Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p50490 Brassica napus
Aa31LG10G12420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2396 Anthoceros agrestis
Actinidia38565 Actinidia chinensis
Ah.04g151900 Amaranthus hybridus
AL5G39210 Arabidopsis lyrata
Aqoxy1G00236 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6VN1VE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UMBD9R Arachis hypogaea
AT3G57630 Arabidopsis thaliana
ATR0605G138 Amborella trichopoda
ATR0605G150 Amborella trichopoda
Atru.chr1.1037 Acer truncatum
AUR62024400 Chenopodium quinoa
AUR62025994 Chenopodium quinoa
BcaC07g40358 Brassica carinata
BolC8t50921H Brassica oleracea
BraA09t40500Z Brassica rapa
C08p33190 Brassica napus
CAN.G77.1 Capsicum annuum
CANSAT80G0325 Cannabis sativa
CARHR167930 Cardamine hirsuta
Carub.0005s2447 Capsella rubella
Ca_26680_v3 Cicer arietinum L.
Ca_26681_v3 Cicer arietinum L.
Ca_26767_v3 Cicer arietinum L.
Cc06_g16610 Coffea canephora
Cc06_g16630 Coffea canephora
CDE05G2581 Ceratophyllum demersum
Cfa016853 Carpinus fangiana
Ciclev10004353m.g Citrus clementina
CiPaw.09G035400 Carya illinoinensis
CiPaw.10G031500 Carya illinoinensis
ClCG10G017170 Citrullus lanatus
COL.COLO4_28671 Corchorus olitorius
Cpa.g.sc92.12 Carica papaya
Cre02.g111150 Chlamydomonas reinhardtii
Cre02.g116600 Chlamydomonas reinhardtii
Cre02.g144050 Chlamydomonas reinhardtii
Cre02.g144100 Chlamydomonas reinhardtii
Cre03.g157000 Chlamydomonas reinhardtii
Cre03.g202550 Chlamydomonas reinhardtii
Cre03.g204050 Chlamydomonas reinhardtii
Cre03.g204100 Chlamydomonas reinhardtii
Cre03.g205250 Chlamydomonas reinhardtii
Cre04.g211900 Chlamydomonas reinhardtii
Cre05.g233450 Chlamydomonas reinhardtii
Cre06.g278093 Chlamydomonas reinhardtii
Cre06.g278094 Chlamydomonas reinhardtii
Cre06.g311950 Chlamydomonas reinhardtii
Cre07.g325050 Chlamydomonas reinhardtii
Cre08.g382560 Chlamydomonas reinhardtii
Cre09.g388393 Chlamydomonas reinhardtii
Cre09.g390750 Chlamydomonas reinhardtii
Cre09.g414750 Chlamydomonas reinhardtii
Cre09.g414900 Chlamydomonas reinhardtii
Cre09.g415100 Chlamydomonas reinhardtii
Cre09.g417250 Chlamydomonas reinhardtii
Cre10.g430100 Chlamydomonas reinhardtii
Cre10.g430250 Chlamydomonas reinhardtii
Cre11.g467660 Chlamydomonas reinhardtii
Cre12.g502450 Chlamydomonas reinhardtii
Cre12.g502500 Chlamydomonas reinhardtii
Cre12.g561050 Chlamydomonas reinhardtii
Cre13.g577050 Chlamydomonas reinhardtii
Cre13.g577400 Chlamydomonas reinhardtii
Cre14.g622050 Chlamydomonas reinhardtii
Cre17.g721750 Chlamydomonas reinhardtii
Cre24.g755397 Chlamydomonas reinhardtii
CsaV3_3G039220 Cucumis sativus L.
CSS0003922 Camellia sinensis var. sinensis
CSS0007994 Camellia sinensis var. sinensis
CSS0019674 Camellia sinensis var. sinensis
CSS0038023 Camellia sinensis var. sinensis
CSS0043383 Camellia sinensis var. sinensis
CSS0046203 Camellia sinensis var. sinensis
DCAR_013583 Daucus carota
Dinv18082 Davidia involucrata
Dinv18083 Davidia involucrata
Dinv20354 Davidia involucrata
Duzib106G0148 Durio zibethinus
EL10Ac3g07020 Beta vulgaris
Eucgr.A02396 Eucalyptus grandis
FAN02G1024 Fragaria x ananassa
FAN05G2241 Fragaria x ananassa
FAN14G1649 Fragaria x ananassa
FvH4_6g23260 Fragaria vesca
Glyma.02G181500 Glycine max
Glyma.03G139300 Glycine max
Glyma.10G099700 Glycine max
Gohir.A09G124100 Gossypium hirsutum
Gohir.D09G120900 Gossypium hirsutum
Gorai.006G138400 Gossypium raimondii
GSVIVG01033325001 Vitis vinifera
HanXRQChr15g0491231 Helianthus annuus
Haze_19902 Corylus avellana
Hma1.2p1_0247F.1_g101890 Hydrangea macrophylla
HPP92_020394 Vanilla planifolia
Hund24733 Selenicereus undatus
Hund24740 Selenicereus undatus
Lalb_Chr02g0156371 Lupinus albus
Lalb_Chr05g0213601 Lupinus albus
Lj2C379G3 Lonicera japonica
Lj5g0012411 Lotus japonicus
Lsat_1_v5_gn_9_27501 Lactuca sativa
Manes.09G028900 Manihot esculenta
Mapoly0126s0040 Marchantia polymorpha
MBI04_g28751_MAGBIO Magnolia biondii
MCO05G401 Micromonas commoda
MCO07G631 Micromonas commoda
MD12G1066900 Malus domestica
MD14G1067400 Malus domestica
Medtr1g052730 Medicago truncatula
MELO3C009666.2 Cucumis melo
Migut.O00832 Erythranthe guttata
MSTRG.6447 Avicennia marina
Nitab4.5_0002220g0030 Nicotiana tabacum
Nitab4.5_0004660g0040 Nicotiana tabacum
Nn2g15471 Nelumbo nucifera
Oeu008132.1 Olea europaea
Oeu033778.1 Olea europaea
Os03g0174300 Oryza sativa ssp. japonica
Peaxi162Scf00650g00226 Petunia axillaris
PGR004G0326 Punica granatum
PGSC0003DMG400019789 Solanum tuberosum
Phvul.007G255200 Phaseolus vulgaris
Potri.006G054800 Populus trichocarpa
Pp3c4_26380 Physcomitrium patens
Prupe.7G067200 Prunus persica
Psat6g126960 Pisum sativum
PSO541G4071 Papaver somniferum
PSO675G4641 Papaver somniferum
QL07p021650 Quercus lobata
RcHm_v2.0_Chr3g0481191 Rosa chinensis
RcHm_v2.0_Chr4g0387421 Rosa chinensis
RcHm_v2.0_Chr4g0392011 Rosa chinensis
Rhsim04G0099800 Rhododendron simsii
Sabra06G0038900 Salix brachista
SalBow6G2199 Salvia bowleyana
SalBow6G4126 Salvia bowleyana
Sc19g0006690 Simmondsia chinensis
Sed0006443 Sechium edule
Sed0010803 Sechium edule
SEGI_15501 Sequoiadendron giganteum
SEGI_17027 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30444 Striga asiatica
SHI29204 Sapria himalayana
SHI29208 Sapria himalayana
SHI29212 Sapria himalayana
SHI29213 Sapria himalayana
SMO153G0012 Selaginella moellendorffii
Solyc03g063750.3 Solanum lycopersicum
Sopen03g017080 Solanum pennellii
Sp5g04990 Schrenkiella parvula
TAR623G0503 Trochodendron aralioides
THA.LOC104802308 Tarenaya hassleriana
Thecc.05G161800 Theobroma cacao
Thhalv10005794m.g Eutrema salsugineum
TPR.G29928 Trifolium pratense
TWI74G0086 Tripterygium wilfordii
TWI77G0335 Tripterygium wilfordii
unitig_578.g15987 Utricularia gibba
vmacro09093 Vaccinium macrocarpon
VMungo0720G0406 Vigna mungo
Zm00001eb402060 Zea mays

User provided reference genes

Program Settings