Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23810 Brassica napus
Actinidia08802 Actinidia chinensis
Actinidia15991 Actinidia chinensis
AL2G41390 Arabidopsis lyrata
Aqoxy7G03687 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.131LTR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4DH38B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4K2N5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WW0PRH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YHK00Y Arachis hypogaea
AT1G80133 Arabidopsis thaliana
Atru.chr1.2986 Acer truncatum
Atru.chr7.1137 Acer truncatum
AUR62016345 Chenopodium quinoa
BcaB05g25296 Brassica carinata
BolC2t09767H Brassica oleracea
BraA02t07372Z Brassica rapa
C02p37550 Brassica napus
CANSAT56G1089 Cannabis sativa
CARHR074360 Cardamine hirsuta
Carub.0002s2738 Capsella rubella
Cc04_g04300 Coffea canephora
Cfa003389 Carpinus fangiana
Ciclev10010462m.g Citrus clementina
Ciclev10010639m.g Citrus clementina
Ciclev10027032m.g Citrus clementina
CiPaw.02G156500 Carya illinoinensis
CiPaw.03G245200 Carya illinoinensis
CiPaw.04G172300 Carya illinoinensis
ClCG06G011240 Citrullus lanatus
ClCG07G012630 Citrullus lanatus
ClCG09G002880 Citrullus lanatus
COL.COLO4_12954 Corchorus olitorius
COL.COLO4_18855 Corchorus olitorius
Cpa.g.sc10.259 Carica papaya
CsaV3_1G030270 Cucumis sativus L.
CsaV3_4G001570 Cucumis sativus L.
CsaV3_7G032450 Cucumis sativus L.
CSS0000383 Camellia sinensis var. sinensis
CSS0018376 Camellia sinensis var. sinensis
CSS0024700 Camellia sinensis var. sinensis
DCAR_014889 Daucus carota
DCAR_025508 Daucus carota
Duzib168G0259 Durio zibethinus
Duzib187G0465 Durio zibethinus
Duzib192G0219 Durio zibethinus
Duzib235G0719 Durio zibethinus
EL10Ac9g21909 Beta vulgaris
Eucgr.C01743 Eucalyptus grandis
Eucgr.F03867 Eucalyptus grandis
Eucgr.L02713 Eucalyptus grandis
FAN02G0226 Fragaria x ananassa
FAN05G0070 Fragaria x ananassa
FAN09G2661 Fragaria x ananassa
FAN14G0452 Fragaria x ananassa
FAN17G1709 Fragaria x ananassa
FAN23G1202 Fragaria x ananassa
FAN23G2903 Fragaria x ananassa
FAN26G3437 Fragaria x ananassa
FAN28G1543 Fragaria x ananassa
FvH4_1g03100 Fragaria vesca
FvH4_6g29870 Fragaria vesca
Glyma.07G030700 Glycine max
Glyma.08G212100 Glycine max
Glyma.15G008000 Glycine max
Glyma.17G113800 Glycine max
Gohir.A05G015700 Gossypium hirsutum
Gohir.A10G074000 Gossypium hirsutum
Gohir.D05G016800 Gossypium hirsutum
Gohir.D10G075800 Gossypium hirsutum
Gorai.009G017000 Gossypium raimondii
Gorai.011G083500 Gossypium raimondii
HanXRQChr06g0169201 Helianthus annuus
HanXRQChr12g0361431 Helianthus annuus
Haze_25560 Corylus avellana
Hma1.2p1_0042F.1_g025560 Hydrangea macrophylla
Hund06564 Selenicereus undatus
Lalb_Chr04g0262391 Lupinus albus
Lalb_Chr07g0179021 Lupinus albus
Lalb_Chr12g0197991 Lupinus albus
Lalb_Chr13g0301791 Lupinus albus
Lalb_Chr22g0350861 Lupinus albus
Lj3g0013777 Lotus japonicus
Lj4g0010177 Lotus japonicus
Lsat_1_v5_gn_5_132021 Lactuca sativa
Manes.04G113532 Manihot esculenta
Manes.11G055900 Manihot esculenta
Manes.14G121900 Manihot esculenta
MBI01_g38638_MAGBIO Magnolia biondii
MBI04_g29349_MAGBIO Magnolia biondii
MBI04_g47848_MAGBIO Magnolia biondii
MD02G1030200 Malus domestica
MD15G1171700 Malus domestica
MD17G1210000 Malus domestica
Medtr2g103780 Medicago truncatula
Medtr4g010300 Medicago truncatula
Medtr4g114660 Medicago truncatula
MELO3C017882.2 Cucumis melo
MELO3C029250.2 Cucumis melo
Migut.D01070 Erythranthe guttata
Migut.I00774 Erythranthe guttata
MSTRG.11136 Avicennia marina
MSTRG.9427 Avicennia marina
Nitab4.5_0000209g0140 Nicotiana tabacum
Nitab4.5_0001597g0040 Nicotiana tabacum
Nitab4.5_0005728g0040 Nicotiana tabacum
Nitab4.5_0006708g0030 Nicotiana tabacum
Nitab4.5_0007793g0030 Nicotiana tabacum
Nn2g12051 Nelumbo nucifera
Nn8g39475 Nelumbo nucifera
Peaxi162Scf00046g00719 Petunia axillaris
Peaxi162Scf00332g00733 Petunia axillaris
Peaxi162Scf00785g00321 Petunia axillaris
PGR102G3274 Punica granatum
PGSC0003DMG400030926 Solanum tuberosum
PGSC0003DMG401021955 Solanum tuberosum
Phvul.003G165600 Phaseolus vulgaris
Phvul.005G177700 Phaseolus vulgaris
Phvul.010G155400 Phaseolus vulgaris
Potri.018G130700 Populus trichocarpa
Prupe.3G085300 Prunus persica
Prupe.7G036700 Prunus persica
Prupe.7G244400 Prunus persica
Psat5g302160 Pisum sativum
Psat7g256400 Pisum sativum
PSO135G0759 Papaver somniferum
PSO339G4098 Papaver somniferum
PSO724G0030 Papaver somniferum
QL02p088712 Quercus lobata
QL05p029537 Quercus lobata
RcHm_v2.0_Chr2g0088241 Rosa chinensis
RcHm_v2.0_Chr2g0135761 Rosa chinensis
Rhsim08G0213700 Rhododendron simsii
Rhsim12G0191800 Rhododendron simsii
Sabra06G0050900 Salix brachista
SalBow2G2996 Salvia bowleyana
SalBow6G6427 Salvia bowleyana
Sed0013123 Sechium edule
Sed0015199 Sechium edule
Sed0016032 Sechium edule
Sed0018633 Sechium edule
Sed0020577 Sechium edule
Sed0025536 Sechium edule
SEGI_35416 Sequoiadendron giganteum
Solyc03g116650.3 Solanum lycopersicum
Solyc07g008205.1 Solanum lycopersicum
Solyc08g015940.3 Solanum lycopersicum
Sopen08g006200 Solanum pennellii
TAR383G0091 Trochodendron aralioides
Thecc.06G022000 Theobroma cacao
Thecc.09G025200 Theobroma cacao
Thecc.09G128000 Theobroma cacao
Thhalv10019808m.g Eutrema salsugineum
TPR.G26481 Trifolium pratense
TPR.G37291 Trifolium pratense
TPR.G38692 Trifolium pratense
TWI12G0794 Tripterygium wilfordii
TWI75G1822 Tripterygium wilfordii
unitig_0.g1118 Utricularia gibba
unitig_61.g26235 Utricularia gibba
unitig_744.g24019 Utricularia gibba
VMungo0331G0688 Vigna mungo
VMungo1215G1478 Vigna mungo

User provided reference genes

Program Settings