Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15320 Brassica napus
Aa31sc79G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2294 Anthoceros agrestis
Ah.02g127350 Amaranthus hybridus
AL2G27690 Arabidopsis lyrata
Aqoxy3G02627 Aquilegia oxysepala
Aqoxy3G03864 Aquilegia oxysepala
Aqoxy3G03865 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IBNT6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U655LF Arachis hypogaea
AT1G68760 Arabidopsis thaliana
ATR1147G035 Amborella trichopoda
ATR1147G043 Amborella trichopoda
AUR62002942 Chenopodium quinoa
AUR62007751 Chenopodium quinoa
BcaB03g15846 Brassica carinata
BcaB05g24409 Brassica carinata
BcaC03g14984 Brassica carinata
BolC2t08596H Brassica oleracea
BraA02t06593Z Brassica rapa
C02p25170 Brassica napus
C04p37630 Brassica napus
CAN.G184.70 Capsicum annuum
CANSAT64G1327 Cannabis sativa
CARHR061580 Cardamine hirsuta
Carub.0002s1532 Capsella rubella
Ca_19617_v3 Cicer arietinum L.
Ca_30768_v3 Cicer arietinum L.
CBR_g26184 Chara braunii
Cc11_g10790 Coffea canephora
Cc11_g10800 Coffea canephora
CDE10G0275 Ceratophyllum demersum
Cfa008781 Carpinus fangiana
Ciclev10033020m.g Citrus clementina
CiPaw.05G172700 Carya illinoinensis
CiPaw.05G172800 Carya illinoinensis
ClCG00G001430 Citrullus lanatus
ClCG01G005800 Citrullus lanatus
ClCG05G023160 Citrullus lanatus
ClCG05G023170 Citrullus lanatus
COL.COLO4_07852 Corchorus olitorius
Cre03.g184400 Chlamydomonas reinhardtii
CsaV3_5G028890 Cucumis sativus L.
CsaV3_5G033840 Cucumis sativus L.
CSS0026618 Camellia sinensis var. sinensis
DCAR_017507 Daucus carota
DCAR_023699 Daucus carota
DCAR_026707 Daucus carota
DCAR_026708 Daucus carota
Dinv16527 Davidia involucrata
Duzib251G0274 Durio zibethinus
ECA233G1907 Erigeron canadensis
ECA234G2024 Erigeron canadensis
EL10Ac6g14527 Beta vulgaris
Eucgr.B03066 Eucalyptus grandis
FAN02G2314 Fragaria x ananassa
FAN07G1902 Fragaria x ananassa
FAN09G0247 Fragaria x ananassa
FAN09G2488 Fragaria x ananassa
FAN12G0523 Fragaria x ananassa
FAN12G1909 Fragaria x ananassa
FAN12G2228 Fragaria x ananassa
FAN12G2396 Fragaria x ananassa
FAN14G4265 Fragaria x ananassa
FAN17G1675 Fragaria x ananassa
FAN22G0640 Fragaria x ananassa
FAN22G2200 Fragaria x ananassa
FvH4_4g28280 Fragaria vesca
FvH4_4g28300 Fragaria vesca
FvH4_4g28310 Fragaria vesca
FvH4_4g28340 Fragaria vesca
FvH4_6g24180 Fragaria vesca
FvH4_6g51211 Fragaria vesca
Glyma.01G090900 Glycine max
Gohir.A13G071200 Gossypium hirsutum
Gohir.D13G069200 Gossypium hirsutum
Gorai.013G079300 Gossypium raimondii
GSVIVG01011978001 Vitis vinifera
HanXRQChr08g0214461 Helianthus annuus
HanXRQChr16g0528791 Helianthus annuus
HanXRQChr16g0528801 Helianthus annuus
Haze_11793 Corylus avellana
HPP92_021836 Vanilla planifolia
Hund05546 Selenicereus undatus
Lalb_Chr04g0255051 Lupinus albus
Lj2g0025619 Lotus japonicus
Lj3A1022T62 Lonicera japonica
Lsat_1_v5_gn_4_17281 Lactuca sativa
Lsat_1_v5_gn_8_37520 Lactuca sativa
Manes.06G074500 Manihot esculenta
Mapoly0059s0094 Marchantia polymorpha
MBI10_g35795_MAGBIO Magnolia biondii
MCO10G139 Micromonas commoda
MD13G1048800 Malus domestica
MD13G1048900 Malus domestica
MD13G1049100 Malus domestica
MD16G1050100 Malus domestica
MD16G1050200 Malus domestica
Medtr5g062660 Medicago truncatula
MELO3C005349.2 Cucumis melo
MELO3C012202.2 Cucumis melo
Migut.L01112 Erythranthe guttata
MSTRG.13496 Avicennia marina
MSTRG.7697 Avicennia marina
Nitab4.5_0001178g0080 Nicotiana tabacum
Nitab4.5_0005210g0010 Nicotiana tabacum
Nitab4.5_0013408g0010 Nicotiana tabacum
Nn4g23673 Nelumbo nucifera
Oeu018290.1 Olea europaea
Oeu044394.1 Olea europaea
Peaxi162Scf00118g01310 Petunia axillaris
Peaxi162Scf00367g00519 Petunia axillaris
Peaxi162Scf00367g00520 Petunia axillaris
PGR102G2310 Punica granatum
PGSC0003DMG400030259 Solanum tuberosum
Phvul.003G024900 Phaseolus vulgaris
Potri.008G114300 Populus trichocarpa
Potri.008G114400 Populus trichocarpa
Pp3c20_17780 Physcomitrium patens
PRCOL_00005217 Prasinoderma coloniale
Prupe.1G300800 Prunus persica
Prupe.1G302800 Prunus persica
Prupe.1G302900 Prunus persica
Prupe.1G303000 Prunus persica
Prupe.1G303100 Prunus persica
Prupe.1G303300 Prunus persica
Psat2g074600 Pisum sativum
PSO478G2631 Papaver somniferum
QL03p036408 Quercus lobata
QL03p036461 Quercus lobata
QL03p037189 Quercus lobata
RcHm_v2.0_Chr2g0142051 Rosa chinensis
RcHm_v2.0_Chr2g0142061 Rosa chinensis
RcHm_v2.0_Chr2g0142071 Rosa chinensis
RcHm_v2.0_Chr2g0142081 Rosa chinensis
RcHm_v2.0_Chr2g0142111 Rosa chinensis
RcHm_v2.0_Chr2g0142121 Rosa chinensis
RcHm_v2.0_Chr4g0436151 Rosa chinensis
RcHm_v2.0_Chr4g0436181 Rosa chinensis
RcHm_v2.0_Chr4g0436191 Rosa chinensis
RcHm_v2.0_Chr6g0244161 Rosa chinensis
Sabra08G0086600 Salix brachista
SalBow4G0502 Salvia bowleyana
SalBow8G1203 Salvia bowleyana
SalBow8G2020 Salvia bowleyana
SalBow8G3034 Salvia bowleyana
SalBow8G5193 Salvia bowleyana
Sc04g0006830 Simmondsia chinensis
Sed0004732 Sechium edule
Sed0009817 Sechium edule
SGA_v2.0_scaffold14G06801 Striga asiatica
SGA_v2.0_scaffold14G06802 Striga asiatica
Solyc03g043860.2 Solanum lycopersicum
Solyc03g150121.1 Solanum lycopersicum
Solyc05g010015.1 Solanum lycopersicum
Sopen03g007670 Solanum pennellii
Sopen05g005830 Solanum pennellii
Sp5g23870 Schrenkiella parvula
TAR629G2250 Trochodendron aralioides
THA.LOC104821971 Tarenaya hassleriana
Thecc.02G363400 Theobroma cacao
Thhalv10019297m.g Eutrema salsugineum
TPR.G33571 Trifolium pratense
TWI31G0716 Tripterygium wilfordii
unitig_744.g24286 Utricularia gibba
vmacro10513 Vaccinium macrocarpon

User provided reference genes

Program Settings