Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p52240 Brassica napus
A06p46900 Brassica napus
A08p05480 Brassica napus
A09p35220 Brassica napus
Aa31LG2G14980 Aethionema arabicum
Aa31LG6G2430 Aethionema arabicum
Actinidia01307 Actinidia chinensis
Ah.14g083610 Amaranthus hybridus
AL1G45420 Arabidopsis lyrata
AL7G33850 Arabidopsis lyrata
AL8G14740 Arabidopsis lyrata
Aqoxy7G02951 Aquilegia oxysepala
Aqoxy7G02955 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1ZQN8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5I9QWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DBS0PV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WNE9PJ Arachis hypogaea
AT1G31010 Arabidopsis thaliana
AT4G20010 Arabidopsis thaliana
AT5G44785 Arabidopsis thaliana
ATR0580G332 Amborella trichopoda
Atru.chr10.647 Acer truncatum
AUR62021340 Chenopodium quinoa
AUR62031373 Chenopodium quinoa
AUR62033887 Chenopodium quinoa
BcaB02g07810 Brassica carinata
BcaB04g17495 Brassica carinata
BcaB07g32759 Brassica carinata
BcaC05g27132 Brassica carinata
BcaC06g30639 Brassica carinata
BcaC06g31587 Brassica carinata
BcaC06g34508 Brassica carinata
BcaC07g37200 Brassica carinata
BcaNung03486 Brassica carinata
BolC5t31754H Brassica oleracea
BolC7t43306H Brassica oleracea
BolC7t45570H Brassica oleracea
BolC8t47405H Brassica oleracea
BraA03t14299Z Brassica rapa
BraA06t27564Z Brassica rapa
BraA08t32554Z Brassica rapa
BraA09t39049Z Brassica rapa
C05p30170 Brassica napus
C07p27740 Brassica napus
C07p50670 Brassica napus
C08p06020 Brassica napus
CAN.G1676.8 Capsicum annuum
CANSAT11G1113 Cannabis sativa
CARHR005150 Cardamine hirsuta
CARHR030540 Cardamine hirsuta
CARHR178090 Cardamine hirsuta
CARHR226800 Cardamine hirsuta
Carub.0001s2940 Capsella rubella
Carub.0007s2112 Capsella rubella
Carub.0008s0348 Capsella rubella
Ca_25626_v3 Cicer arietinum L.
Cc06_g03620 Coffea canephora
CDE02G0073 Ceratophyllum demersum
CDE02G3053 Ceratophyllum demersum
CDE02G3391 Ceratophyllum demersum
Cfa020717 Carpinus fangiana
Ciclev10015693m.g Citrus clementina
CiPaw.15G154200 Carya illinoinensis
COL.COLO4_28583 Corchorus olitorius
Cpa.g.sc30.130 Carica papaya
Cre12.g483700 Chlamydomonas reinhardtii
Cre12.g483720 Chlamydomonas reinhardtii
CSS0042579 Camellia sinensis var. sinensis
DCAR_020138 Daucus carota
Dinv25487 Davidia involucrata
Duzib132G0390 Durio zibethinus
ECA236G5076 Erigeron canadensis
EL10Ac8g18326 Beta vulgaris
Eucgr.B03962 Eucalyptus grandis
FAN21G2670 Fragaria x ananassa
FAN25G3508 Fragaria x ananassa
FvH4_3g12060 Fragaria vesca
Glyma.01G002501 Glycine max
Glyma.05G076800 Glycine max
Glyma.07G129800 Glycine max
Gohir.A04G134500 Gossypium hirsutum
Gohir.D04G177700 Gossypium hirsutum
Gorai.012G170600 Gossypium raimondii
GSVIVG01029252001 Vitis vinifera
GSVIVG01029254001 Vitis vinifera
HanXRQChr05g0142011 Helianthus annuus
Haze_19032 Corylus avellana
Hma1.2p1_0235F.1_g098960 Hydrangea macrophylla
Hma1.2p1_0726F.1_g208940 Hydrangea macrophylla
HPP92_010776 Vanilla planifolia
Hund26315 Selenicereus undatus
Lalb_Chr14g0375371 Lupinus albus
Lj2g0002936 Lotus japonicus
Lj9A656T46 Lonicera japonica
Manes.15G101900 Manihot esculenta
MBI14_g19446_MAGBIO Magnolia biondii
MBI14_g19448_MAGBIO Magnolia biondii
MCO06G071 Micromonas commoda
MD05G1254900 Malus domestica
MD09G1140800 Malus domestica
MD10G1235000 Malus domestica
Medtr6g092780 Medicago truncatula
Migut.J00421 Erythranthe guttata
Migut.L01663 Erythranthe guttata
MSTRG.10300 Avicennia marina
MSTRG.26723 Avicennia marina
MSTRG.5725 Avicennia marina
Nitab4.5_0000669g0190 Nicotiana tabacum
Nitab4.5_0007806g0010 Nicotiana tabacum
Nn8g40402 Nelumbo nucifera
Oeu026847.1 Olea europaea
Oeu035139.1 Olea europaea
Os01g0949060 Oryza sativa ssp. japonica
Peaxi162Scf00005g04212 Petunia axillaris
PGR044G1339 Punica granatum
PGSC0003DMG400001770 Solanum tuberosum
Phvul.004G177000 Phaseolus vulgaris
Potri.001G394200 Populus trichocarpa
Potri.014G035600 Populus trichocarpa
Pp3c17_4940 Physcomitrium patens
Pp3c6_28980 Physcomitrium patens
PRCOL_00002760 Prasinoderma coloniale
Prupe.4G108900 Prunus persica
Psat1g050880 Pisum sativum
PSO063G0960 Papaver somniferum
PSO063G4384 Papaver somniferum
PSO170G4619 Papaver somniferum
PSO170G5433 Papaver somniferum
PSO407G0216 Papaver somniferum
PSO421G0072 Papaver somniferum
QL01p007347 Quercus lobata
RcHm_v2.0_Chr2g0098041 Rosa chinensis
RcHm_v2.0_Chr5g0019771 Rosa chinensis
Rhsim01G0002900 Rhododendron simsii
Sabra16G0258300 Salix brachista
SalBow4G0369 Salvia bowleyana
SalBow4G2938 Salvia bowleyana
Sc17g0003750 Simmondsia chinensis
SGA_v2.0_scaffold126G33905 Striga asiatica
SGA_v2.0_scaffold30G12490 Striga asiatica
SGA_v2.0_scaffold35G14157 Striga asiatica
SGA_v2.0_scaffold75G24878 Striga asiatica
SGA_v2.0_scaffold94G28669 Striga asiatica
SHI18056 Sapria himalayana
SHI18057 Sapria himalayana
Solyc09g007430.1 Solanum lycopersicum
Sopen09g002310 Solanum pennellii
Sp1g26870 Schrenkiella parvula
Sp1g34710 Schrenkiella parvula
Sp2g09630 Schrenkiella parvula
Sp7g18470 Schrenkiella parvula
TAR625G0076 Trochodendron aralioides
THA.LOC104806221 Tarenaya hassleriana
THA.LOC104812701 Tarenaya hassleriana
Thecc.02G005400 Theobroma cacao
Thhalv10000889m.g Eutrema salsugineum
Thhalv10008085m.g Eutrema salsugineum
Thhalv10011640m.g Eutrema salsugineum
Thhalv10025547m.g Eutrema salsugineum
TPR.G35494 Trifolium pratense
unitig_26.g9216 Utricularia gibba
vmacro13134 Vaccinium macrocarpon
VMungo0464G2174 Vigna mungo
Zm00001eb363090 Zea mays

User provided reference genes

Program Settings