Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03150 Brassica napus
A07p23380 Brassica napus
A09p50290 Brassica napus
Aa31LG10G12240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2535 Anthoceros agrestis
Actinidia39221 Actinidia chinensis
Actinidia39222 Actinidia chinensis
Ah.13g076490 Amaranthus hybridus
AL205U10010 Arabidopsis lyrata
AL5G38930 Arabidopsis lyrata
AL8G26960 Arabidopsis lyrata
Aqoxy1G00235 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7DG8CI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WY7AF9 Arachis hypogaea
AT3G57400 Arabidopsis thaliana
AT5G52500 Arabidopsis thaliana
ATR0782G190 Amborella trichopoda
Atru.chr1.1110 Acer truncatum
AUR62024455 Chenopodium quinoa
AUR62026044 Chenopodium quinoa
BcaB02g07608 Brassica carinata
BcaB02g08317 Brassica carinata
BcaC02g09937 Brassica carinata
BcaC02g09938 Brassica carinata
BcaC07g40393 Brassica carinata
BcaC08g44838 Brassica carinata
BolC4t25057H Brassica oleracea
BolC6t37592H Brassica oleracea
BolC8t50893H Brassica oleracea
BraA07t30003Z Brassica rapa
BraA09t40480Z Brassica rapa
C04p35000 Brassica napus
C06p24450 Brassica napus
C08p32820 Brassica napus
CAN.G676.33 Capsicum annuum
CANSAT80G0327 Cannabis sativa
CARHR167600 Cardamine hirsuta
Carub.0005s2424 Capsella rubella
Ca_08453_v3 Cicer arietinum L.
Cc06_g17600 Coffea canephora
CDE08G1472 Ceratophyllum demersum
CDE09G0122 Ceratophyllum demersum
Cfa016810 Carpinus fangiana
Ciclev10004677m.g Citrus clementina
CiPaw.09G038700 Carya illinoinensis
CiPaw.10G033700 Carya illinoinensis
ClCG04G000170 Citrullus lanatus
COL.COLO4_28298 Corchorus olitorius
Cpa.g.sc33.204 Carica papaya
CsaV3_4G011650 Cucumis sativus L.
CSS0028183 Camellia sinensis var. sinensis
DCAR_013604 Daucus carota
Dinv12489 Davidia involucrata
Dinv39612 Davidia involucrata
Duzib093G1448 Durio zibethinus
Duzib106G1406 Durio zibethinus
Duzib128G1660 Durio zibethinus
Duzib152G0001 Durio zibethinus
ECA247G0299 Erigeron canadensis
ECA248G0930 Erigeron canadensis
EL10Ac3g07095 Beta vulgaris
EL10Ac6g14633 Beta vulgaris
Eucgr.A02343 Eucalyptus grandis
FAN02G3785 Fragaria x ananassa
FAN05G0825 Fragaria x ananassa
FAN09G3682 Fragaria x ananassa
FAN14G3684 Fragaria x ananassa
FvH4_6g23940 Fragaria vesca
Glyma.02G184700 Glycine max
Glyma.03G136300 Glycine max
Glyma.19G138200 Glycine max
Gohir.A01G131000 Gossypium hirsutum
Gohir.A11G312700 Gossypium hirsutum
Gohir.D01G120400 Gossypium hirsutum
Gohir.D11G329400 Gossypium hirsutum
Gorai.002G147000 Gossypium raimondii
Gorai.007G360600 Gossypium raimondii
GSVIVG01033262001 Vitis vinifera
HanXRQChr05g0131861 Helianthus annuus
HanXRQChr10g0296681 Helianthus annuus
HanXRQChr13g0395921 Helianthus annuus
Haze_19850 Corylus avellana
Lalb_Chr01g0017331 Lupinus albus
Lalb_Chr20g0110531 Lupinus albus
Lalb_Chr25g0287141 Lupinus albus
Lj1g0001621 Lotus japonicus
Lju124C42T7 Lonicera japonica
Lsat_1_v5_gn_5_161320 Lactuca sativa
Lsat_1_v5_gn_8_81220 Lactuca sativa
Lsat_1_v5_gn_9_29201 Lactuca sativa
Manes.08G051300 Manihot esculenta
Manes.09G020900 Manihot esculenta
Mapoly0052s0060 Marchantia polymorpha
Mapoly0109s0039 Marchantia polymorpha
MD12G1074600 Malus domestica
MD14G1072700 Malus domestica
Medtr7g091450 Medicago truncatula
MELO3C023147.2 Cucumis melo
Migut.J01754 Erythranthe guttata
MSTRG.19858 Avicennia marina
MSTRG.6426 Avicennia marina
Nitab4.5_0000082g0160 Nicotiana tabacum
Nitab4.5_0000586g0080 Nicotiana tabacum
Nitab4.5_0013624g0010 Nicotiana tabacum
Nn1g04410 Nelumbo nucifera
Nn1g05572 Nelumbo nucifera
Nn2g15213 Nelumbo nucifera
Nn7g36300 Nelumbo nucifera
Oeu023579.1 Olea europaea
Oeu033010.1 Olea europaea
Peaxi162Scf00130g00012 Petunia axillaris
PGR004G2076 Punica granatum
PGSC0003DMG400008166 Solanum tuberosum
PGSC0003DMG400027281 Solanum tuberosum
Phvul.001G131600 Phaseolus vulgaris
Potri.006G050100 Populus trichocarpa
Potri.016G056300 Populus trichocarpa
Pp3c13_6400 Physcomitrium patens
Pp3c20_13470 Physcomitrium patens
Pp3c23_16170 Physcomitrium patens
Pp3c3_2450 Physcomitrium patens
Pp3c5_24720 Physcomitrium patens
Pp3c6_29040 Physcomitrium patens
Pp3c6_3920 Physcomitrium patens
Pp3c8_14130 Physcomitrium patens
Prupe.7G058900 Prunus persica
Psat3g072520 Pisum sativum
PSO339G4967 Papaver somniferum
PSO384G0452 Papaver somniferum
QL07p000671 Quercus lobata
RcHm_v2.0_Chr3g0482601 Rosa chinensis
Rhsim03G0025000 Rhododendron simsii
Sabra06G0035000 Salix brachista
Sabra16G0058800 Salix brachista
SalBow6G3548 Salvia bowleyana
Sc19g0006560 Simmondsia chinensis
Sed0026358 Sechium edule
SEGI_09580 Sequoiadendron giganteum
SEGI_13236 Sequoiadendron giganteum
SEGI_35991 Sequoiadendron giganteum
SEGI_40609 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30405 Striga asiatica
SGA_v2.0_scaffold5252G54614 Striga asiatica
SGA_v2.0_scaffold66G22353 Striga asiatica
SMO201G0108 Selaginella moellendorffii
Solyc04g015850.3 Solanum lycopersicum
Solyc10g017860.1 Solanum lycopersicum
Solyc10g079390.1 Solanum lycopersicum
Sopen04g007890 Solanum pennellii
Sp5g05200 Schrenkiella parvula
TAR623G0492 Trochodendron aralioides
TAR633G0189 Trochodendron aralioides
THA.LOC104802092 Tarenaya hassleriana
THA.LOC104824440 Tarenaya hassleriana
Thecc.05G152800 Theobroma cacao
Thhalv10006507m.g Eutrema salsugineum
TPR.G3718 Trifolium pratense
TWI53G1538 Tripterygium wilfordii
TWI74G1076 Tripterygium wilfordii
unitig_22.g6044 Utricularia gibba
unitig_8.g3506 Utricularia gibba
unitig_8.g3507 Utricularia gibba
vmacro07846 Vaccinium macrocarpon
VMungo0720G0980 Vigna mungo
VMungo1383G1866 Vigna mungo

User provided reference genes

Program Settings