Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12300 Brassica napus
A02p28380 Brassica napus
A03p52530 Brassica napus
A06p47270 Brassica napus
A08p14960 Brassica napus
A09p21070 Brassica napus
Aa31LG6G2950 Aethionema arabicum
Actinidia13459 Actinidia chinensis
Actinidia26708 Actinidia chinensis
Actinidia31373 Actinidia chinensis
Actinidia32347 Actinidia chinensis
AL7G33270 Arabidopsis lyrata
AL8G15540 Arabidopsis lyrata
Aqoxy1G01487 Aquilegia oxysepala
AT4G20880 Arabidopsis thaliana
AT5G44350 Arabidopsis thaliana
ATR0763G278 Amborella trichopoda
Atru.chr10.781 Acer truncatum
BcaB03g11678 Brassica carinata
BcaB07g30530 Brassica carinata
BcaB07g30950 Brassica carinata
BcaC01g00679 Brassica carinata
BcaC03g16656 Brassica carinata
BcaC04g21838 Brassica carinata
BcaC06g31624 Brassica carinata
BcaC06g34566 Brassica carinata
BcaC09g51296 Brassica carinata
BcaNung04140 Brassica carinata
BcaNung05413 Brassica carinata
BcaNung07356 Brassica carinata
BolC1t01423H Brassica oleracea
BolC2t10530H Brassica oleracea
BolC3t20584H Brassica oleracea
BolC7t43237H Brassica oleracea
BolC7t43238H Brassica oleracea
BolC7t45599H Brassica oleracea
BolC9t55570H Brassica oleracea
BraA01t01174Z Brassica rapa
BraA02t07875Z Brassica rapa
BraA03t14328Z Brassica rapa
BraA06t27598Z Brassica rapa
BraA08t33477Z Brassica rapa
BraA09t37708Z Brassica rapa
C01p14710 Brassica napus
C02p44970 Brassica napus
C03p83040 Brassica napus
C07p27070 Brassica napus
C07p27080 Brassica napus
C07p50970 Brassica napus
C09p26810 Brassica napus
CANSAT35G0942 Cannabis sativa
CARHR178780 Cardamine hirsuta
CARHR227440 Cardamine hirsuta
Carub.0007s2055 Capsella rubella
Carub.0008s0412 Capsella rubella
Ca_00869_v3 Cicer arietinum L.
Cc09_g07570 Coffea canephora
Cfa000806 Carpinus fangiana
Ciclev10015182m.g Citrus clementina
CiPaw.09G142800 Carya illinoinensis
ClCG01G025280 Citrullus lanatus
ClCG03G008260 Citrullus lanatus
COL.COLO4_26846 Corchorus olitorius
Cpa.g.c43226 Carica papaya
CsaV3_1G037140 Cucumis sativus L.
CsaV3_6G052500 Cucumis sativus L.
CSS0026993 Camellia sinensis var. sinensis
DCAR_003840 Daucus carota
Dinv06927 Davidia involucrata
Duzib192G0088 Durio zibethinus
Duzib235G0167 Durio zibethinus
ECA247G2099 Erigeron canadensis
Eucgr.D00100 Eucalyptus grandis
FAN11G3528 Fragaria x ananassa
FAN14G2350 Fragaria x ananassa
FAN16G1832 Fragaria x ananassa
FAN21G2878 Fragaria x ananassa
FAN25G2552 Fragaria x ananassa
FvH4_3g10700 Fragaria vesca
FvH4_6g34930 Fragaria vesca
Glyma.09G026200 Glycine max
Glyma.15G132400 Glycine max
Gohir.A06G119900 Gossypium hirsutum
Gohir.D06G124500 Gossypium hirsutum
Gorai.010G144500 Gossypium raimondii
GSVIVG01021709001 Vitis vinifera
HanXRQChr08g0237311 Helianthus annuus
Haze_05867 Corylus avellana
HPP92_013922 Vanilla planifolia
Lalb_Chr07g0189031 Lupinus albus
Lalb_Chr18g0058121 Lupinus albus
Lj1P1160T59 Lonicera japonica
Lj4g0027556 Lotus japonicus
Lj6g0010125 Lotus japonicus
Lsat_1_v5_gn_9_25860 Lactuca sativa
Manes.06G058700 Manihot esculenta
Manes.14G124700 Manihot esculenta
MBI02_g39880_MAGBIO Magnolia biondii
MD05G1269300 Malus domestica
MD10G1248100 Malus domestica
Medtr2g031350 Medicago truncatula
Medtr4g094532 Medicago truncatula
MELO3C002832.2 Cucumis melo
MELO3C007060.2 Cucumis melo
Migut.M01906 Erythranthe guttata
MSTRG.16299 Avicennia marina
MSTRG.7546 Avicennia marina
Nitab4.5_0000076g0140 Nicotiana tabacum
Nitab4.5_0001583g0210 Nicotiana tabacum
Nitab4.5_0004204g0010 Nicotiana tabacum
Nn1g03508 Nelumbo nucifera
Nn1g07139 Nelumbo nucifera
Nn2g11492 Nelumbo nucifera
Oeu015165.2 Olea europaea
Oeu040075.1 Olea europaea
Oeu041117.1 Olea europaea
Oeu058488.1 Olea europaea
Oeu060316.1 Olea europaea
Peaxi162Scf00395g00054 Petunia axillaris
PGR083G0011 Punica granatum
PGSC0003DMG400021011 Solanum tuberosum
PGSC0003DMG400021114 Solanum tuberosum
Phvul.006G126000 Phaseolus vulgaris
Potri.001G464300 Populus trichocarpa
Potri.011G162400 Populus trichocarpa
Prupe.4G095400 Prunus persica
Psat1g165840 Pisum sativum
Psat7g094000 Pisum sativum
PSO675G0053 Papaver somniferum
QL05p063597 Quercus lobata
QL93p0201_0023 Quercus lobata
RcHm_v2.0_Chr2g0145901 Rosa chinensis
RcHm_v2.0_Chr5g0017411 Rosa chinensis
Rhsim02G0163100 Rhododendron simsii
Sabra11G0141400 Salix brachista
Sabra16G0313900 Salix brachista
Sabra16G0315300 Salix brachista
Sc03g0008520 Simmondsia chinensis
Sed0021177 Sechium edule
Sed0021635 Sechium edule
Sed0024509 Sechium edule
SGA_v2.0_scaffold1G00275 Striga asiatica
SGA_v2.0_scaffold223G42870 Striga asiatica
SHI24805 Sapria himalayana
Solyc02g022920.1 Solanum lycopersicum
Solyc02g070040.1 Solanum lycopersicum
Sopen02g006550 Solanum pennellii
Sopen02g019200 Solanum pennellii
Sp2g09190 Schrenkiella parvula
Sp7g18970 Schrenkiella parvula
THA.LOC104806249 Tarenaya hassleriana
THA.LOC104812214 Tarenaya hassleriana
Thecc.06G003200 Theobroma cacao
Thhalv10003311m.g Eutrema salsugineum
Thhalv10025304m.g Eutrema salsugineum
TPR.G27520 Trifolium pratense
TPR.G30380 Trifolium pratense
TWI15G0126 Tripterygium wilfordii
TWI38G0672 Tripterygium wilfordii
unitig_32.g10874 Utricularia gibba
unitig_32.g11678 Utricularia gibba
unitig_32.g11679 Utricularia gibba
unitig_748.g7348 Utricularia gibba
unitig_748.g8282 Utricularia gibba
VMungo0540G0062 Vigna mungo

User provided reference genes

Program Settings