Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p32910 Brassica napus
A09p51910 Brassica napus
Aa31LG1G25350 Aethionema arabicum
Actinidia06605 Actinidia chinensis
Ah.03g147060 Amaranthus hybridus
AL4G42450 Arabidopsis lyrata
AL5G41660 Arabidopsis lyrata
Aqoxy3G00280 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35HMJH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4T7AK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WL5XYL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZXP0UV Arachis hypogaea
AT2G43630 Arabidopsis thaliana
AT3G59640 Arabidopsis thaliana
ATR0743G161 Amborella trichopoda
Atru.chr4.1388 Acer truncatum
Atru.chr4.262 Acer truncatum
Atru.chr6.1923 Acer truncatum
Atru.chr6.1925 Acer truncatum
AUR62005956 Chenopodium quinoa
AUR62006505 Chenopodium quinoa
AUR62025025 Chenopodium quinoa
AUR62026541 Chenopodium quinoa
AUR62039440 Chenopodium quinoa
BcaB02g08913 Brassica carinata
BcaB06g29332 Brassica carinata
BcaC02g07160 Brassica carinata
BcaC02g12375 Brassica carinata
BcaC07g40471 Brassica carinata
BcaC07g40494 Brassica carinata
BolC4t22093H Brassica oleracea
BolC4t28561H Brassica oleracea
BolC8t51065H Brassica oleracea
BraA04t18750Z Brassica rapa
BraA05t19376Z Brassica rapa
BraA09t40627Z Brassica rapa
C04p04620 Brassica napus
C04p70590 Brassica napus
C08p34630 Brassica napus
C08p34640 Brassica napus
CAN.G162.60 Capsicum annuum
CANSAT54G2783 Cannabis sativa
CARHR138810 Cardamine hirsuta
CARHR169980 Cardamine hirsuta
CARHR170000 Cardamine hirsuta
Carub.0004s2616 Capsella rubella
Carub.0005s2635 Capsella rubella
Ca_02292_v3 Cicer arietinum L.
Ca_13736_v3 Cicer arietinum L.
Ca_17991_v3 Cicer arietinum L.
Cc04_g05110 Coffea canephora
CDE05G3235 Ceratophyllum demersum
Cfa015265 Carpinus fangiana
Ciclev10021938m.g Citrus clementina
CiPaw.02G101000 Carya illinoinensis
ClCG03G006580 Citrullus lanatus
COL.COLO4_19851 Corchorus olitorius
Cpa.g.sc9.354 Carica papaya
CsaV3_1G036770 Cucumis sativus L.
DCAR_005473 Daucus carota
Dinv40298 Davidia involucrata
Duzib150G0228 Durio zibethinus
Duzib168G0981 Durio zibethinus
ECA248G0230 Erigeron canadensis
EL10Ac6g15412 Beta vulgaris
Eucgr.A01325 Eucalyptus grandis
FAN07G2673 Fragaria x ananassa
FAN12G3936 Fragaria x ananassa
FAN12G4128 Fragaria x ananassa
FAN17G1422 Fragaria x ananassa
FAN19G0170 Fragaria x ananassa
FAN22G0682 Fragaria x ananassa
FAN26G0137 Fragaria x ananassa
FAN28G0555 Fragaria x ananassa
FvH4_1g21910 Fragaria vesca
FvH4_4g10550 Fragaria vesca
Glyma.07G165200 Glycine max
Glyma.09G032300 Glycine max
Glyma.09G118100 Glycine max
Glyma.15G137300 Glycine max
Gohir.A13G222400 Gossypium hirsutum
Gohir.D10G228800 Gossypium hirsutum
Gohir.D13G227200 Gossypium hirsutum
Gorai.011G261300 Gossypium raimondii
Gorai.012G140500 Gossypium raimondii
Gorai.012G140700 Gossypium raimondii
Gorai.013G194600 Gossypium raimondii
Gorai.013G257700 Gossypium raimondii
GSVIVG01038129001 Vitis vinifera
HanXRQChr10g0307981 Helianthus annuus
Haze_01374 Corylus avellana
Hma1.2p1_0017F.1_g011670 Hydrangea macrophylla
HPP92_005578 Vanilla planifolia
HPP92_005597 Vanilla planifolia
Hund04296 Selenicereus undatus
Lalb_Chr02g0158251 Lupinus albus
Lalb_Chr10g0096191 Lupinus albus
Lalb_Chr21g0317861 Lupinus albus
Lalb_Chr22g0353411 Lupinus albus
Lj2g0004083 Lotus japonicus
Lj2g0015848 Lotus japonicus
Lsat_1_v5_gn_5_149741 Lactuca sativa
Manes.11G130500 Manihot esculenta
MBI08_g25557_MAGBIO Magnolia biondii
MBI08_g25559_MAGBIO Magnolia biondii
MD08G1231200 Malus domestica
MD10G1168700 Malus domestica
MD15G1424100 Malus domestica
Medtr1g030860 Medicago truncatula
Medtr1g030870 Medicago truncatula
Medtr6g012760 Medicago truncatula
MELO3C002758.2 Cucumis melo
Migut.M00919 Erythranthe guttata
MSTRG.16235 Avicennia marina
MSTRG.19791 Avicennia marina
Nitab4.5_0000214g0170 Nicotiana tabacum
Nitab4.5_0000518g0010 Nicotiana tabacum
Nitab4.5_0001095g0110 Nicotiana tabacum
Nn1g09685 Nelumbo nucifera
Oeu043896.1 Olea europaea
Os02g0606000 Oryza sativa ssp. japonica
Os04g0493300 Oryza sativa ssp. japonica
Peaxi162Scf00008g03715 Petunia axillaris
PGR031G1729 Punica granatum
PGSC0003DMG400005514 Solanum tuberosum
Phvul.003G023800 Phaseolus vulgaris
Phvul.006G120600 Phaseolus vulgaris
Potri.006G123800 Populus trichocarpa
Prupe.1G205800 Prunus persica
Prupe.1G570000 Prunus persica
Psat1g079080 Pisum sativum
Psat6g042920 Pisum sativum
PSO017G5600 Papaver somniferum
PSO675G4101 Papaver somniferum
QL10p053348 Quercus lobata
QL10p054510 Quercus lobata
RcHm_v2.0_Chr2g0115921 Rosa chinensis
RcHm_v2.0_Chr4g0406201 Rosa chinensis
Sabra06G0098000 Salix brachista
SalBow8G1390 Salvia bowleyana
Sc05g0005560 Simmondsia chinensis
Sed0011106 Sechium edule
Sed0022603 Sechium edule
SGA_v2.0_scaffold1G00163 Striga asiatica
SHI23072 Sapria himalayana
Solyc04g054460.3 Solanum lycopersicum
Sopen04g024280 Solanum pennellii
Sp4g25730 Schrenkiella parvula
Sp5g03540 Schrenkiella parvula
TAR362G0930 Trochodendron aralioides
TAR633G2112 Trochodendron aralioides
THA.LOC104802322 Tarenaya hassleriana
THA.LOC104803988 Tarenaya hassleriana
Thecc.09G282100 Theobroma cacao
Thhalv10001554m.g Eutrema salsugineum
TPR.G36930 Trifolium pratense
TPR.G8801 Trifolium pratense
TWI15G0091 Tripterygium wilfordii
TWI63G0567 Tripterygium wilfordii
unitig_61.g26169 Utricularia gibba
VMungo0540G0595 Vigna mungo
VMungo1215G1727 Vigna mungo
Zm00001eb184150 Zea mays
Zm00001eb246630 Zea mays

User provided reference genes

Program Settings