Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22660 Brassica napus
Aa31LG4G1820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3209 Anthoceros agrestis
Actinidia07374 Actinidia chinensis
Actinidia07375 Actinidia chinensis
Actinidia07381 Actinidia chinensis
Actinidia07382 Actinidia chinensis
Actinidia09631 Actinidia chinensis
Actinidia12771 Actinidia chinensis
Ah.02g131470 Amaranthus hybridus
AL2G39660 Arabidopsis lyrata
Aqoxy7G03893 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea
AT1G79190 Arabidopsis thaliana
ATR0763G037 Amborella trichopoda
Atru.chr1.126 Acer truncatum
AUR62006227 Chenopodium quinoa
AUR62036983 Chenopodium quinoa
BcaB02g08672 Brassica carinata
BcaB05g25178 Brassica carinata
BcaC03g15873 Brassica carinata
BolC2t09641H Brassica oleracea
BraA02t07267Z Brassica rapa
C02p36270 Brassica napus
CANSAT80G1893 Cannabis sativa
CARHR072830 Cardamine hirsuta
CARHR072840 Cardamine hirsuta
Carub.0002s2605 Capsella rubella
Carub.0002s2606 Capsella rubella
Ca_12380_v3 Cicer arietinum L.
Ca_12388_v3 Cicer arietinum L.
CBR_g39747 Chara braunii
CBR_g39748 Chara braunii
Cc00_g15170 Coffea canephora
Cc03_g14950 Coffea canephora
Cc05_g16300 Coffea canephora
CDE05G2591 Ceratophyllum demersum
Cfa021688 Carpinus fangiana
Ciclev10007189m.g Citrus clementina
CiPaw.11G062700 Carya illinoinensis
ClCG09G022670 Citrullus lanatus
COL.COLO4_05147 Corchorus olitorius
Cpa.g.sc34.11 Carica papaya
Cpa.g.sc34.4 Carica papaya
Cpa.g.sc34.5 Carica papaya
Cpa.g.sc34.6 Carica papaya
Cre01.g039600 Chlamydomonas reinhardtii
CsaV3_7G022870 Cucumis sativus L.
CSS0042003 Camellia sinensis var. sinensis
DCAR_019921 Daucus carota
Dinv19596 Davidia involucrata
ECA240G2290 Erigeron canadensis
EL10Ac2g03265 Beta vulgaris
EL10Ac9g22400 Beta vulgaris
Eucgr.F04450 Eucalyptus grandis
FAN11G0660 Fragaria x ananassa
FAN16G3091 Fragaria x ananassa
FAN21G0666 Fragaria x ananassa
FvH4_3g15310 Fragaria vesca
Glyma.09G284900 Glycine max
Gohir.A08G232300 Gossypium hirsutum
Gohir.D08G252532 Gossypium hirsutum
Gorai.004G269300 Gossypium raimondii
GSVIVG01036797001 Vitis vinifera
HanXRQChr03g0078241 Helianthus annuus
Haze_07823 Corylus avellana
Haze_07825 Corylus avellana
Hma1.2p1_1054F.1_g252470 Hydrangea macrophylla
HPP92_021082 Vanilla planifolia
Lalb_Chr18g0046601 Lupinus albus
Lj2A15G78 Lonicera japonica
Lj2g0013005 Lotus japonicus
Lsat_1_v5_gn_7_70840 Lactuca sativa
Manes.03G176500 Manihot esculenta
Mapoly0151s0022 Marchantia polymorpha
MBI02_g15959_MAGBIO Magnolia biondii
MCO13G561 Micromonas commoda
MD05G1224200 Malus domestica
MD05G1224300 Malus domestica
MD10G1205500 Malus domestica
MD10G1205600 Malus domestica
MD10G1205700 Malus domestica
MD10G1205800 Malus domestica
Medtr1g038850 Medicago truncatula
MELO3C008303.2 Cucumis melo
MELO3C012612.2 Cucumis melo
MELO3C025974.2 Cucumis melo
MELO3C027882.2 Cucumis melo
MELO3C028433.2 Cucumis melo
MELO3C029569.2 Cucumis melo
MELO3C030784.2 Cucumis melo
Migut.H01674 Erythranthe guttata
MSTRG.12674 Avicennia marina
Nitab4.5_0000388g0130 Nicotiana tabacum
Nitab4.5_0009962g0010 Nicotiana tabacum
Nitab4.5_0009962g0020 Nicotiana tabacum
Nn3g21002 Nelumbo nucifera
Oeu019710.1 Olea europaea
Os10g0575800 Oryza sativa ssp. japonica
Peaxi162Scf00006g01510 Petunia axillaris
Peaxi162Scf00078g01336 Petunia axillaris
PGR031G1415 Punica granatum
Phvul.003G002100 Phaseolus vulgaris
Potri.007G067700 Populus trichocarpa
Pp3c22_19900 Physcomitrium patens
PRCOL_00003205 Prasinoderma coloniale
Prupe.4G136200 Prunus persica
Psat6g100160 Pisum sativum
PSO210G0403 Papaver somniferum
PSO210G1337 Papaver somniferum
PSO478G2881 Papaver somniferum
QL04p080502 Quercus lobata
QL12p004433 Quercus lobata
QL12p004446 Quercus lobata
RcHm_v2.0_Chr5g0025751 Rosa chinensis
Rhsim06G0241600 Rhododendron simsii
Sabra07G0053700 Salix brachista
SalBow7G4120 Salvia bowleyana
Sc06g0002790 Simmondsia chinensis
Sc07g0006880 Simmondsia chinensis
Sed0006880 Sechium edule
SEGI_00999 Sequoiadendron giganteum
SEGI_06167 Sequoiadendron giganteum
SEGI_07420 Sequoiadendron giganteum
SEGI_16544 Sequoiadendron giganteum
SEGI_27653 Sequoiadendron giganteum
SEGI_33780 Sequoiadendron giganteum
SGA_v2.0_scaffold239G44031 Striga asiatica
SHI21613 Sapria himalayana
SHI21614 Sapria himalayana
SHI21617 Sapria himalayana
SHI21618 Sapria himalayana
SHI21619 Sapria himalayana
Solyc12g017280.2 Solanum lycopersicum
Sopen12g008100 Solanum pennellii
Sopen12g008110 Solanum pennellii
Sp5g34240 Schrenkiella parvula
TAR624G0115 Trochodendron aralioides
TAR626G0647 Trochodendron aralioides
TAR626G1109 Trochodendron aralioides
THA.LOC104812364 Tarenaya hassleriana
Thecc.07G167700 Theobroma cacao
Thecc.07G167800 Theobroma cacao
Thecc.08G194100 Theobroma cacao
Thhalv10018016m.g Eutrema salsugineum
TPR.G17466 Trifolium pratense
TPR.G236 Trifolium pratense
TPR.G28108 Trifolium pratense
TPR.G34228 Trifolium pratense
TPR.G35532 Trifolium pratense
TPR.G40005 Trifolium pratense
TWI38G1370 Tripterygium wilfordii
unitig_8.g4753 Utricularia gibba
vmacro11705 Vaccinium macrocarpon
VMungo0251G3136 Vigna mungo
Zm00001eb060300 Zea mays
Zm00001eb086610 Zea mays
Zm00001eb086620 Zea mays
Zm00001eb146320 Zea mays
Zm00001eb224850 Zea mays
Zm00001eb269250 Zea mays
Zm00001eb307980 Zea mays
Zm00001eb307990 Zea mays
Zm00001eb309820 Zea mays
Zm00001eb372650 Zea mays

User provided reference genes

Program Settings