Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15760 Brassica napus
Aa31LG7G4220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.426 Anthoceros agrestis
Actinidia29816 Actinidia chinensis
Actinidia38000 Actinidia chinensis
Ah.03g141070 Amaranthus hybridus
AL1G32320 Arabidopsis lyrata
Aqoxy6G01151 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0FN7J8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0W95S5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1P6ZJY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4DL9G8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5L5Q4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C7KMBV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CV7JLA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D196G9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GKM7KP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5S4YV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IMH851 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K82YC3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KUDP7J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6716C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0ETKP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PQF71L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TKUN13 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WKA37H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTH6WV Arachis hypogaea
AT1G19600 Arabidopsis thaliana
ATR0568G055 Amborella trichopoda
Atru.chr13.442 Acer truncatum
Atru.chr3.817 Acer truncatum
Atru.chr3.818 Acer truncatum
AUR62004081 Chenopodium quinoa
BcaB07g31974 Brassica carinata
BcaB07g31976 Brassica carinata
BcaC05g25831 Brassica carinata
BcaNung02937 Brassica carinata
BolC5t30515H Brassica oleracea
BolC5t30978H Brassica oleracea
BraA06t24685Z Brassica rapa
C04p08650 Brassica napus
C05p18070 Brassica napus
CAN.G1226.41 Capsicum annuum
CANSAT25G3633 Cannabis sativa
CARHR020140 Cardamine hirsuta
Carub.0001s1914 Capsella rubella
Ca_13360_v3 Cicer arietinum L.
Ca_15502_v3 Cicer arietinum L.
Cc10_g02630 Coffea canephora
CDE02G3095 Ceratophyllum demersum
CDE06G0346 Ceratophyllum demersum
CDE06G2583 Ceratophyllum demersum
Cfa018181 Carpinus fangiana
Ciclev10001409m.g Citrus clementina
CiPaw.15G081500 Carya illinoinensis
CiPaw.16G060300 Carya illinoinensis
ClCG08G014870 Citrullus lanatus
COL.COLO4_26281 Corchorus olitorius
Cpa.g.sc800.2 Carica papaya
Cre07.g331800 Chlamydomonas reinhardtii
CsaV3_2G028890 Cucumis sativus L.
CSS0016695 Camellia sinensis var. sinensis
CSS0029393 Camellia sinensis var. sinensis
DCAR_013830 Daucus carota
DCAR_025956 Daucus carota
Dinv36104 Davidia involucrata
Dinv39438 Davidia involucrata
Dinv40005 Davidia involucrata
Duzib041G0612 Durio zibethinus
Duzib093G2062 Durio zibethinus
ECA246G0240 Erigeron canadensis
EL10Ac6g15533 Beta vulgaris
Eucgr.F01882 Eucalyptus grandis
FAN15G0341 Fragaria x ananassa
FAN20G0470 Fragaria x ananassa
FAN27G1442 Fragaria x ananassa
FvH4_2g39580 Fragaria vesca
Glyma.04G030600 Glycine max
Glyma.09G161200 Glycine max
Glyma.14G073100 Glycine max
Glyma.17G251900 Glycine max
Gohir.A05G192700 Gossypium hirsutum
Gohir.A05G258700 Gossypium hirsutum
Gohir.D05G195900 Gossypium hirsutum
Gohir.D05G260400 Gossypium hirsutum
Gorai.009G200800 Gossypium raimondii
Gorai.009G272300 Gossypium raimondii
GSVIVG01006581001 Vitis vinifera
GSVIVG01009736001 Vitis vinifera
GSVIVG01024614001 Vitis vinifera
GSVIVG01034297001 Vitis vinifera
HanXRQChr05g0151741 Helianthus annuus
Haze_17937 Corylus avellana
HPP92_000286 Vanilla planifolia
Hund13994 Selenicereus undatus
Hund16444 Selenicereus undatus
Lalb_Chr22g0354691 Lupinus albus
Lj1g0022848 Lotus japonicus
Lj5g0013851 Lotus japonicus
Lsat_1_v5_gn_5_27761 Lactuca sativa
Manes.05G157500 Manihot esculenta
Manes.18G022600 Manihot esculenta
Mapoly0012s0094 Marchantia polymorpha
MBI10_g06734_MAGBIO Magnolia biondii
MCO08G314 Micromonas commoda
MCO09G728 Micromonas commoda
MCO11G065 Micromonas commoda
MD08G1029000 Malus domestica
MD15G1024500 Malus domestica
Medtr3g112040 Medicago truncatula
Medtr4g012760 Medicago truncatula
MELO3C010959.2 Cucumis melo
Migut.C00751 Erythranthe guttata
MSTRG.1266 Avicennia marina
MSTRG.25186 Avicennia marina
Nitab4.5_0003265g0120 Nicotiana tabacum
Nitab4.5_0008031g0020 Nicotiana tabacum
Nn5g29655 Nelumbo nucifera
Oeu002826.1 Olea europaea
Oeu063615.3 Olea europaea
Os01g0105900 Oryza sativa ssp. japonica
Peaxi162Scf00140g00021 Petunia axillaris
Peaxi162Scf00552g00045 Petunia axillaris
PGR031G3321 Punica granatum
PGSC0003DMG400003693 Solanum tuberosum
Phvul.001G013100 Phaseolus vulgaris
Phvul.009G059500 Phaseolus vulgaris
Potri.002G034000 Populus trichocarpa
Potri.005G229100 Populus trichocarpa
Pp3c18_21330 Physcomitrium patens
Pp3c21_3850 Physcomitrium patens
Pp3c3_21460 Physcomitrium patens
PRCOL_00006221 Prasinoderma coloniale
Prupe.1G376800 Prunus persica
Psat5g016560 Pisum sativum
PSO170G4681 Papaver somniferum
PSO210G1862 Papaver somniferum
QL02p009229 Quercus lobata
RcHm_v2.0_Chr6g0301341 Rosa chinensis
Rhsim07G0240800 Rhododendron simsii
RhsimUnG0051700 Rhododendron simsii
Sabra02G0027300 Salix brachista
Sabra05G0177000 Salix brachista
Sc15g0003400 Simmondsia chinensis
Sed0003816 Sechium edule
Sed0017600 Sechium edule
SEGI_26481 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05816 Striga asiatica
SMO119G0092 Selaginella moellendorffii
Solyc04g080580.3 Solanum lycopersicum
Sopen04g034170 Solanum pennellii
Sp1g17440 Schrenkiella parvula
TAR376G0140 Trochodendron aralioides
TAR628G1187 Trochodendron aralioides
THA.LOC104811379 Tarenaya hassleriana
Thecc.08G030000 Theobroma cacao
Thhalv10008038m.g Eutrema salsugineum
TPR.G12384 Trifolium pratense
TPR.G39858 Trifolium pratense
TWI36G0587 Tripterygium wilfordii
unitig_37.g12996 Utricularia gibba
vmacro04534 Vaccinium macrocarpon
VMungo0647G0812 Vigna mungo
VMungo1309G1848 Vigna mungo
Zm00001eb126820 Zea mays
Zm00001eb334210 Zea mays

User provided reference genes

Program Settings