Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p27940 Brassica napus
A09p57320 Brassica napus
Aa31LG5G3510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2350 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2360 Anthoceros agrestis
Actinidia04492 Actinidia chinensis
Actinidia08449 Actinidia chinensis
Actinidia40096 Actinidia chinensis
AL37U10030 Arabidopsis lyrata
AL6G12230 Arabidopsis lyrata
AL8G16520 Arabidopsis lyrata
AL8G16540 Arabidopsis lyrata
Aqoxy102s001 Aquilegia oxysepala
Aqoxy2G03524 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1TW0Z8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5I9I5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A4GDND Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EA06G0 Arachis hypogaea
AT5G02940 Arabidopsis thaliana
AT5G43745 Arabidopsis thaliana
ATR0665G279 Amborella trichopoda
Atru.chr4.2282 Acer truncatum
AUR62000438 Chenopodium quinoa
AUR62006783 Chenopodium quinoa
BcaB07g30561 Brassica carinata
BcaB08g35114 Brassica carinata
BcaB08g35592 Brassica carinata
BcaC03g16592 Brassica carinata
BcaC07g41038 Brassica carinata
BolC2t10456H Brassica oleracea
BolC8t51609H Brassica oleracea
BraA02t07831Z Brassica rapa
BraA09t41125Z Brassica rapa
C02p44140 Brassica napus
C08p40410 Brassica napus
CAN.G626.12 Capsicum annuum
CANSAT78G1672 Cannabis sativa
CARHR179740 Cardamine hirsuta
CARHR179760 Cardamine hirsuta
CARHR210350 Cardamine hirsuta
Carub.0006s0174 Capsella rubella
Carub.0008s0490 Capsella rubella
Ca_09879_v3 Cicer arietinum L.
Cc00_g20710 Coffea canephora
CDE03G0177 Ceratophyllum demersum
CDE03G0382 Ceratophyllum demersum
Cfa008398 Carpinus fangiana
Ciclev10004298m.g Citrus clementina
CiPaw.02G117900 Carya illinoinensis
ClCG05G004690 Citrullus lanatus
COL.COLO4_15767 Corchorus olitorius
Cpa.g.sc58.22 Carica papaya
CsaV3_3G012690 Cucumis sativus L.
CSS0000736 Camellia sinensis var. sinensis
CSS0009154 Camellia sinensis var. sinensis
CSS0014985 Camellia sinensis var. sinensis
CSS0016797 Camellia sinensis var. sinensis
CSS0018059 Camellia sinensis var. sinensis
CSS0018877 Camellia sinensis var. sinensis
CSS0020151 Camellia sinensis var. sinensis
CSS0020548 Camellia sinensis var. sinensis
CSS0020604 Camellia sinensis var. sinensis
CSS0034524 Camellia sinensis var. sinensis
CSS0047496 Camellia sinensis var. sinensis
DCAR_000306 Daucus carota
DCAR_002355 Daucus carota
DCAR_024200 Daucus carota
Dinv14075 Davidia involucrata
Dinv44613 Davidia involucrata
Duzib151G0366 Durio zibethinus
ECA233G2689 Erigeron canadensis
EL10Ac4g09514 Beta vulgaris
Eucgr.H00218 Eucalyptus grandis
FAN02G4304 Fragaria x ananassa
FAN12G0347 Fragaria x ananassa
FAN22G2191 Fragaria x ananassa
FvH4_4g02230 Fragaria vesca
Glyma.10G179700 Glycine max
Glyma.20G210700 Glycine max
Gohir.A09G057200 Gossypium hirsutum
Gohir.A09G222100 Gossypium hirsutum
Gohir.A10G114400 Gossypium hirsutum
Gohir.D09G056400 Gossypium hirsutum
Gohir.D09G224200 Gossypium hirsutum
Gohir.D10G152700 Gossypium hirsutum
Gorai.006G070000 Gossypium raimondii
Gorai.006G245700 Gossypium raimondii
Gorai.011G170600 Gossypium raimondii
GSVIVG01018095001 Vitis vinifera
HanXRQChr12g0381191 Helianthus annuus
Haze_11270 Corylus avellana
HPP92_009627 Vanilla planifolia
Hund07295 Selenicereus undatus
Hund21850 Selenicereus undatus
Lalb_Chr02g0150011 Lupinus albus
Lalb_Chr03g0037911 Lupinus albus
Lj5g0007630 Lotus japonicus
Lj6C654G1 Lonicera japonica
Lsat_1_v5_gn_5_67480 Lactuca sativa
Manes.03G170100 Manihot esculenta
MBI04_g06839_MAGBIO Magnolia biondii
MBI04_g44053_MAGBIO Magnolia biondii
MBI04_g44218_MAGBIO Magnolia biondii
MD11G1069300 Malus domestica
MD11G1069400 Malus domestica
MD13G1204000 Malus domestica
MD16G1206000 Malus domestica
Medtr1g076330 Medicago truncatula
MELO3C006480.2 Cucumis melo
Migut.G00416 Erythranthe guttata
MSTRG.21887 Avicennia marina
Nitab4.5_0000525g0110 Nicotiana tabacum
Nitab4.5_0004203g0030 Nicotiana tabacum
Nn1g00039 Nelumbo nucifera
Nn1g02552 Nelumbo nucifera
Nn1g02553 Nelumbo nucifera
Nn1g02554 Nelumbo nucifera
Nn1g02555 Nelumbo nucifera
Oeu003600.1 Olea europaea
Os03g0163100 Oryza sativa ssp. japonica
Peaxi162Scf01416g00020 Petunia axillaris
PGR142G2602 Punica granatum
Phvul.003G138460 Phaseolus vulgaris
Potri.008G160700 Populus trichocarpa
Potri.010G078600 Populus trichocarpa
Pp3c17_14700 Physcomitrium patens
Prupe.1G027100 Prunus persica
Psat6g113560 Pisum sativum
PSO210G3643 Papaver somniferum
PSO238G0023 Papaver somniferum
QL06p015067 Quercus lobata
QL06p015078 Quercus lobata
RcHm_v2.0_Chr4g0389551 Rosa chinensis
RcHm_v2.0_Chr4g0389561 Rosa chinensis
RcHm_v2.0_Chr4g0389571 Rosa chinensis
RcHm_v2.0_Chr4g0389581 Rosa chinensis
Rhsim04G0194700 Rhododendron simsii
Sabra08G0122500 Salix brachista
Sabra08G0122600 Salix brachista
Sabra10G0064800 Salix brachista
SalBow2G1414 Salvia bowleyana
Sc13g0004920 Simmondsia chinensis
Sed0024916 Sechium edule
SEGI_02702 Sequoiadendron giganteum
SEGI_12592 Sequoiadendron giganteum
SEGI_13030 Sequoiadendron giganteum
SEGI_27587 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29777 Striga asiatica
SMO174G0094 Selaginella moellendorffii
SMO340G0070 Selaginella moellendorffii
Solyc09g083260.4 Solanum lycopersicum
Sopen09g032180 Solanum pennellii
Sp2g08530 Schrenkiella parvula
TAR365G0259 Trochodendron aralioides
TAR636G0266 Trochodendron aralioides
Thecc.04G243900 Theobroma cacao
Thhalv10003159m.g Eutrema salsugineum
TPR.G14022 Trifolium pratense
TWI09G1436 Tripterygium wilfordii
TWI73G0220 Tripterygium wilfordii
unitig_748.g7312 Utricularia gibba
vmacro08400 Vaccinium macrocarpon
VMungo0720G2420 Vigna mungo
Zm00001eb004780 Zea mays

User provided reference genes

Program Settings