Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12670 Brassica napus
A07p27370 Brassica napus
A07p44150 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.1035 Anthoceros agrestis
Actinidia08227 Actinidia chinensis
Actinidia17816 Actinidia chinensis
Actinidia27895 Actinidia chinensis
Ah.01g006270 Amaranthus hybridus
Ah.01g019390 Amaranthus hybridus
AL1G28860 Arabidopsis lyrata
AL2G39470 Arabidopsis lyrata
AL4G14590 Arabidopsis lyrata
Aqoxy2G01125 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.673KA0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z91YIY Arachis hypogaea
AT1G16700 Arabidopsis thaliana
AT1G79010 Arabidopsis thaliana
ATR0733G183 Amborella trichopoda
Atru.chr5.3016 Acer truncatum
AUR62011323 Chenopodium quinoa
AUR62016737 Chenopodium quinoa
BcaB02g07191 Brassica carinata
BcaC08g45392 Brassica carinata
BcaC08g47465 Brassica carinata
BolC5t30212H Brassica oleracea
BolC6t38186H Brassica oleracea
BolC6t40306H Brassica oleracea
BraA07t30378Z Brassica rapa
BraA07t31923Z Brassica rapa
C05p14970 Brassica napus
C06p30230 Brassica napus
C06p52880 Brassica napus
CAN.G1.42 Capsicum annuum
CAN.G1412.6 Capsicum annuum
CANSAT01G0337 Cannabis sativa
CARHR017160 Cardamine hirsuta
CARHR072680 Cardamine hirsuta
Carub.0001s1643 Capsella rubella
Carub.0002s2588 Capsella rubella
Ca_17260_v3 Cicer arietinum L.
Ca_17266_v3 Cicer arietinum L.
Ca_28908_v3 Cicer arietinum L.
CBR_g34677 Chara braunii
Cc02_g25830 Coffea canephora
CDE10G0028 Ceratophyllum demersum
CDE10G0378 Ceratophyllum demersum
Cfa025738 Carpinus fangiana
Ciclev10029226m.g Citrus clementina
CiPaw.05G064500 Carya illinoinensis
ClCG02G005010 Citrullus lanatus
COL.COLO4_25931 Corchorus olitorius
Cpa.g.sc62.151 Carica papaya
Cre12.g496750 Chlamydomonas reinhardtii
CsaV3_7G023570 Cucumis sativus L.
CSS0030568 Camellia sinensis var. sinensis
CSS0043835 Camellia sinensis var. sinensis
DCAR_022973 Daucus carota
Dinv23521 Davidia involucrata
Dinv42064 Davidia involucrata
Duzib052G0763 Durio zibethinus
Duzib132G1254 Durio zibethinus
ECA240G2473 Erigeron canadensis
EL10Ac9g21724 Beta vulgaris
Eucgr.I00724 Eucalyptus grandis
FAN08G1460 Fragaria x ananassa
FAN18G1232 Fragaria x ananassa
FvH4_5g29280 Fragaria vesca
Glyma.05G236100 Glycine max
Glyma.13G241500 Glycine max
Glyma.15G071900 Glycine max
Gohir.A03G194500 Gossypium hirsutum
Gohir.A12G028800 Gossypium hirsutum
Gohir.A13G034300 Gossypium hirsutum
Gohir.D02G215700 Gossypium hirsutum
Gohir.D12G028300 Gossypium hirsutum
Gohir.D13G032700 Gossypium hirsutum
Gorai.005G243700 Gossypium raimondii
Gorai.008G028900 Gossypium raimondii
Gorai.013G037100 Gossypium raimondii
GSVIVG01031966001 Vitis vinifera
HanXRQChr05g0152721 Helianthus annuus
HanXRQChr15g0486481 Helianthus annuus
HanXRQChr16g0505671 Helianthus annuus
Haze_02384 Corylus avellana
Haze_27004 Corylus avellana
Hma1.2p1_0066F.1_g036410 Hydrangea macrophylla
HPP92_001858 Vanilla planifolia
HPP92_001874 Vanilla planifolia
Hund00270 Selenicereus undatus
Hund06234 Selenicereus undatus
Lalb_Chr09g0330921 Lupinus albus
Lalb_Chr16g0387561 Lupinus albus
Lj2g0008973 Lotus japonicus
Lj2g0023328 Lotus japonicus
Lj5A197T63 Lonicera japonica
Lsat_1_v5_gn_3_134741 Lactuca sativa
Lsat_1_v5_gn_5_118541 Lactuca sativa
Lsat_1_v5_gn_7_89240 Lactuca sativa
Lsat_1_v5_gn_9_108541 Lactuca sativa
Manes.15G163400 Manihot esculenta
Manes.17G101100 Manihot esculenta
Mapoly0008s0062 Marchantia polymorpha
MBI16_g28725_MAGBIO Magnolia biondii
MCO04G399 Micromonas commoda
MD05G1066300 Malus domestica
MD10G1076300 Malus domestica
Medtr8g010570 Medicago truncatula
MELO3C012522.2 Cucumis melo
Migut.N01239 Erythranthe guttata
MSTRG.5398 Avicennia marina
Nitab4.5_0000308g0130 Nicotiana tabacum
Nitab4.5_0001361g0250 Nicotiana tabacum
Nitab4.5_0004172g0100 Nicotiana tabacum
Nitab4.5_0005152g0090 Nicotiana tabacum
Nn5g29610 Nelumbo nucifera
Oeu055570.1 Olea europaea
Os03g0774200 Oryza sativa ssp. japonica
Peaxi162Scf00016g00727 Petunia axillaris
PGR042G2304 Punica granatum
PGSC0003DMG400000726 Solanum tuberosum
PGSC0003DMG400033912 Solanum tuberosum
Phvul.006G187900 Phaseolus vulgaris
Potri.004G154900 Populus trichocarpa
Potri.009G116000 Populus trichocarpa
Pp3c15_4330 Physcomitrium patens
Pp3c9_8460 Physcomitrium patens
PRCOL_00001402 Prasinoderma coloniale
Prupe.8G096900 Prunus persica
Psat4g207360 Pisum sativum
PSO541G5084 Papaver somniferum
PSO675G8903 Papaver somniferum
QL11p043693 Quercus lobata
RcHm_v2.0_Chr7g0222141 Rosa chinensis
Rhsim11G0177100 Rhododendron simsii
SalBow6G3946 Salvia bowleyana
SalBow6G5126 Salvia bowleyana
Sc08g0000500 Simmondsia chinensis
Sc18g0004460 Simmondsia chinensis
Sed0011539 Sechium edule
SEGI_37571 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13166 Striga asiatica
SGA_v2.0_scaffold58G20535 Striga asiatica
SMO228G0074 Selaginella moellendorffii
Solyc01g109620.3 Solanum lycopersicum
Solyc10g051350.2 Solanum lycopersicum
Sopen01g051810 Solanum pennellii
Sopen10g023040 Solanum pennellii
Sp1g14840 Schrenkiella parvula
Sp5g34060 Schrenkiella parvula
TAR376G0081 Trochodendron aralioides
TAR625G0183 Trochodendron aralioides
TAR628G0274 Trochodendron aralioides
THA.LOC104804724 Tarenaya hassleriana
THA.LOC104815454 Tarenaya hassleriana
Thecc.02G085200 Theobroma cacao
Thhalv10008714m.g Eutrema salsugineum
Thhalv10017872m.g Eutrema salsugineum
Thhalv10019110m.g Eutrema salsugineum
TPR.G9766 Trifolium pratense
TWI31G1137 Tripterygium wilfordii
TWI75G0915 Tripterygium wilfordii
unitig_22.g5173 Utricularia gibba
vmacro02107 Vaccinium macrocarpon
VMungo0540G2365 Vigna mungo
Zm00001eb059090 Zea mays
Zm00001eb213750 Zea mays

User provided reference genes

Program Settings