Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27840 Brassica napus
Aa31LG8G7690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.691 Anthoceros agrestis
Actinidia16315 Actinidia chinensis
Ah.06g193660 Amaranthus hybridus
AL3G34820 Arabidopsis lyrata
Aqoxy7G00799 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0JWP28 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9W75VL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BUZ3KN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E88S00 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H592TP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LPI13M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N626J4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T21L4I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6H5I3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XL2GL1 Arachis hypogaea
AT3G20870 Arabidopsis thaliana
ATR0605G196 Amborella trichopoda
Atru.chr3.2598 Acer truncatum
AUR62000098 Chenopodium quinoa
AUR62019272 Chenopodium quinoa
BcaC05g28200 Brassica carinata
BolC5t33048H Brassica oleracea
BraA05t21671Z Brassica rapa
C05p43180 Brassica napus
CAN.G71.8 Capsicum annuum
CANSAT35G1357 Cannabis sativa
CARHR096750 Cardamine hirsuta
Carub.0003s2085 Capsella rubella
Ca_01288_v3 Cicer arietinum L.
Ca_20572_v3 Cicer arietinum L.
Ca_30507_v3 Cicer arietinum L.
CBR_g19660 Chara braunii
CBR_g35021 Chara braunii
CBR_g37790 Chara braunii
CBR_g37792 Chara braunii
Cc06_g22560 Coffea canephora
CDE10G0019 Ceratophyllum demersum
Cfa009743 Carpinus fangiana
Ciclev10016213m.g Citrus clementina
CiPaw.13G163200 Carya illinoinensis
CiPaw.14G121000 Carya illinoinensis
ClCG02G023360 Citrullus lanatus
COL.COLO4_24848 Corchorus olitorius
Cpa.g.sc84.75 Carica papaya
Cre01.g066187 Chlamydomonas reinhardtii
Cre03.g189550 Chlamydomonas reinhardtii
Cre09.g392060 Chlamydomonas reinhardtii
Cre12.g530350 Chlamydomonas reinhardtii
Cre12.g530400 Chlamydomonas reinhardtii
CsaV3_4G024140 Cucumis sativus L.
CSS0020783 Camellia sinensis var. sinensis
DCAR_031567 Daucus carota
Dinv08032 Davidia involucrata
Dinv36273 Davidia involucrata
Dinv36275 Davidia involucrata
Duzib150G0594 Durio zibethinus
Duzib168G0673 Durio zibethinus
ECA233G0542 Erigeron canadensis
EL10Ac4g10297 Beta vulgaris
Eucgr.J00789 Eucalyptus grandis
FAN11G3745 Fragaria x ananassa
FAN16G2672 Fragaria x ananassa
FAN21G3999 Fragaria x ananassa
FAN25G0848 Fragaria x ananassa
FvH4_3g43050 Fragaria vesca
Glyma.08G063100 Glycine max
Glyma.11G132500 Glycine max
Glyma.12G056900 Glycine max
Glyma.13G340900 Glycine max
Glyma.15G033500 Glycine max
Gohir.A08G013200 Gossypium hirsutum
Gohir.D08G023600 Gossypium hirsutum
Gohir.D11G292000 Gossypium hirsutum
Gorai.004G018900 Gossypium raimondii
Gorai.007G316100 Gossypium raimondii
GSVIVG01025302001 Vitis vinifera
HanXRQChr02g0056281 Helianthus annuus
HanXRQChr17g0534131 Helianthus annuus
Haze_23102 Corylus avellana
Hma1.2p1_0118F.1_g056480 Hydrangea macrophylla
HPP92_020510 Vanilla planifolia
Hund22064 Selenicereus undatus
Lalb_Chr19g0138141 Lupinus albus
Lalb_Chr22g0352331 Lupinus albus
Lj1A348T17 Lonicera japonica
Lj3g0004330 Lotus japonicus
Lj3g0009499 Lotus japonicus
Lsat_1_v5_gn_6_48200 Lactuca sativa
Manes.06G166500 Manihot esculenta
Mapoly0039s0091 Marchantia polymorpha
MBI01_g27615_MAGBIO Magnolia biondii
MBI04_g13625_MAGBIO Magnolia biondii
MBI09_g41969_MAGBIO Magnolia biondii
MCO07G169 Micromonas commoda
MCO07G525 Micromonas commoda
MD03G1024300 Malus domestica
MD11G1029400 Malus domestica
Medtr2g098150 Medicago truncatula
Medtr4g065640 Medicago truncatula
MELO3C014607.2 Cucumis melo
Migut.D00582 Erythranthe guttata
Migut.O00580 Erythranthe guttata
MSTRG.18417 Avicennia marina
MSTRG.21390 Avicennia marina
MSTRG.21391 Avicennia marina
Nitab4.5_0000492g0060 Nicotiana tabacum
Nitab4.5_0002026g0030 Nicotiana tabacum
Nn2g15439 Nelumbo nucifera
Nn7g36163 Nelumbo nucifera
Oeu035739.1 Olea europaea
Oeu052046.2 Olea europaea
Os02g0196000 Oryza sativa ssp. japonica
Os08g0100200 Oryza sativa ssp. japonica
Peaxi162Scf00029g02914 Petunia axillaris
Phvul.011G058500 Phaseolus vulgaris
Phvul.L011443 Phaseolus vulgaris
Potri.001G018800 Populus trichocarpa
Potri.003G205100 Populus trichocarpa
Pp3c16_16530 Physcomitrium patens
PRCOL_00002167 Prasinoderma coloniale
PRCOL_00005627 Prasinoderma coloniale
Prupe.6G023700 Prunus persica
Psat1g173960 Pisum sativum
Psat5g287120 Pisum sativum
Psat5g287160 Pisum sativum
Psat7g213080 Pisum sativum
PSO210G5188 Papaver somniferum
PSO210G6888 Papaver somniferum
QL01p005255 Quercus lobata
RcHm_v2.0_Chr5g0077111 Rosa chinensis
Rhsim13G0223400 Rhododendron simsii
Rhsim13G0223600 Rhododendron simsii
Sabra01G0013400 Salix brachista
Sabra03G0151600 Salix brachista
Sc06g0004510 Simmondsia chinensis
Sed0000340 Sechium edule
SEGI_07837 Sequoiadendron giganteum
SGA_v2.0_scaffold247G44855 Striga asiatica
SMO347G0569 Selaginella moellendorffii
Solyc11g062020.2 Solanum lycopersicum
Sopen11g023990 Solanum pennellii
Sp3g18900 Schrenkiella parvula
TAR369G0770 Trochodendron aralioides
TAR623G1292 Trochodendron aralioides
TAR636G1592 Trochodendron aralioides
THA.LOC104817902 Tarenaya hassleriana
Thecc.09G228300 Theobroma cacao
Thhalv10021300m.g Eutrema salsugineum
TPR.G33171 Trifolium pratense
TPR.G35036 Trifolium pratense
TPR.G39903 Trifolium pratense
TPR.G6819 Trifolium pratense
TWI34G1572 Tripterygium wilfordii
TWI60G0262 Tripterygium wilfordii
unitig_26.g10132 Utricularia gibba
unitig_26.g10133 Utricularia gibba
vmacro04193 Vaccinium macrocarpon
VMungo1080G0554 Vigna mungo
VMungo1127G1882 Vigna mungo
Zm00001eb205960 Zea mays
Zm00001eb213530 Zea mays

User provided reference genes

Program Settings