Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12590 Brassica napus
A03p52710 Brassica napus
A08p15200 Brassica napus
Aa31LG6G3240 Aethionema arabicum
Actinidia05535 Actinidia chinensis
Actinidia11836 Actinidia chinensis
Actinidia14236 Actinidia chinensis
Actinidia26950 Actinidia chinensis
Ah.09g235360 Amaranthus hybridus
Ah.14g088180 Amaranthus hybridus
AL7G32890 Arabidopsis lyrata
Aqoxy4G01997 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F31F99 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QUZ1HU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFZ90Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y6FWJK Arachis hypogaea
AT4G21215 Arabidopsis thaliana
Atru.chr10.2143 Acer truncatum
AUR62022017 Chenopodium quinoa
BcaB03g11696 Brassica carinata
BcaC01g00706 Brassica carinata
BcaC06g30659 Brassica carinata
BcaC09g51243 Brassica carinata
BcaNung00863 Brassica carinata
BcaNung03832 Brassica carinata
BolC1t01465H Brassica oleracea
BolC3t20622H Brassica oleracea
BolC7t45614H Brassica oleracea
BraA01t01202Z Brassica rapa
BraA03t14345Z Brassica rapa
BraA08t33498Z Brassica rapa
C01p15160 Brassica napus
C03p83440 Brassica napus
C07p51140 Brassica napus
CAN.G569.44 Capsicum annuum
CANSAT56G2280 Cannabis sativa
CARHR227810 Cardamine hirsuta
Carub.0007s2020 Capsella rubella
Cc00_g17930 Coffea canephora
Cfa000279 Carpinus fangiana
Ciclev10016643m.g Citrus clementina
CiPaw.09G086700 Carya illinoinensis
CiPaw.10G068100 Carya illinoinensis
ClCG01G022190 Citrullus lanatus
ClCG03G005000 Citrullus lanatus
COL.COLO4_31721 Corchorus olitorius
Cpa.g.sc198.2 Carica papaya
CsaV3_1G011080 Cucumis sativus L.
CsaV3_6G049270 Cucumis sativus L.
CSS0034427 Camellia sinensis var. sinensis
CSS0045436 Camellia sinensis var. sinensis
DCAR_004190 Daucus carota
DCAR_008122 Daucus carota
Dinv17836 Davidia involucrata
Dinv20012 Davidia involucrata
Duzib192G0487 Durio zibethinus
Duzib235G0682 Durio zibethinus
ECA248G1765 Erigeron canadensis
EL10Ac8g19901 Beta vulgaris
Eucgr.D00816 Eucalyptus grandis
FAN21G0156 Fragaria x ananassa
FAN25G3407 Fragaria x ananassa
FvH4_3g02690 Fragaria vesca
Glyma.01G240500 Glycine max
Glyma.10G252400 Glycine max
Glyma.11G003100 Glycine max
Glyma.20G141000 Glycine max
Gohir.A05G312801 Gossypium hirsutum
Gohir.A06G145600 Gossypium hirsutum
Gohir.A06G208100 Gossypium hirsutum
Gohir.A10G015500 Gossypium hirsutum
Gohir.D06G151500 Gossypium hirsutum
Gohir.D06G213000 Gossypium hirsutum
Gohir.D10G015500 Gossypium hirsutum
Gorai.010G176700 Gossypium raimondii
Gorai.010G253100 Gossypium raimondii
Gorai.011G017100 Gossypium raimondii
GSVIVG01012625001 Vitis vinifera
HanXRQChr01g0002531 Helianthus annuus
HanXRQChr11g0339041 Helianthus annuus
HanXRQChr16g0516371 Helianthus annuus
Haze_06732 Corylus avellana
Haze_06736 Corylus avellana
Hma1.2p1_0091F.1_g046140 Hydrangea macrophylla
Hund21376 Selenicereus undatus
Hund23516 Selenicereus undatus
Lalb_Chr02g0144581 Lupinus albus
Lalb_Chr16g0376351 Lupinus albus
Lalb_Chr21g0307851 Lupinus albus
Lj1g0002529 Lotus japonicus
Lj2E274T2 Lonicera japonica
Lj5g0000713 Lotus japonicus
Lsat_1_v5_gn_1_123061 Lactuca sativa
Lsat_1_v5_gn_4_57760 Lactuca sativa
Manes.16G012800 Manihot esculenta
Manes.17G034800 Manihot esculenta
MBI02_g10098_MAGBIO Magnolia biondii
MBI18_g06808_MAGBIO Magnolia biondii
MD05G1340800 Malus domestica
MD10G1314300 Malus domestica
Medtr1g105555 Medicago truncatula
Medtr5g005560 Medicago truncatula
MELO3C002485.2 Cucumis melo
MELO3C032917.2 Cucumis melo
Migut.M01277 Erythranthe guttata
MSTRG.13161 Avicennia marina
MSTRG.15964 Avicennia marina
MSTRG.7243 Avicennia marina
Nitab4.5_0001686g0040 Nicotiana tabacum
Nitab4.5_0002847g0010 Nicotiana tabacum
Nitab4.5_0003738g0040 Nicotiana tabacum
Nitab4.5_0006795g0040 Nicotiana tabacum
Nn1g03641 Nelumbo nucifera
Nn1g07023 Nelumbo nucifera
Oeu002714.1 Olea europaea
Oeu026856.1 Olea europaea
Oeu030986.1 Olea europaea
Oeu051227.1 Olea europaea
Peaxi162Scf00082g00177 Petunia axillaris
Peaxi162Scf00678g00313 Petunia axillaris
PGR004G2667 Punica granatum
PGSC0003DMG400002067 Solanum tuberosum
Phvul.002G049100 Phaseolus vulgaris
Phvul.007G051800 Phaseolus vulgaris
Phvul.008G132100 Phaseolus vulgaris
Potri.004G023000 Populus trichocarpa
Potri.011G026900 Populus trichocarpa
Prupe.4G026600 Prunus persica
Psat4g215200 Pisum sativum
Psat6g210400 Pisum sativum
PSO675G1253 Papaver somniferum
QL05p075222 Quercus lobata
RcHm_v2.0_Chr5g0004031 Rosa chinensis
Rhsim02G0112300 Rhododendron simsii
Sabra04G0012700 Salix brachista
Sabra11G0017100 Salix brachista
SalBow1G7297 Salvia bowleyana
Sc05g0008860 Simmondsia chinensis
Sc17g0007070 Simmondsia chinensis
Sed0009826 Sechium edule
Sed0010653 Sechium edule
Sed0011498 Sechium edule
SGA_v2.0_scaffold114G32021 Striga asiatica
SGA_v2.0_scaffold7G03885 Striga asiatica
Solyc02g080110.3 Solanum lycopersicum
Sopen02g024830 Solanum pennellii
Sopen10g001370 Solanum pennellii
Sp7g19310 Schrenkiella parvula
TAR626G1160 Trochodendron aralioides
TAR629G1557 Trochodendron aralioides
THA.LOC104806260 Tarenaya hassleriana
THA.LOC104812510 Tarenaya hassleriana
Thecc.06G213600 Theobroma cacao
Thhalv10026295m.g Eutrema salsugineum
TPR.G22022 Trifolium pratense
TPR.G5469 Trifolium pratense
TPR.G5514 Trifolium pratense
TPR.G8297 Trifolium pratense
TWI38G0935 Tripterygium wilfordii
TWI38G1626 Tripterygium wilfordii
vmacro03710 Vaccinium macrocarpon
vmacro15833 Vaccinium macrocarpon
VMungo0720G0988 Vigna mungo
VMungo1215G1007 Vigna mungo

User provided reference genes

Program Settings