Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p14020 Brassica napus
A07p37330 Brassica napus
Aa31LG4G10150 Aethionema arabicum
Aa31LG7G7080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1350 Anthoceros agrestis
Actinidia12367 Actinidia chinensis
Actinidia36661 Actinidia chinensis
Ah.03g137320 Amaranthus hybridus
AL1G36680 Arabidopsis lyrata
AL2G30410 Arabidopsis lyrata
AL337U10010 Arabidopsis lyrata
Aqoxy3G00082 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06RDDY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5SBZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A6Q8V1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B49LBP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EY5UDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5A53T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5DY87 Arachis hypogaea
AT1G23110 Arabidopsis thaliana
AT1G70900 Arabidopsis thaliana
ATR0564G234 Amborella trichopoda
Atru.chr11.473 Acer truncatum
AUR62014183 Chenopodium quinoa
BcaB03g14168 Brassica carinata
BcaB03g14853 Brassica carinata
BcaC05g26219 Brassica carinata
BcaC06g35023 Brassica carinata
BcaC08g46539 Brassica carinata
BolC2t08881H Brassica oleracea
BolC6t39558H Brassica oleracea
BolC6t39560H Brassica oleracea
BolC7t42590H Brassica oleracea
BraA07t29156Z Brassica rapa
BraA07t31292Z Brassica rapa
C02p28370 Brassica napus
C06p45000 Brassica napus
C06p45020 Brassica napus
C07p20600 Brassica napus
CAN.G150.4 Capsicum annuum
CANSAT64G1906 Cannabis sativa
CARHR023490 Cardamine hirsuta
CARHR064180 Cardamine hirsuta
Carub.0001s2263 Capsella rubella
Carub.0002s1769 Capsella rubella
Ca_12581_v3 Cicer arietinum L.
Ca_12594_v3 Cicer arietinum L.
CBR_g17941 Chara braunii
Cc07_g18460 Coffea canephora
Cc11_g08440 Coffea canephora
Cc11_g08450 Coffea canephora
CDE05G3602 Ceratophyllum demersum
Cfa008626 Carpinus fangiana
Ciclev10016392m.g Citrus clementina
CiPaw.06G047000 Carya illinoinensis
ClCG01G006270 Citrullus lanatus
COL.COLO4_13153 Corchorus olitorius
Cpa.g.c36802 Carica papaya
Cre03.g160850 Chlamydomonas reinhardtii
Cre03.g173550 Chlamydomonas reinhardtii
CsaV3_5G028400 Cucumis sativus L.
CSS0022047 Camellia sinensis var. sinensis
CSS0026867 Camellia sinensis var. sinensis
DCAR_000574 Daucus carota
DCAR_005097 Daucus carota
DCAR_009878 Daucus carota
DCAR_009985 Daucus carota
DCAR_023592 Daucus carota
DCAR_030229 Daucus carota
Dinv07664 Davidia involucrata
Dinv14417 Davidia involucrata
Duzib248G1431 Durio zibethinus
Duzib251G0662 Durio zibethinus
ECA233G2687 Erigeron canadensis
Eucgr.G02180 Eucalyptus grandis
FAN07G2049 Fragaria x ananassa
FAN12G2104 Fragaria x ananassa
FAN17G0423 Fragaria x ananassa
FAN22G2140 Fragaria x ananassa
FvH4_4g32670 Fragaria vesca
Glyma.19G064200 Glycine max
Gohir.A01G151400 Gossypium hirsutum
Gohir.A05G309400 Gossypium hirsutum
Gohir.D01G144600 Gossypium hirsutum
Gohir.D05G310300 Gossypium hirsutum
Gorai.002G178500 Gossypium raimondii
Gorai.009G330900 Gossypium raimondii
GSVIVG01011737001 Vitis vinifera
HanXRQChr08g0212101 Helianthus annuus
HanXRQChr12g0364371 Helianthus annuus
Haze_10980 Corylus avellana
Hma1.2p1_0096F.1_g047700 Hydrangea macrophylla
HPP92_009641 Vanilla planifolia
Hund10268 Selenicereus undatus
Lalb_Chr17g0338501 Lupinus albus
Lj2g0018897 Lotus japonicus
Lj3C871G6 Lonicera japonica
Lj6C744T5 Lonicera japonica
Lsat_1_v5_gn_8_44580 Lactuca sativa
Manes.15G129300 Manihot esculenta
Manes.17G078500 Manihot esculenta
Mapoly0185s0002 Marchantia polymorpha
MBI12_g36036_MAGBIO Magnolia biondii
MBI19_g22783_MAGBIO Magnolia biondii
MCO07G095 Micromonas commoda
MD06G1224600 Malus domestica
MD13G1023800 Malus domestica
MD16G1026500 Malus domestica
Medtr1g031620 Medicago truncatula
MELO3C005303.2 Cucumis melo
Migut.E00438 Erythranthe guttata
Migut.L00354 Erythranthe guttata
Migut.L00977 Erythranthe guttata
MSTRG.2160 Avicennia marina
Nitab4.5_0000426g0230 Nicotiana tabacum
Nitab4.5_0004230g0010 Nicotiana tabacum
Nn3g18267 Nelumbo nucifera
Nn4g24213 Nelumbo nucifera
Oeu018604.1 Olea europaea
Os08g0433200 Oryza sativa ssp. japonica
Os09g0411500 Oryza sativa ssp. japonica
Peaxi162Scf00159g01025 Petunia axillaris
Peaxi162Scf00253g01121 Petunia axillaris
PGR119G0156 Punica granatum
PGSC0003DMG401005954 Solanum tuberosum
Phvul.003G031700 Phaseolus vulgaris
Potri.008G130700 Populus trichocarpa
Potri.010G111300 Populus trichocarpa
Pp3c24_11420 Physcomitrium patens
Pp3c7_7180 Physcomitrium patens
PRCOL_00000603 Prasinoderma coloniale
PRCOL_00001474 Prasinoderma coloniale
Prupe.1G326900 Prunus persica
Psat6g043600 Pisum sativum
PSO017G6162 Papaver somniferum
PSO478G0265 Papaver somniferum
QL01p001285 Quercus lobata
RcHm_v2.0_Chr4g0441581 Rosa chinensis
Rhsim09G0095100 Rhododendron simsii
Rhsim09G0096100 Rhododendron simsii
Sabra10G0081700 Salix brachista
SalBow2G3034 Salvia bowleyana
SalBow8G2030 Salvia bowleyana
SalBow8G2865 Salvia bowleyana
Sc04g0005360 Simmondsia chinensis
Sed0011413 Sechium edule
SGA_v2.0_scaffold234G43615 Striga asiatica
SMO111G0032 Selaginella moellendorffii
Solyc04g007730.3 Solanum lycopersicum
Sopen04g002820 Solanum pennellii
Sp1g20550 Schrenkiella parvula
Sp5g26070 Schrenkiella parvula
TAR374G0923 Trochodendron aralioides
TAR622G0066 Trochodendron aralioides
THA.LOC104809176 Tarenaya hassleriana
Thecc.02G283600 Theobroma cacao
Thhalv10008584m.g Eutrema salsugineum
Thhalv10019522m.g Eutrema salsugineum
TPR.G36967 Trifolium pratense
TWI75G1503 Tripterygium wilfordii
unitig_699.g19535 Utricularia gibba
vmacro10650 Vaccinium macrocarpon
vmacro10653 Vaccinium macrocarpon
VMungo1215G3121 Vigna mungo
Zm00001eb041560 Zea mays
Zm00001eb099420 Zea mays

User provided reference genes

Program Settings