule
Sed0013454 Sechium edule
Sed0018057 Sechium edule
SEGI_12293 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09621 Striga asiatica
SGA_v2.0_scaffold21G09624 Striga asiatica
Solyc07g015980.4 Solanum lycopersicum
Solyc07g016020.1 Solanum lycopersicum
Solyc07g016030.1 Solanum lycopersicum
Solyc07g016040.3 Solanum lycopersicum
Solyc07g016050.3 Solanum lycopersicum
Solyc07g016080.4 Solanum lycopersicum
Solyc07g032590.1 Solanum lycopersicum
Sopen00g013700 Solanum pennellii
Sopen07g005830 Solanum pennellii
Sopen07g016620 Solanum pennellii
Sopen07g016630 Solanum pennellii
TAR624G0419 Trochodendron aralioides
TAR626G1477 Trochodendron aralioides
TAR626G1834 Trochodendron aralioides
Thecc.09G194100 Theobroma cacao
TPR.G10229 Trifolium pratense
TPR.G34194 Trifolium pratense
TPR.G34256 Trifolium pratense
TWI32G0217 Tripterygium wilfordii
unitig_578.g16395 Utricularia gibba
unitig_578.g16396 Utricularia gibba
vmacro22292 Vaccinium macrocarpon
VMungo1127G1209 Vigna mungo
VMungo1127G2221 Vigna mungo
Zm00001eb064440 Zea mays

User provided reference genes

Program Settings