Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44390 Brassica napus
A07p06680 Brassica napus
Aa31sc76G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1469 Anthoceros agrestis
Actinidia10792 Actinidia chinensis
Actinidia37025 Actinidia chinensis
Ah.01g001820 Amaranthus hybridus
AL3G42190 Arabidopsis lyrata
Aqoxy1G02861 Aquilegia oxysepala
Aqoxy1G04129 Aquilegia oxysepala
Aqoxy6G01222 Aquilegia oxysepala
Aqoxy6G01617 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0TG0LH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6KAU0S Arachis hypogaea
AT2G04550 Arabidopsis thaliana
ATR1101G050 Amborella trichopoda
Atru.chr6.3279 Acer truncatum
Atru.chr6.3295 Acer truncatum
AUR62015106 Chenopodium quinoa
AUR62017569 Chenopodium quinoa
BcaB06g26820 Brassica carinata
BcaB08g34482 Brassica carinata
BcaC01g03195 Brassica carinata
BcaC06g35879 Brassica carinata
BolC3t17776H Brassica oleracea
BolC7t41460H Brassica oleracea
BraA03t13569Z Brassica rapa
BraA07t28459Z Brassica rapa
C03p55010 Brassica napus
C07p10150 Brassica napus
CAN.G931.5 Capsicum annuum
CANSAT64G2404 Cannabis sativa
CARHR102480 Cardamine hirsuta
CARHR217010 Cardamine hirsuta
Carub.0003s2618 Capsella rubella
Ca_06046_v3 Cicer arietinum L.
CBR_g21813 Chara braunii
CDE04G0112 Ceratophyllum demersum
CDE07G0175 Ceratophyllum demersum
Cfa014297 Carpinus fangiana
Ciclev10016185m.g Citrus clementina
CiPaw.03G274200 Carya illinoinensis
CiPaw.04G192800 Carya illinoinensis
ClCG09G020850 Citrullus lanatus
COL.COLO4_32785 Corchorus olitorius
Cpa.g.sc132.48 Carica papaya
Cre03.g193350 Chlamydomonas reinhardtii
Cre07.g316600 Chlamydomonas reinhardtii
CsaV3_6G037850 Cucumis sativus L.
CSS0002248 Camellia sinensis var. sinensis
CSS0008732 Camellia sinensis var. sinensis
CSS0020066 Camellia sinensis var. sinensis
CSS0046465 Camellia sinensis var. sinensis
DCAR_019737 Daucus carota
Dinv05857 Davidia involucrata
Dinv08705 Davidia involucrata
Duzib133G0743 Durio zibethinus
Duzib138G1090 Durio zibethinus
Duzib211G0639 Durio zibethinus
ECA234G1505 Erigeron canadensis
EL10Ac9g22806 Beta vulgaris
Eucgr.K00729 Eucalyptus grandis
FAN02G2924 Fragaria x ananassa
FAN05G2579 Fragaria x ananassa
FAN09G0399 Fragaria x ananassa
FAN14G2365 Fragaria x ananassa
FvH4_6g41790 Fragaria vesca
Glyma.02G266300 Glycine max
Glyma.14G051200 Glycine max
Gohir.A03G147250 Gossypium hirsutum
Gohir.A07G085000 Gossypium hirsutum
Gohir.A07G188500 Gossypium hirsutum
Gohir.A11G099350 Gossypium hirsutum
Gohir.A11G151900 Gossypium hirsutum
Gohir.D07G090500 Gossypium hirsutum
Gohir.D07G195100 Gossypium hirsutum
Gohir.D11G158900 Gossypium hirsutum
Gorai.001G097000 Gossypium raimondii
Gorai.001G218300 Gossypium raimondii
Gorai.007G169300 Gossypium raimondii
GSVIVG01030535001 Vitis vinifera
HanXRQChr10g0306281 Helianthus annuus
HanXRQChr12g0374401 Helianthus annuus
Haze_12745 Corylus avellana
Hma1.2p1_0133F.1_g060820 Hydrangea macrophylla
Hma1.2p1_0405F.1_g145600 Hydrangea macrophylla
Hund02277 Selenicereus undatus
Hund24189 Selenicereus undatus
Lalb_Chr04g0250221 Lupinus albus
Lalb_Chr10g0105501 Lupinus albus
Lalb_Chr17g0347121 Lupinus albus
Lj1A785T54 Lonicera japonica
Lj1C785T12 Lonicera japonica
LjContig00029g0014825 Lotus japonicus
Lsat_1_v5_gn_5_124900 Lactuca sativa
Manes.12G056500 Manihot esculenta
Manes.13G064900 Manihot esculenta
Mapoly0033s0037 Marchantia polymorpha
MBI19_g29436_MAGBIO Magnolia biondii
MD09G1117100 Malus domestica
MD17G1108600 Malus domestica
Medtr5g084720 Medicago truncatula
MELO3C014446.2 Cucumis melo
Migut.H01256 Erythranthe guttata
MSTRG.14122 Avicennia marina
Nitab4.5_0000130g0020 Nicotiana tabacum
Nitab4.5_0000622g0120 Nicotiana tabacum
Nitab4.5_0008424g0030 Nicotiana tabacum
Nitab4.5_0011973g0010 Nicotiana tabacum
Nn1g03342 Nelumbo nucifera
Nn1g07346 Nelumbo nucifera
Oeu027253.1 Olea europaea
Oeu027254.1 Olea europaea
Oeu036755.1 Olea europaea
Os02g0720300 Oryza sativa ssp. japonica
Os06g0308100 Oryza sativa ssp. japonica
Peaxi162Scf00047g02033 Petunia axillaris
Peaxi162Scf00921g00259 Petunia axillaris
PGR042G3878 Punica granatum
PGR142G1675 Punica granatum
PGSC0003DMG400000662 Solanum tuberosum
PGSC0003DMG400013901 Solanum tuberosum
Phvul.008G215800 Phaseolus vulgaris
Potri.014G160500 Populus trichocarpa
Pp3c15_23940 Physcomitrium patens
Pp3c9_24360 Physcomitrium patens
Prupe.3G206700 Prunus persica
Psat2g027200 Pisum sativum
PSO541G3581 Papaver somniferum
PSO675G0968 Papaver somniferum
QL08p029923 Quercus lobata
RcHm_v2.0_Chr2g0157611 Rosa chinensis
Rhsim04G0046600 Rhododendron simsii
Sabra14G0122200 Salix brachista
SalBow1G6481 Salvia bowleyana
SalBow3G3416 Salvia bowleyana
SalBow7G3654 Salvia bowleyana
Sc06g0009720 Simmondsia chinensis
Sed0019287 Sechium edule
Sed0025216 Sechium edule
SEGI_04616 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18364 Striga asiatica
SMO118G0241 Selaginella moellendorffii
Solyc07g049410.3 Solanum lycopersicum
Solyc12g005990.2 Solanum lycopersicum
Sopen07g024750 Solanum pennellii
Sopen12g001960 Solanum pennellii
Sp3g23330 Schrenkiella parvula
Sp7g10870 Schrenkiella parvula
TAR624G0201 Trochodendron aralioides
TAR627G0092 Trochodendron aralioides
TAR629G1098 Trochodendron aralioides
TAR720G0001 Trochodendron aralioides
THA.LOC104808865 Tarenaya hassleriana
Thecc.01G185000 Theobroma cacao
Thhalv10002646m.g Eutrema salsugineum
Thhalv10005655m.g Eutrema salsugineum
TPR.G17665 Trifolium pratense
TWI18G0815 Tripterygium wilfordii
TWI36G0011 Tripterygium wilfordii
unitig_52.g17329 Utricularia gibba
unitig_62.g23239 Utricularia gibba
vmacro09373 Vaccinium macrocarpon
VMungo0647G2550 Vigna mungo
Zm00001eb252940 Zea mays
Zm00001eb281200 Zea mays

User provided reference genes

Program Settings