Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03590 Brassica napus
A04p31330 Brassica napus
A09p49750 Brassica napus
Aa31LG10G11730 Aethionema arabicum
Actinidia37863 Actinidia chinensis
Ah.04g150390 Amaranthus hybridus
Ah.13g077330 Amaranthus hybridus
AL4G38990 Arabidopsis lyrata
AL5G38270 Arabidopsis lyrata
Aqoxy2G00033 Aquilegia oxysepala
AT2G41010 Arabidopsis thaliana
AT3G56880 Arabidopsis thaliana
ATR1096G063 Amborella trichopoda
Atru.chr1.1512 Acer truncatum
AUR62018430 Chenopodium quinoa
AUR62021003 Chenopodium quinoa
BcaB02g08344 Brassica carinata
BcaC02g09876 Brassica carinata
BcaC02g12869 Brassica carinata
BcaC02g12874 Brassica carinata
BcaC07g40000 Brassica carinata
BcaC07g40111 Brassica carinata
BolC4t25239H Brassica oleracea
BolC4t28378H Brassica oleracea
BolC8t50831H Brassica oleracea
BraA04t16076Z Brassica rapa
BraA04t18590Z Brassica rapa
BraA09t40428Z Brassica rapa
C04p35650 Brassica napus
C04p68730 Brassica napus
C08p32120 Brassica napus
CAN.G128.96 Capsicum annuum
CAN.G959.22 Capsicum annuum
CANSAT80G1482 Cannabis sativa
CARHR136130 Cardamine hirsuta
CARHR167030 Cardamine hirsuta
Carub.0004s2334 Capsella rubella
Carub.0005s2361 Capsella rubella
Ca_08356_v3 Cicer arietinum L.
Cc00_g08990 Coffea canephora
CDE02G4522 Ceratophyllum demersum
CDE04G0994 Ceratophyllum demersum
CDE08G1070 Ceratophyllum demersum
CDE09G1065 Ceratophyllum demersum
Cfa019946 Carpinus fangiana
Ciclev10012618m.g Citrus clementina
CiPaw.09G052400 Carya illinoinensis
CiPaw.10G044100 Carya illinoinensis
CiPaw.12G092400 Carya illinoinensis
ClCG10G016480 Citrullus lanatus
Cpa.g.sc33.191 Carica papaya
CsaV3_3G039860 Cucumis sativus L.
CSS0041918 Camellia sinensis var. sinensis
DCAR_013523 Daucus carota
DCAR_020610 Daucus carota
Dinv06038 Davidia involucrata
Duzib106G1975 Durio zibethinus
Duzib128G0931 Durio zibethinus
ECA236G2438 Erigeron canadensis
EL10Ac3g07333 Beta vulgaris
Eucgr.A02182 Eucalyptus grandis
Eucgr.K01686 Eucalyptus grandis
FAN09G2868 Fragaria x ananassa
FvH4_6g07790 Fragaria vesca
Glyma.03G120700 Glycine max
Glyma.19G125300 Glycine max
Gohir.A01G192900 Gossypium hirsutum
Gohir.A11G305500 Gossypium hirsutum
Gohir.A11G305600 Gossypium hirsutum
Gohir.D01G183200 Gossypium hirsutum
Gohir.D11G320900 Gossypium hirsutum
Gohir.D11G321000 Gossypium hirsutum
Gorai.002G226300 Gossypium raimondii
Gorai.007G351100 Gossypium raimondii
Gorai.007G351200 Gossypium raimondii
HanXRQChr03g0086901 Helianthus annuus
HanXRQChr09g0258571 Helianthus annuus
Haze_20292 Corylus avellana
HPP92_012446 Vanilla planifolia
HPP92_014347 Vanilla planifolia
HPP92_028455 Vanilla planifolia
HPP92_028709 Vanilla planifolia
Lalb_Chr14g0365411 Lupinus albus
Lalb_Chr22g0357981 Lupinus albus
Lalb_Chr24g0400611 Lupinus albus
Lj1g0025044 Lotus japonicus
Lsat_1_v5_gn_8_109221 Lactuca sativa
Manes.08G065900 Manihot esculenta
Manes.09G001100 Manihot esculenta
MBI13_g13129_MAGBIO Magnolia biondii
MD04G1191900 Malus domestica
Medtr7g088620 Medicago truncatula
MELO3C009728.2 Cucumis melo
Migut.J01607 Erythranthe guttata
Migut.K00167 Erythranthe guttata
MSTRG.10776 Avicennia marina
MSTRG.19768 Avicennia marina
MSTRG.26187 Avicennia marina
MSTRG.6296 Avicennia marina
Nitab4.5_0000062g0280 Nicotiana tabacum
Nitab4.5_0000123g0220 Nicotiana tabacum
Nitab4.5_0001270g0170 Nicotiana tabacum
Nn1g03499 Nelumbo nucifera
Nn3g18300 Nelumbo nucifera
Nn7g37071 Nelumbo nucifera
Oeu009515.1 Olea europaea
Oeu023004.1 Olea europaea
Oeu034749.1 Olea europaea
Oeu034750.1 Olea europaea
Oeu044231.1 Olea europaea
Oeu057811.1 Olea europaea
Oeu060762.1 Olea europaea
Os01g0278000 Oryza sativa ssp. japonica
Os11g0131100 Oryza sativa ssp. japonica
Os12g0127800 Oryza sativa ssp. japonica
Peaxi162Scf00003g05315 Petunia axillaris
Peaxi162Scf00607g00054 Petunia axillaris
PGR042G0777 Punica granatum
PGR142G3989 Punica granatum
PGSC0003DMG400007200 Solanum tuberosum
PGSC0003DMG400028198 Solanum tuberosum
Phvul.001G116900 Phaseolus vulgaris
Phvul.002G069001 Phaseolus vulgaris
Potri.006G032300 Populus trichocarpa
Potri.016G029600 Populus trichocarpa
Prupe.6G310500 Prunus persica
Psat0ss9348g0120 Pisum sativum
PSO339G3328 Papaver somniferum
PSO384G0208 Papaver somniferum
QL07p014155 Quercus lobata
RcHm_v2.0_Chr3g0457501 Rosa chinensis
RhsimUnG0020900 Rhododendron simsii
Sabra06G0021600 Salix brachista
Sabra16G0033500 Salix brachista
SalBow1G6186 Salvia bowleyana
SalBow6G6868 Salvia bowleyana
Sc19g0007900 Simmondsia chinensis
Sc25g0005580 Simmondsia chinensis
Sed0018866 Sechium edule
SEGI_18240 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30551 Striga asiatica
SGA_v2.0_scaffold66G22309 Striga asiatica
SGA_v2.0_scaffold69G23192 Striga asiatica
SHI12275 Sapria himalayana
Solyc10g077130.1 Solanum lycopersicum
Sopen10g028810 Solanum pennellii
Sopen10g031550 Solanum pennellii
Sp4g23330 Schrenkiella parvula
Sp5g05710 Schrenkiella parvula
TAR623G1559 Trochodendron aralioides
THA.LOC104803243 Tarenaya hassleriana
THA.LOC104815333 Tarenaya hassleriana
THA.LOC104824387 Tarenaya hassleriana
Thecc.05G119700 Theobroma cacao
Thhalv10006505m.g Eutrema salsugineum
Thhalv10017173m.g Eutrema salsugineum
TPR.G22743 Trifolium pratense
TWI53G1196 Tripterygium wilfordii
TWI74G0038 Tripterygium wilfordii
unitig_21.g20674 Utricularia gibba
unitig_744.g24165 Utricularia gibba
unitig_744.g24166 Utricularia gibba
VMungo1383G1978 Vigna mungo
Zm00001eb128970 Zea mays

User provided reference genes

Program Settings