Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p35620 Brassica napus
A10p06030 Brassica napus
A10p33400 Brassica napus
Aa31LG1G22520 Aethionema arabicum
Aa31LG1G6940 Aethionema arabicum
Actinidia05322 Actinidia chinensis
Ah.16g102460 Amaranthus hybridus
AL1G17680 Arabidopsis lyrata
AL3G43490 Arabidopsis lyrata
AL6G11450 Arabidopsis lyrata
AL8G23740 Arabidopsis lyrata
Aqoxy1G00904 Aquilegia oxysepala
AT1G07500 Arabidopsis thaliana
AT5G02220 Arabidopsis thaliana
ATR0559G371 Amborella trichopoda
Atru.chr12.419 Acer truncatum
Atru.chr3.3970 Acer truncatum
Atru.chr8.1996 Acer truncatum
BcaB02g06736 Brassica carinata
BcaB03g13391 Brassica carinata
BcaC05g24693 Brassica carinata
BcaNung06028 Brassica carinata
BolC2t06039H Brassica oleracea
BolC5t29323H Brassica oleracea
BolC8t47109H Brassica oleracea
BolC9t60164H Brassica oleracea
BraA02t04711Z Brassica rapa
BraA08t35468Z Brassica rapa
BraA10t42865Z Brassica rapa
BraA10t45371Z Brassica rapa
C02p00390 Brassica napus
C05p05520 Brassica napus
C08p03110 Brassica napus
C09p74310 Brassica napus
CAN.G394.69 Capsicum annuum
CANSAT11G2039 Cannabis sativa
CARHR211160 Cardamine hirsuta
Carub.0001s0682 Capsella rubella
Carub.0006s0106 Capsella rubella
Cc01_g13170 Coffea canephora
Cfa001453 Carpinus fangiana
Cfa010547 Carpinus fangiana
Cfa017356 Carpinus fangiana
Cfa021240 Carpinus fangiana
Ciclev10029728m.g Citrus clementina
CiPaw.01G289300 Carya illinoinensis
CiPaw.09G194900 Carya illinoinensis
CiPaw.13G091200 Carya illinoinensis
CiPaw.15G088800 Carya illinoinensis
ClCG07G003460 Citrullus lanatus
ClCG10G021220 Citrullus lanatus
COL.COLO4_14778 Corchorus olitorius
COL.COLO4_18555 Corchorus olitorius
Cpa.g.c34680 Carica papaya
Cpa.g.sc81.114 Carica papaya
CsaV3_3G034820 Cucumis sativus L.
CsaV3_4G025140 Cucumis sativus L.
CsaV3_5G008200 Cucumis sativus L.
DCAR_007435 Daucus carota
DCAR_027604 Daucus carota
Duzib106G0317 Durio zibethinus
Duzib150G1613 Durio zibethinus
EL10Ac2g04727 Beta vulgaris
EL10Ac7g16049 Beta vulgaris
Eucgr.B02319 Eucalyptus grandis
Eucgr.J01238 Eucalyptus grandis
Eucgr.K03114 Eucalyptus grandis
FAN02G2532 Fragaria x ananassa
FAN05G2794 Fragaria x ananassa
FAN09G0389 Fragaria x ananassa
FAN09G4335 Fragaria x ananassa
FAN14G0518 Fragaria x ananassa
FvH4_6g13440 Fragaria vesca
Glyma.02G248800 Glycine max
Glyma.14G067700 Glycine max
Gohir.A04G083300 Gossypium hirsutum
Gohir.A05G094000 Gossypium hirsutum
Gohir.A09G154800 Gossypium hirsutum
Gohir.D04G122000 Gossypium hirsutum
Gohir.D05G094500 Gossypium hirsutum
Gohir.D09G150300 Gossypium hirsutum
Gorai.006G171600 Gossypium raimondii
Gorai.009G097700 Gossypium raimondii
Gorai.012G104900 Gossypium raimondii
HanXRQChr08g0220931 Helianthus annuus
Haze_17088 Corylus avellana
Haze_20817 Corylus avellana
Hma1.2p1_0936F.1_g238880 Hydrangea macrophylla
Hma1.2p1_1785F.1_g302220 Hydrangea macrophylla
Hma1.2p1_1889F.1_g306650 Hydrangea macrophylla
Hma1.2p1_2197F.1_g316913 Hydrangea macrophylla
HPP92_019243 Vanilla planifolia
Lalb_Chr03g0042351 Lupinus albus
Lalb_Chr14g0375161 Lupinus albus
Lj3g0010706 Lotus japonicus
LjContig00141g0021725 Lotus japonicus
Lsat_1_v5_gn_2_118420 Lactuca sativa
Lsat_1_v5_gn_5_169301 Lactuca sativa
Lsat_1_v5_gn_8_15240 Lactuca sativa
Manes.02G130300 Manihot esculenta
Manes.07G117700 Manihot esculenta
Manes.09G092400 Manihot esculenta
Manes.10G028900 Manihot esculenta
MBI14_g04662_MAGBIO Magnolia biondii
MD03G1088000 Malus domestica
MD04G1131100 Malus domestica
MD11G1097200 Malus domestica
MD12G1144200 Malus domestica
Medtr5g080040 Medicago truncatula
Medtr5g080060 Medicago truncatula
MELO3C003142.2 Cucumis melo
MELO3C009251.2 Cucumis melo
MELO3C023871.2 Cucumis melo
Migut.F00765 Erythranthe guttata
Migut.L01954 Erythranthe guttata
Nitab4.5_0000647g0080 Nicotiana tabacum
Nitab4.5_0001326g0030 Nicotiana tabacum
Nitab4.5_0016190g0010 Nicotiana tabacum
Nn2g11160 Nelumbo nucifera
Nn2g13398 Nelumbo nucifera
Oeu001860.2 Olea europaea
Oeu026714.1 Olea europaea
Os01g0843700 Oryza sativa ssp. japonica
Os03g0822400 Oryza sativa ssp. japonica
Peaxi162Scf00774g00035 Petunia axillaris
PGR004G0648 Punica granatum
PGR042G1454 Punica granatum
PGSC0003DMG400027224 Solanum tuberosum
PGSC0003DMG400030326 Solanum tuberosum
Phvul.008G231900 Phaseolus vulgaris
Potri.008G057600 Populus trichocarpa
Potri.009G034001 Populus trichocarpa
Potri.010G201900 Populus trichocarpa
Potri.016G100000 Populus trichocarpa
Prupe.6G072300 Prunus persica
Prupe.6G257600 Prunus persica
QL01p030934 Quercus lobata
QL07p048809 Quercus lobata
RcHm_v2.0_Chr3g0466321 Rosa chinensis
Rhsim01G0230700 Rhododendron simsii
Rhsim03G0224900 Rhododendron simsii
Rhsim04G0158600 Rhododendron simsii
Sc01g0004440 Simmondsia chinensis
Sed0010480 Sechium edule
Sed0017148 Sechium edule
Solyc05g053050.1 Solanum lycopersicum
Solyc06g076310.1 Solanum lycopersicum
Sopen05g031570 Solanum pennellii
Sopen06g032730 Solanum pennellii
Sp1g06230 Schrenkiella parvula
Sp6g40230 Schrenkiella parvula
TAR623G0224 Trochodendron aralioides
TAR633G2336 Trochodendron aralioides
TAR636G3128 Trochodendron aralioides
THA.LOC109116790 Tarenaya hassleriana
THA.LOC109117261 Tarenaya hassleriana
THA.LOC109117276 Tarenaya hassleriana
Thecc.05G037100 Theobroma cacao
Thecc.09G318100 Theobroma cacao
Thhalv10015202m.g Eutrema salsugineum
TWI74G0654 Tripterygium wilfordii
Zm00001eb148250 Zea mays
Zm00001eb211640 Zea mays

User provided reference genes

Program Settings