Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38550 Brassica napus
A02p10310 Brassica napus
A05p33880 Brassica napus
Aa31LG3G10340 Aethionema arabicum
Aa31LG8G2770 Aethionema arabicum
Actinidia35269 Actinidia chinensis
Ah.06g183670 Amaranthus hybridus
AL3G28110 Arabidopsis lyrata
AL8G29740 Arabidopsis lyrata
Aqoxy4G01310 Aquilegia oxysepala
AT3G15530 Arabidopsis thaliana
AT5G54400 Arabidopsis thaliana
ATR0693G409 Amborella trichopoda
Atru.chr2.2812 Acer truncatum
Atru.chr2.2813 Acer truncatum
AUR62015623 Chenopodium quinoa
AUR62029338 Chenopodium quinoa
BcaB04g20920 Brassica carinata
BcaB05g22132 Brassica carinata
BcaB06g29588 Brassica carinata
BcaC03g14314 Brassica carinata
BcaC05g28964 Brassica carinata
BcaC09g48518 Brassica carinata
BolC1t04855H Brassica oleracea
BolC2t07801H Brassica oleracea
BolC5t33846H Brassica oleracea
BraA01t03905Z Brassica rapa
BraA02t06098Z Brassica rapa
BraA05t22210Z Brassica rapa
C01p48920 Brassica napus
C02p17040 Brassica napus
C05p51590 Brassica napus
CAN.G162.92 Capsicum annuum
CANSAT11G2237 Cannabis sativa
CARHR090590 Cardamine hirsuta
CARHR267680 Cardamine hirsuta
Carub.0003s1526 Capsella rubella
Carub.0008s1473 Capsella rubella
Ca_01814_v3 Cicer arietinum L.
Ca_30536_v3 Cicer arietinum L.
CBR_g24389 Chara braunii
Cc05_g12550 Coffea canephora
Cfa020528 Carpinus fangiana
Ciclev10009067m.g Citrus clementina
CiPaw.11G174600 Carya illinoinensis
CiPaw.12G122100 Carya illinoinensis
ClCG11G018340 Citrullus lanatus
COL.COLO4_09461 Corchorus olitorius
Cpa.g.sc80.101 Carica papaya
Cpa.g.sc80.95 Carica papaya
CsaV3_3G044480 Cucumis sativus L.
CSS0001500 Camellia sinensis var. sinensis
CSS0022309 Camellia sinensis var. sinensis
CSS0025917 Camellia sinensis var. sinensis
CSS0045555 Camellia sinensis var. sinensis
DCAR_009977 Daucus carota
DCAR_022481 Daucus carota
Dinv08329 Davidia involucrata
Dinv22371 Davidia involucrata
Duzib213G0014 Durio zibethinus
Duzib268G0928 Durio zibethinus
ECA236G3281 Erigeron canadensis
ECA246G0789 Erigeron canadensis
EL10Ac4g08091 Beta vulgaris
Eucgr.F01088 Eucalyptus grandis
Eucgr.F03342 Eucalyptus grandis
FAN11G1457 Fragaria x ananassa
FAN16G2997 Fragaria x ananassa
FAN21G3274 Fragaria x ananassa
FAN25G2565 Fragaria x ananassa
FvH4_3g20760 Fragaria vesca
Glyma.06G249400 Glycine max
Glyma.12G148500 Glycine max
Glyma.12G220600 Glycine max
Glyma.13G280900 Glycine max
Gohir.A01G067200 Gossypium hirsutum
Gohir.A04G027700 Gossypium hirsutum
Gohir.D01G054400 Gossypium hirsutum
Gohir.D05G360400 Gossypium hirsutum
Gorai.002G074300 Gossypium raimondii
Gorai.009G432300 Gossypium raimondii
GSVIVG01014410001 Vitis vinifera
HanXRQChr05g0156561 Helianthus annuus
HanXRQChr08g0235651 Helianthus annuus
HanXRQChr08g0235661 Helianthus annuus
HanXRQChr13g0386401 Helianthus annuus
Haze_01531 Corylus avellana
Haze_06332 Corylus avellana
Haze_09505 Corylus avellana
Haze_10444 Corylus avellana
Haze_12044 Corylus avellana
Haze_13283 Corylus avellana
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla
HPP92_016704 Vanilla planifolia
Lalb_Chr01g0016991 Lupinus albus
Lalb_Chr25g0286631 Lupinus albus
Lj1A851T62 Lonicera japonica
Lj3g0025503 Lotus japonicus
Lsat_1_v5_gn_5_7280 Lactuca sativa
Lsat_1_v5_gn_7_105700 Lactuca sativa
Manes.03G114800 Manihot esculenta
Manes.15G084500 Manihot esculenta
Mapoly0019s0089 Marchantia polymorpha
MBI02_g29384_MAGBIO Magnolia biondii
MD03G1221800 Malus domestica
MD11G1239200 Malus domestica
Medtr2g080130 Medicago truncatula
MELO3C018223.2 Cucumis melo
Migut.H01911 Erythranthe guttata
MSTRG.12925 Avicennia marina
MSTRG.14375 Avicennia marina
Nitab4.5_0000815g0050 Nicotiana tabacum
Nitab4.5_0009177g0010 Nicotiana tabacum
Nn1g03957 Nelumbo nucifera
Nn1g06689 Nelumbo nucifera
Oeu008023.1 Olea europaea
Oeu055672.1 Olea europaea
Peaxi162Scf01111g00012 Petunia axillaris
PGR031G2155 Punica granatum
PGSC0003DMG400019253 Solanum tuberosum
Phvul.005G085300 Phaseolus vulgaris
Phvul.011G148200 Phaseolus vulgaris
Potri.001G405200 Populus trichocarpa
Potri.011G128300 Populus trichocarpa
Prupe.4G187700 Prunus persica
Psat4g016400 Pisum sativum
PSO210G3340 Papaver somniferum
PSO832G3402 Papaver somniferum
QL06p019554 Quercus lobata
QL08p019074 Quercus lobata
RcHm_v2.0_Chr5g0034991 Rosa chinensis
Rhsim04G0018800 Rhododendron simsii
Sabra16G0266200 Salix brachista
SalBow7G1458 Salvia bowleyana
Sc16g0006820 Simmondsia chinensis
Sed0000911 Sechium edule
Sed0021920 Sechium edule
SGA_v2.0_scaffold73G24305 Striga asiatica
SGA_v2.0_scaffold9G04950 Striga asiatica
SHI18877 Sapria himalayana
SHI27891 Sapria himalayana
SHI27902 Sapria himalayana
SHI27994 Sapria himalayana
SHI28022 Sapria himalayana
SHI28023 Sapria himalayana
SHI28037 Sapria himalayana
Solyc07g063460.3 Solanum lycopersicum
Sopen07g031640 Solanum pennellii
Sp3g13790 Schrenkiella parvula
Sp6g16410 Schrenkiella parvula
TAR624G0257 Trochodendron aralioides
TAR626G0357 Trochodendron aralioides
THA.LOC104799915 Tarenaya hassleriana
THA.LOC104810491 Tarenaya hassleriana
THA.LOC104818054 Tarenaya hassleriana
Thecc.07G074500 Theobroma cacao
Thhalv10014468m.g Eutrema salsugineum
Thhalv10021257m.g Eutrema salsugineum
TPR.G38955 Trifolium pratense
TWI38G1973 Tripterygium wilfordii
TWI39G0076 Tripterygium wilfordii
unitig_0.g2258 Utricularia gibba
VMungo1080G0833 Vigna mungo
VMungo1127G1925 Vigna mungo
VMungo1127G2040 Vigna mungo

User provided reference genes

Program Settings