Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04110 Brassica napus
Aa31LG2G16170 Aethionema arabicum
Aa31LG2G16180 Aethionema arabicum
Aa31LG2G16190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis
Actinidia15256 Actinidia chinensis
AL7G16960 Arabidopsis lyrata
Aqoxy5G01277 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea
AT4G34310 Arabidopsis thaliana
ATR1159G040 Amborella trichopoda
Atru.chr1.1667 Acer truncatum
Atru.chr1.1668 Acer truncatum
Atru.chr13.637 Acer truncatum
AUR62022445 Chenopodium quinoa
AUR62039313 Chenopodium quinoa
BolC1t00433H Brassica oleracea
BraA01t00399Z Brassica rapa
C01p04470 Brassica napus
CAN.G371.43 Capsicum annuum
CAN.G371.44 Capsicum annuum
CANSAT78G0057 Cannabis sativa
CARHR242470 Cardamine hirsuta
Carub.0007s0605 Capsella rubella
Ca_13305_v3 Cicer arietinum L.
CBR_g45541 Chara braunii
Cc10_g04460 Coffea canephora
CDE10G0798 Ceratophyllum demersum
CDE10G0919 Ceratophyllum demersum
Cfa018516 Carpinus fangiana
Ciclev10000175m.g Citrus clementina
CiPaw.16G046500 Carya illinoinensis
CiPaw.16G046800 Carya illinoinensis
ClCG05G019730 Citrullus lanatus
COL.COLO4_26463 Corchorus olitorius
Cpa.g.c24415.13 Carica papaya
Cre16.g686501 Chlamydomonas reinhardtii
CsaV3_4G034150 Cucumis sativus L.
CSS0012651 Camellia sinensis var. sinensis
DCAR_020931 Daucus carota
Dinv35980 Davidia involucrata
Dinv39334 Davidia involucrata
Duzib093G0393 Durio zibethinus
ECA232G4920 Erigeron canadensis
ECA247G1923 Erigeron canadensis
EL10Ac1g01783 Beta vulgaris
Eucgr.F02367 Eucalyptus grandis
FAN15G1136 Fragaria x ananassa
FAN27G3414 Fragaria x ananassa
FvH4_2g34840 Fragaria vesca
Glyma.14G081100 Glycine max
Glyma.17G244300 Glycine max
Gohir.A01G118500 Gossypium hirsutum
Gohir.D01G106800 Gossypium hirsutum
Gorai.002G131100 Gossypium raimondii
GSVIVG01009550001 Vitis vinifera
GSVIVG01009553001 Vitis vinifera
HanXRQChr02g0038751 Helianthus annuus
HanXRQChr16g0507461 Helianthus annuus
Haze_17559 Corylus avellana
Haze_18739 Corylus avellana
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla
HPP92_019296 Vanilla planifolia
HPP92_019297 Vanilla planifolia
HPP92_028299 Vanilla planifolia
HPP92_028301 Vanilla planifolia
Hund26625 Selenicereus undatus
Lalb_Chr24g0399211 Lupinus albus
Lj4A53T53 Lonicera japonica
Lj5g0025546 Lotus japonicus
Lsat_1_v5_gn_1_20621 Lactuca sativa
Lsat_1_v5_gn_1_21400 Lactuca sativa
Lsat_1_v5_gn_1_42721 Lactuca sativa
Lsat_1_v5_gn_2_12981 Lactuca sativa
Lsat_1_v5_gn_3_76560 Lactuca sativa
Lsat_1_v5_gn_4_124060 Lactuca sativa
Lsat_1_v5_gn_4_501 Lactuca sativa
Lsat_1_v5_gn_5_11681 Lactuca sativa
Lsat_1_v5_gn_5_11760 Lactuca sativa
Lsat_1_v5_gn_8_33681 Lactuca sativa
Lsat_1_v5_gn_9_17240 Lactuca sativa
Lsat_1_v5_gn_9_17721 Lactuca sativa
Lsat_1_v5_gn_9_67901 Lactuca sativa
Lsat_1_v5_gn_9_98160 Lactuca sativa
Manes.05G171200 Manihot esculenta
Mapoly0016s0164 Marchantia polymorpha
Mapoly0016s0166 Marchantia polymorpha
Mapoly0017s0011 Marchantia polymorpha
Mapoly0031s0035 Marchantia polymorpha
Mapoly0033s0109 Marchantia polymorpha
Mapoly0049s0015 Marchantia polymorpha
Mapoly0062s0120 Marchantia polymorpha
Mapoly0064s0093 Marchantia polymorpha
Mapoly0064s0096 Marchantia polymorpha
Mapoly0107s0021 Marchantia polymorpha
Mapoly0120s0019 Marchantia polymorpha
Mapoly0200s0001 Marchantia polymorpha
Mapoly0200s0002 Marchantia polymorpha
Mapoly0637s0001 Marchantia polymorpha
Mapoly0893s0001 Marchantia polymorpha
Mapoly1060s0002 Marchantia polymorpha
Mapoly2546s0001 Marchantia polymorpha
MBI06_g27707_MAGBIO Magnolia biondii
MD08G1105600 Malus domestica
MD08G1105800 Malus domestica
MD15G1086600 Malus domestica
Medtr1g019960 Medicago truncatula
MELO3C016737.2 Cucumis melo
Migut.N02696 Erythranthe guttata
MSTRG.22273 Avicennia marina
MSTRG.22274 Avicennia marina
Nitab4.5_0000068g0550 Nicotiana tabacum
Nitab4.5_0005301g0040 Nicotiana tabacum
Nn5g30212 Nelumbo nucifera
Oeu003300.1 Olea europaea
Oeu057258.1 Olea europaea
Os03g0185500 Oryza sativa ssp. japonica
Peaxi162Scf00528g00825 Petunia axillaris
PGR031G2748 Punica granatum
PGSC0003DMG400007988 Solanum tuberosum
Phvul.001G020000 Phaseolus vulgaris
Potri.002G128201 Populus trichocarpa
Potri.014G034100 Populus trichocarpa
Pp3c17_5660 Physcomitrium patens
Pp3c24_4860 Physcomitrium patens
Pp3c5_20790 Physcomitrium patens
PRCOL_00001182 Prasinoderma coloniale
Prupe.1G440200 Prunus persica
Psat6g012000 Pisum sativum
PSO675G6987 Papaver somniferum
QL02p005708 Quercus lobata
RcHm_v2.0_Chr6g0307221 Rosa chinensis
Rhsim06G0047100 Rhododendron simsii
Sabra14G0024200 Salix brachista
Sc02g0006980 Simmondsia chinensis
Sed0012719 Sechium edule
Sed0015301 Sechium edule
SEGI_03031 Sequoiadendron giganteum
SEGI_03645 Sequoiadendron giganteum
SEGI_07910 Sequoiadendron giganteum
SEGI_09820 Sequoiadendron giganteum
SEGI_30856 Sequoiadendron giganteum
SGA_v2.0_scaffold162G37946 Striga asiatica
SGA_v2.0_scaffold226G43137 Striga asiatica
SGA_v2.0_scaffold6G03459 Striga asiatica
SHI08298 Sapria himalayana
SHI08301 Sapria himalayana
SMO144G0009 Selaginella moellendorffii
Solyc04g079280.4 Solanum lycopersicum
Sopen04g032870 Solanum pennellii
Sp7g06010 Schrenkiella parvula
Sp7g32110 Schrenkiella parvula
TAR625G1112 Trochodendron aralioides
THA.LOC104806947 Tarenaya hassleriana
Thecc.08G012500 Theobroma cacao
Thhalv10024246m.g Eutrema salsugineum
TPR.G13698 Trifolium pratense
TPR.G40548 Trifolium pratense
unitig_26.g10059 Utricularia gibba
unitig_26.g10060 Utricularia gibba
vmacro21553 Vaccinium macrocarpon
VMungo0647G0261 Vigna mungo
Zm00001eb006390 Zea mays

User provided reference genes

Program Settings