Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26710 Brassica napus
A09p28790 Brassica napus
A09p32780 Brassica napus
Aa31LG6G7960 Aethionema arabicum
Aa31LG9G11860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.413 Anthoceros agrestis
Actinidia01542 Actinidia chinensis
Actinidia29366 Actinidia chinensis
Ah.05g170480 Amaranthus hybridus
AL1G47880 Arabidopsis lyrata
AL6G43950 Arabidopsis lyrata
Aqoxy5G01853 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.19X5J5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4Y3JNF Arachis hypogaea
AT1G33490 Arabidopsis thaliana
AT4G10140 Arabidopsis thaliana
ATR1089G020 Amborella trichopoda
Atru.chr13.2581 Acer truncatum
AUR62013395 Chenopodium quinoa
AUR62038546 Chenopodium quinoa
AUR62038559 Chenopodium quinoa
BcaB01g01455 Brassica carinata
BcaB01g01456 Brassica carinata
BcaB05g23914 Brassica carinata
BcaB07g32992 Brassica carinata
BcaC03g16418 Brassica carinata
BcaC04g21022 Brassica carinata
BcaC08g43849 Brassica carinata
BolC2t10286H Brassica oleracea
BolC6t36383H Brassica oleracea
BolC9t56489H Brassica oleracea
BraA02t07674Z Brassica rapa
BraA09t38441Z Brassica rapa
BraA09t38813Z Brassica rapa
C02p42460 Brassica napus
C06p12320 Brassica napus
C09p36560 Brassica napus
CAN.G14.46 Capsicum annuum
CAN.G970.20 Capsicum annuum
CANSAT56G1596 Cannabis sativa
CARHR032930 Cardamine hirsuta
CARHR261230 Cardamine hirsuta
Carub.0001s3168 Capsella rubella
Carub.0006s2871 Capsella rubella
CBR_g61487 Chara braunii
Cc10_g16090 Coffea canephora
CDE02G3351 Ceratophyllum demersum
CDE08G1539 Ceratophyllum demersum
Ciclev10022474m.g Citrus clementina
CiPaw.03G012600 Carya illinoinensis
ClCG11G008280 Citrullus lanatus
COL.COLO4_25070 Corchorus olitorius
CsaV3_2G033320 Cucumis sativus L.
CSS0027083 Camellia sinensis var. sinensis
DCAR_014061 Daucus carota
Dinv02982 Davidia involucrata
Dinv04074 Davidia involucrata
Dinv08764 Davidia involucrata
Dinv17160 Davidia involucrata
Dinv37400 Davidia involucrata
Duzib116G0053 Durio zibethinus
Duzib116G0205 Durio zibethinus
ECA246G3009 Erigeron canadensis
ECA247G3060 Erigeron canadensis
EL10Ac1g01286 Beta vulgaris
Eucgr.F04085 Eucalyptus grandis
FAN20G2250 Fragaria x ananassa
FAN24G1049 Fragaria x ananassa
FvH4_2g00310 Fragaria vesca
Glyma.04G110500 Glycine max
Glyma.06G323900 Glycine max
Gohir.A05G248500 Gossypium hirsutum
Gohir.A08G229200 Gossypium hirsutum
Gohir.D05G250900 Gossypium hirsutum
Gohir.D08G249500 Gossypium hirsutum
Gorai.004G266100 Gossypium raimondii
Gorai.009G262300 Gossypium raimondii
GSVIVG01037160001 Vitis vinifera
HanXRQChr05g0150501 Helianthus annuus
HanXRQChr08g0226271 Helianthus annuus
HanXRQChr09g0244511 Helianthus annuus
HanXRQChr12g0369241 Helianthus annuus
Haze_14005 Corylus avellana
Hma1.2p1_0016F.1_g010960 Hydrangea macrophylla
HPP92_001197 Vanilla planifolia
HPP92_009217 Vanilla planifolia
HPP92_009291 Vanilla planifolia
Hund16918 Selenicereus undatus
Lalb_Chr01g0008181 Lupinus albus
Lalb_Chr18g0048451 Lupinus albus
Lj3g0027106 Lotus japonicus
Lj7A416T39 Lonicera japonica
Lsat_1_v5_gn_1_24560 Lactuca sativa
Lsat_1_v5_gn_6_109600 Lactuca sativa
Manes.02G202700 Manihot esculenta
Manes.18G109100 Manihot esculenta
Mapoly0022s0158 Marchantia polymorpha
MBI03_g07140_MAGBIO Magnolia biondii
MD05G1006100 Malus domestica
MD10G1002100 Malus domestica
Medtr3g006190 Medicago truncatula
Medtr4g030060 Medicago truncatula
MELO3C008103.2 Cucumis melo
Migut.C01399 Erythranthe guttata
MSTRG.1609 Avicennia marina
Nitab4.5_0000079g0160 Nicotiana tabacum
Nitab4.5_0007335g0050 Nicotiana tabacum
Nitab4.5_0007657g0070 Nicotiana tabacum
Nn5g27232 Nelumbo nucifera
Oeu020627.1 Olea europaea
Oeu028624.1 Olea europaea
Os05g0105500 Oryza sativa ssp. japonica
Peaxi162Scf00078g00103 Petunia axillaris
Peaxi162Scf00818g00320 Petunia axillaris
PGR083G1110 Punica granatum
PGSC0003DMG400006668 Solanum tuberosum
PGSC0003DMG400033136 Solanum tuberosum
Phvul.005G002300 Phaseolus vulgaris
Potri.003G048300 Populus trichocarpa
Potri.013G095200 Populus trichocarpa
Pp3c14_12450 Physcomitrium patens
Pp3c17_19860 Physcomitrium patens
Pp3c23_11640 Physcomitrium patens
Prupe.8G003400 Prunus persica
Psat5g232320 Pisum sativum
Psat7g229800 Pisum sativum
PSO210G5265 Papaver somniferum
PSO210G7326 Papaver somniferum
PSO761G0584 Papaver somniferum
QL09p001278 Quercus lobata
RcHm_v2.0_Chr6g0249591 Rosa chinensis
Rhsim12G0001800 Rhododendron simsii
Sabra13G0081200 Salix brachista
Sc06g0000070 Simmondsia chinensis
Sed0002471 Sechium edule
Sed0011254 Sechium edule
SEGI_01847 Sequoiadendron giganteum
SEGI_09604 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32638 Striga asiatica
SHI16862 Sapria himalayana
SMO143G0101 Selaginella moellendorffii
SMO356G0006 Selaginella moellendorffii
Solyc06g064450.3 Solanum lycopersicum
Solyc11g045030.2 Solanum lycopersicum
Sopen06g022920 Solanum pennellii
Sopen11g020480 Solanum pennellii
Sp1g28930 Schrenkiella parvula
Sp6g07270 Schrenkiella parvula
TAR375G0667 Trochodendron aralioides
TAR628G1251 Trochodendron aralioides
THA.LOC104806751 Tarenaya hassleriana
Thecc.08G168700 Theobroma cacao
Thhalv10008879m.g Eutrema salsugineum
Thhalv10029009m.g Eutrema salsugineum
TPR.G25525 Trifolium pratense
TPR.G39583 Trifolium pratense
TPR.G4421 Trifolium pratense
TWI12G0674 Tripterygium wilfordii
TWI18G1157 Tripterygium wilfordii
unitig_578.g16114 Utricularia gibba
unitig_8.g4904 Utricularia gibba
VMungo1080G0197 Vigna mungo
Zm00001eb207120 Zea mays
Zm00001eb289060 Zea mays

User provided reference genes

Program Settings