Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03950 Brassica napus
A03p08220 Brassica napus
A06p26270 Brassica napus
A10p22240 Brassica napus
A10p22260 Brassica napus
Aa31LG5G13610 Aethionema arabicum
Actinidia04568 Actinidia chinensis
Actinidia08739 Actinidia chinensis
Actinidia34301 Actinidia chinensis
AL3G12740 Arabidopsis lyrata
AL6G28200 Arabidopsis lyrata
Aqoxy3G02070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea
AT3G03130 Arabidopsis thaliana
AT5G17160 Arabidopsis thaliana
Atru.chr12.1996 Acer truncatum
Atru.chr9.294 Acer truncatum
Atru.chr9.295 Acer truncatum
BcaB01g04949 Brassica carinata
BcaB01g05216 Brassica carinata
BcaB07g32711 Brassica carinata
BcaB08g36802 Brassica carinata
BcaC01g02808 Brassica carinata
BcaC03g18533 Brassica carinata
BcaC04g18829 Brassica carinata
BcaC04g18830 Brassica carinata
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus
BolC1t05844H Brassica oleracea
BolC2t06791H Brassica oleracea
BolC3t13447H Brassica oleracea
BolC3t18269H Brassica oleracea
BolC9t58840H Brassica oleracea
BolC9t58843H Brassica oleracea
BraA01t04590Z Brassica rapa
BraA02t05360Z Brassica rapa
BraA03t10142Z Brassica rapa
BraA10t44283Z Brassica rapa
BraA10t44285Z Brassica rapa
C02p08770 Brassica napus
C03p09510 Brassica napus
C03p09520 Brassica napus
C03p60040 Brassica napus
C03p60050 Brassica napus
C09p60050 Brassica napus
C09p60080 Brassica napus
CANSAT35G1347 Cannabis sativa
CARHR077150 Cardamine hirsuta
CARHR196070 Cardamine hirsuta
Carub.0003s0228 Capsella rubella
Carub.0006s1534 Capsella rubella
Ca_04929_v3 Cicer arietinum L.
Cc02_g00400 Coffea canephora
CDE02G2994 Ceratophyllum demersum
CDE11G0117 Ceratophyllum demersum
Cfa015894 Carpinus fangiana
Ciclev10023566m.g Citrus clementina
Ciclev10023587m.g Citrus clementina
CiPaw.05G237300 Carya illinoinensis
COL.COLO4_06387 Corchorus olitorius
Cpa.g.sc39.57 Carica papaya
CsaV3_5G015680 Cucumis sativus L.
CSS0010494 Camellia sinensis var. sinensis
CSS0016343 Camellia sinensis var. sinensis
DCAR_014573 Daucus carota
Dinv29170 Davidia involucrata
Dinv29171 Davidia involucrata
Duzib106G1502 Durio zibethinus
Duzib128G1020 Durio zibethinus
Duzib128G1713 Durio zibethinus
ECA246G3276 Erigeron canadensis
ECA247G1921 Erigeron canadensis
Eucgr.G02658 Eucalyptus grandis
Glyma.11G092600 Glycine max
Glyma.12G018900 Glycine max
Gohir.A08G223300 Gossypium hirsutum
Gohir.D08G243500 Gossypium hirsutum
Gorai.004G259400 Gossypium raimondii
GSVIVG01024442001 Vitis vinifera
GSVIVG01024444001 Vitis vinifera
HanXRQChr17g0541641 Helianthus annuus
HanXRQChr17g0541651 Helianthus annuus
HanXRQChr17g0554401 Helianthus annuus
Haze_00596 Corylus avellana
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla
Hund21092 Selenicereus undatus
Lalb_Chr01g0001001 Lupinus albus
Lalb_Chr09g0320301 Lupinus albus
Lalb_Chr16g0376621 Lupinus albus
Lj3A889G76 Lonicera japonica
Lj3g0021850 Lotus japonicus
Lsat_1_v5_gn_2_72700 Lactuca sativa
Lsat_1_v5_gn_3_135820 Lactuca sativa
Lsat_1_v5_gn_3_37901 Lactuca sativa
Lsat_1_v5_gn_3_37921 Lactuca sativa
Lsat_1_v5_gn_4_37260 Lactuca sativa
Lsat_1_v5_gn_8_135240 Lactuca sativa
Manes.08G164200 Manihot esculenta
Manes.09G124200 Manihot esculenta
MD01G1233900 Malus domestica
MD07G1306000 Malus domestica
Medtr4g077590 Medicago truncatula
Medtr8g008690 Medicago truncatula
MELO3C026497.2 Cucumis melo
MELO3C026562.2 Cucumis melo
MELO3C028918.2 Cucumis melo
MELO3C029241.2 Cucumis melo
Migut.F00952 Erythranthe guttata
MSTRG.13 Avicennia marina
Nitab4.5_0000021g0310 Nicotiana tabacum
Nitab4.5_0000115g0360 Nicotiana tabacum
Nitab4.5_0002193g0040 Nicotiana tabacum
Nitab4.5_0004928g0010 Nicotiana tabacum
Nitab4.5_0005081g0100 Nicotiana tabacum
Nn1g01977 Nelumbo nucifera
Nn3g17187 Nelumbo nucifera
Nn3g18542 Nelumbo nucifera
Nn3g19291 Nelumbo nucifera
Oeu049055.1 Olea europaea
Oeu061066.1 Olea europaea
Peaxi162Scf00745g00852 Petunia axillaris
Peaxi162Scf00815g00349 Petunia axillaris
PGR042G3162 Punica granatum
PGSC0003DMG400026934 Solanum tuberosum
Phvul.011G021300 Phaseolus vulgaris
Potri.001G323900 Populus trichocarpa
Potri.013G081600 Populus trichocarpa
Potri.019G046801 Populus trichocarpa
Prupe.2G324100 Prunus persica
Psat7g056320 Pisum sativum
Psat7g171480 Pisum sativum
PSO017G1908 Papaver somniferum
PSO478G3049 Papaver somniferum
QL09p025753 Quercus lobata
Rhsim03G0220700 Rhododendron simsii
Sabra13G0071500 Salix brachista
Sabra19G0057800 Salix brachista
Sabra19G0058100 Salix brachista
SalBow2G2429 Salvia bowleyana
SalBow4G0562 Salvia bowleyana
SalBow4G2051 Salvia bowleyana
Sc19g0000210 Simmondsia chinensis
Sed0000182 Sechium edule
Sed0018309 Sechium edule
Solyc06g072810.4 Solanum lycopersicum
Solyc10g018880.1 Solanum lycopersicum
Sopen06g029190 Solanum pennellii
Sp3g02170 Schrenkiella parvula
Sp6g27070 Schrenkiella parvula
TAR374G0649 Trochodendron aralioides
TAR374G1619 Trochodendron aralioides
THA.LOC104802916 Tarenaya hassleriana
Thecc.05G208300 Theobroma cacao
Thhalv10013127m.g Eutrema salsugineum
Thhalv10022236m.g Eutrema salsugineum
TPR.G8414 Trifolium pratense
TWI34G1775 Tripterygium wilfordii
TWI60G0676 Tripterygium wilfordii
TWI60G1132 Tripterygium wilfordii
unitig_0.g2432 Utricularia gibba
unitig_52.g17695 Utricularia gibba
vmacro06502 Vaccinium macrocarpon
VMungo1127G2117 Vigna mungo
VMungo1383G3237 Vigna mungo

User provided reference genes

Program Settings