Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01390 Brassica napus
A01p01400 Brassica napus
Aa31LG6G14430 Aethionema arabicum
Actinidia11991 Actinidia chinensis
Ah.02g125510 Amaranthus hybridus
AL7G13200 Arabidopsis lyrata
AL7G13210 Arabidopsis lyrata
Aqoxy6G02701 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GV60EB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HR4B5C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZW9ABU Arachis hypogaea
AT4G37550 Arabidopsis thaliana
AT4G37560 Arabidopsis thaliana
ATR0019G017 Amborella trichopoda
ATR0019G021 Amborella trichopoda
ATR0515G001 Amborella trichopoda
Atru.chr3.158 Acer truncatum
Atru.chr3.187 Acer truncatum
AUR62003988 Chenopodium quinoa
AUR62003989 Chenopodium quinoa
AUR62040257 Chenopodium quinoa
BcaNung05904 Brassica carinata
BcaNung05905 Brassica carinata
BcaNung05906 Brassica carinata
BolC1t00152H Brassica oleracea
BolC1t00153H Brassica oleracea
BraA01t00135Z Brassica rapa
BraA01t00136Z Brassica rapa
C01p01570 Brassica napus
C01p01580 Brassica napus
CAN.G1075.22 Capsicum annuum
CANSAT01G0675 Cannabis sativa
CARHR245950 Cardamine hirsuta
CARHR245960 Cardamine hirsuta
Carub.0007s0271 Capsella rubella
Ca_13922_v3 Cicer arietinum L.
Cc07_g06910 Coffea canephora
Cc07_g06920 Coffea canephora
CDE04G2054 Ceratophyllum demersum
CDE07G1667 Ceratophyllum demersum
Cfa004110 Carpinus fangiana
Cfa004111 Carpinus fangiana
Cfa004112 Carpinus fangiana
Cfa025028 Carpinus fangiana
Ciclev10025794m.g Citrus clementina
CiPaw.02G003700 Carya illinoinensis
ClCG01G017440 Citrullus lanatus
COL.COLO4_11551 Corchorus olitorius
COL.COLO4_11552 Corchorus olitorius
Cpa.g.sc6.39 Carica papaya
Cre16.g691750 Chlamydomonas reinhardtii
CsaV3_6G043980 Cucumis sativus L.
CSS0001342 Camellia sinensis var. sinensis
CSS0039286 Camellia sinensis var. sinensis
CSS0041574 Camellia sinensis var. sinensis
CSS0047878 Camellia sinensis var. sinensis
DCAR_000330 Daucus carota
DCAR_025786 Daucus carota
DCAR_025787 Daucus carota
Dinv26913 Davidia involucrata
Dinv30076 Davidia involucrata
Duzib187G0102 Durio zibethinus
Duzib264G0002 Durio zibethinus
ECA238G2426 Erigeron canadensis
EL10Ac1g01850 Beta vulgaris
EL10Ac4g09101 Beta vulgaris
EL10Ac4g09102 Beta vulgaris
EL10Ac5g12500 Beta vulgaris
EL10Ac6g15639 Beta vulgaris
Eucgr.H02294 Eucalyptus grandis
Eucgr.H02295 Eucalyptus grandis
FAN19G2263 Fragaria x ananassa
FAN23G0931 Fragaria x ananassa
FAN26G3311 Fragaria x ananassa
FAN28G1106 Fragaria x ananassa
FAN28G1176 Fragaria x ananassa
FvH4_1g17390 Fragaria vesca
Glyma.17G161900 Glycine max
Gohir.A11G216400 Gossypium hirsutum
Gohir.D11G207000 Gossypium hirsutum
Gorai.007G222100 Gossypium raimondii
GSVIVG01000135001 Vitis vinifera
GSVIVG01000137001 Vitis vinifera
GSVIVG01000140001 Vitis vinifera
HanXRQChr14g0449471 Helianthus annuus
Haze_15301 Corylus avellana
Hma1.2p1_0730F.1_g209845 Hydrangea macrophylla
HPP92_014148 Vanilla planifolia
HPP92_014166 Vanilla planifolia
Hund13938 Selenicereus undatus
Lalb_Chr05g0225981 Lupinus albus
Lalb_Chr16g0389191 Lupinus albus
Lj4A160T62 Lonicera japonica
Lj4C160G10 Lonicera japonica
Lj4g0006645 Lotus japonicus
Lj4g0023143 Lotus japonicus
Lsat_1_v5_gn_2_82860 Lactuca sativa
Manes.12G110500 Manihot esculenta
MBI16_g09132_MAGBIO Magnolia biondii
MCO01G322 Micromonas commoda
MD00G1015600 Malus domestica
MD00G1015700 Malus domestica
MD15G1294800 Malus domestica
Medtr4g095660 Medicago truncatula
MELO3C007621.2 Cucumis melo
Migut.L00204 Erythranthe guttata
MSTRG.15357 Avicennia marina
Nitab4.5_0000032g0200 Nicotiana tabacum
Nitab4.5_0000651g0100 Nicotiana tabacum
Nitab4.5_0006069g0040 Nicotiana tabacum
Nn1g04599 Nelumbo nucifera
Oeu013288.2 Olea europaea
Oeu014230.2 Olea europaea
Oeu040626.2 Olea europaea
Os01g0764900 Oryza sativa ssp. japonica
Peaxi162Scf00264g00117 Petunia axillaris
PGR102G2907 Punica granatum
PGSC0003DMG400024965 Solanum tuberosum
Phvul.003G236000 Phaseolus vulgaris
Potri.005G145400 Populus trichocarpa
Pp3c3_32950 Physcomitrium patens
PRCOL_00001243 Prasinoderma coloniale
Prupe.6G223000 Prunus persica
Psat0ss839g0200 Pisum sativum
Psat5g012000 Pisum sativum
PSO541G4466 Papaver somniferum
RcHm_v2.0_Chr2g0107581 Rosa chinensis
RcHm_v2.0_Chr2g0107621 Rosa chinensis
Rhsim10G0101200 Rhododendron simsii
Sabra05G0116200 Salix brachista
Sabra07G0047000 Salix brachista
SalBow5G1134 Salvia bowleyana
SalBow5G1710 Salvia bowleyana
Sc16g0000120 Simmondsia chinensis
Sc16g0000130 Simmondsia chinensis
Sc16g0000140 Simmondsia chinensis
Sed0025668 Sechium edule
SEGI_03818 Sequoiadendron giganteum
SEGI_13173 Sequoiadendron giganteum
SEGI_23023 Sequoiadendron giganteum
SEGI_27901 Sequoiadendron giganteum
SEGI_32720 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09394 Striga asiatica
SGA_v2.0_scaffold21G09395 Striga asiatica
SMO141G0231 Selaginella moellendorffii
SMO170G0023 Selaginella moellendorffii
Solyc02g092530.4 Solanum lycopersicum
Sopen02g037110 Solanum pennellii
Sp7g35230 Schrenkiella parvula
Sp7g35240 Schrenkiella parvula
TAR628G0028 Trochodendron aralioides
THA.LOC104819873 Tarenaya hassleriana
Thecc.01G069900 Theobroma cacao
Thecc.01G070200 Theobroma cacao
Thhalv10025178m.g Eutrema salsugineum
Thhalv10025180m.g Eutrema salsugineum
TPR.G23871 Trifolium pratense
TPR.G23896 Trifolium pratense
TWI09G0703 Tripterygium wilfordii
unitig_748.g8394 Utricularia gibba
vmacro05396 Vaccinium macrocarpon
vmacro05397 Vaccinium macrocarpon
VMungo0251G0785 Vigna mungo
Zm00001eb152190 Zea mays
Zm00001eb370290 Zea mays

User provided reference genes

Program Settings