Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00660 Brassica napus
A03p04760 Brassica napus
Aa31LG3G16320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2778 Anthoceros agrestis
Actinidia10531 Actinidia chinensis
Actinidia14139 Actinidia chinensis
Ah.12g060630 Amaranthus hybridus
AL6G21360 Arabidopsis lyrata
Aqoxy7G03322 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.54XXT5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76P32W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90HH72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5PPFL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5C21C Arachis hypogaea
AT5G10780 Arabidopsis thaliana
ATR0580G398 Amborella trichopoda
Atru.chr7.2584 Acer truncatum
Atru.chr7.2585 Acer truncatum
AUR62024788 Chenopodium quinoa
AUR62032433 Chenopodium quinoa
BcaB01g05499 Brassica carinata
BcaB01g06278 Brassica carinata
BcaB05g21506 Brassica carinata
BcaC03g13332 Brassica carinata
BcaNung06638 Brassica carinata
BolC2t06425H Brassica oleracea
BolC3t13057H Brassica oleracea
BolC3t15641H Brassica oleracea
BraA02t05050Z Brassica rapa
BraA03t09816Z Brassica rapa
C02p04660 Brassica napus
C03p05470 Brassica napus
C03p33160 Brassica napus
CAN.G285.20 Capsicum annuum
CANSAT64G0435 Cannabis sativa
CARHR202520 Cardamine hirsuta
Carub.0006s0928 Capsella rubella
Ca_13075_v3 Cicer arietinum L.
CBR_g29297 Chara braunii
Cc00_g24580 Coffea canephora
CDE02G0236 Ceratophyllum demersum
CDE05G2494 Ceratophyllum demersum
Cfa024789 Carpinus fangiana
Ciclev10009603m.g Citrus clementina
CiPaw.07G231900 Carya illinoinensis
CiPaw.08G004800 Carya illinoinensis
ClCG05G016150 Citrullus lanatus
Cpa.g.sc148.37 Carica papaya
Cre07.g351700 Chlamydomonas reinhardtii
CsaV3_4G036420 Cucumis sativus L.
CSS0012906 Camellia sinensis var. sinensis
CSS0013447 Camellia sinensis var. sinensis
CSS0025027 Camellia sinensis var. sinensis
CSS0026414 Camellia sinensis var. sinensis
CSS0047262 Camellia sinensis var. sinensis
DCAR_003054 Daucus carota
DCAR_031730 Daucus carota
Dinv01903 Davidia involucrata
Dinv10290 Davidia involucrata
Duzib168G1681 Durio zibethinus
Duzib187G0841 Durio zibethinus
ECA233G1452 Erigeron canadensis
ECA238G1890 Erigeron canadensis
EL10Ac2g02480 Beta vulgaris
Eucgr.C04036 Eucalyptus grandis
FAN02G2967 Fragaria x ananassa
FAN05G0819 Fragaria x ananassa
FAN14G2933 Fragaria x ananassa
FAN16G3501 Fragaria x ananassa
FAN21G1236 Fragaria x ananassa
FvH4_3g24420 Fragaria vesca
FvH4_6g27370 Fragaria vesca
Glyma.14G103800 Glycine max
Glyma.17G222100 Glycine max
Gohir.A05G061400 Gossypium hirsutum
Gohir.D05G063900 Gossypium hirsutum
Gohir.D06G105600 Gossypium hirsutum
Gorai.009G064600 Gossypium raimondii
Gorai.010G120200 Gossypium raimondii
GSVIVG01035992001 Vitis vinifera
HanXRQChr07g0201211 Helianthus annuus
HanXRQChr12g0370101 Helianthus annuus
Haze_21384 Corylus avellana
Hma1.2p1_0355F.1_g133920 Hydrangea macrophylla
HPP92_021944 Vanilla planifolia
HPP92_021971 Vanilla planifolia
Hund25610 Selenicereus undatus
Lalb_Chr01g0013281 Lupinus albus
Lalb_Chr10g0093521 Lupinus albus
Lalb_Chr15g0078021 Lupinus albus
Lalb_Chr15g0080471 Lupinus albus
Lalb_Chr24g0401921 Lupinus albus
Lj6g0009294 Lotus japonicus
Lj7A737G42 Lonicera japonica
Lsat_1_v5_gn_8_16540 Lactuca sativa
Manes.03G007300 Manihot esculenta
Manes.16G131700 Manihot esculenta
Mapoly0039s0015 Marchantia polymorpha
MBI14_g31383_MAGBIO Magnolia biondii
MCO09G762 Micromonas commoda
MD03G1162600 Malus domestica
MD08G1052600 Malus domestica
MD10G1133700 Malus domestica
MD10G1176800 Malus domestica
MD15G1042900 Malus domestica
Medtr1g013660 Medicago truncatula
MELO3C016948.2 Cucumis melo
Migut.A00383 Erythranthe guttata
Migut.E01443 Erythranthe guttata
MSTRG.13961 Avicennia marina
Nitab4.5_0000264g0060 Nicotiana tabacum
Nitab4.5_0001362g0040 Nicotiana tabacum
Nn1g03128 Nelumbo nucifera
Nn3g19885 Nelumbo nucifera
Oeu010290.1 Olea europaea
Oeu021906.1 Olea europaea
Oeu048647.1 Olea europaea
Os03g0360500 Oryza sativa ssp. japonica
Peaxi162Scf00045g01943 Petunia axillaris
PGR044G2662 Punica granatum
PGSC0003DMG400026285 Solanum tuberosum
Phvul.001G042400 Phaseolus vulgaris
Potri.006G266300 Populus trichocarpa
Potri.018G016800 Populus trichocarpa
Pp3c18_15950 Physcomitrium patens
PRCOL_00000905 Prasinoderma coloniale
Prupe.1G396200 Prunus persica
Psat6g025120 Pisum sativum
PSO017G0706 Papaver somniferum
PSO170G1218 Papaver somniferum
QL02p018464 Quercus lobata
RcHm_v2.0_Chr3g0494951 Rosa chinensis
RcHm_v2.0_Chr6g0299241 Rosa chinensis
Rhsim07G0166500 Rhododendron simsii
Sabra06G0208900 Salix brachista
Sabra18G0020200 Salix brachista
SalBow8G1520 Salvia bowleyana
Sc23g0006160 Simmondsia chinensis
Sed0009310 Sechium edule
Sed0012000 Sechium edule
SEGI_36915 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38599 Striga asiatica
SGA_v2.0_scaffold4G02162 Striga asiatica
SMO367G0045 Selaginella moellendorffii
Solyc08g006650.3 Solanum lycopersicum
Sopen08g002600 Solanum pennellii
Sp6g32680 Schrenkiella parvula
TAR383G0062 Trochodendron aralioides
TAR383G0705 Trochodendron aralioides
TAR625G0171 Trochodendron aralioides
TAR625G1552 Trochodendron aralioides
THA.LOC104799028 Tarenaya hassleriana
THA.LOC104824960 Tarenaya hassleriana
Thecc.09G012700 Theobroma cacao
Thhalv10014802m.g Eutrema salsugineum
TPR.G38877 Trifolium pratense
TWI32G1179 Tripterygium wilfordii
TWI34G1410 Tripterygium wilfordii
unitig_32.g11121 Utricularia gibba
vmacro05117 Vaccinium macrocarpon
vmacro11269 Vaccinium macrocarpon
VMungo0647G1739 Vigna mungo
Zm00001eb394360 Zea mays

User provided reference genes

Program Settings