Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p15980 Brassica napus
Aa31LG11G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3513 Anthoceros agrestis
Actinidia23822 Actinidia chinensis
Actinidia34514 Actinidia chinensis
Ah.01g002020 Amaranthus hybridus
AL8G34340 Arabidopsis lyrata
Aqoxy2G00658 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1VUI6H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P847CR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.URW4K1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VY09I5 Arachis hypogaea
AT5G58240 Arabidopsis thaliana
ATR0620G116 Amborella trichopoda
ATR0743G223 Amborella trichopoda
Atru.chr1.1108 Acer truncatum
Atru.chr1.1109 Acer truncatum
AUR62015168 Chenopodium quinoa
AUR62017620 Chenopodium quinoa
BcaB01g04543 Brassica carinata
BcaC04g19900 Brassica carinata
BolC9t57861H Brassica oleracea
BraA10t43627Z Brassica rapa
C09p50090 Brassica napus
CAN.G3.27 Capsicum annuum
CANSAT54G0105 Cannabis sativa
CANSAT54G0115 Cannabis sativa
CARHR272040 Cardamine hirsuta
Carub.0008s1878 Capsella rubella
Ca_15091_v3 Cicer arietinum L.
CBR_g39157 Chara braunii
Cc01_g15600 Coffea canephora
CDE08G1045 Ceratophyllum demersum
CDE08G1523 Ceratophyllum demersum
Ciclev10005970m.g Citrus clementina
Ciclev10006524m.g Citrus clementina
Ciclev10006852m.g Citrus clementina
CiPaw.13G059500 Carya illinoinensis
CiPaw.14G047000 Carya illinoinensis
ClCG00G000300 Citrullus lanatus
ClCG00G001760 Citrullus lanatus
ClCG10G000760 Citrullus lanatus
ClCG10G003560 Citrullus lanatus
COL.COLO4_34964 Corchorus olitorius
Cpa.g.sc84.38 Carica papaya
Cre17.g698266 Chlamydomonas reinhardtii
CsaV3_3G000810 Cucumis sativus L.
CSS0003603 Camellia sinensis var. sinensis
CSS0034718 Camellia sinensis var. sinensis
CSS0035716 Camellia sinensis var. sinensis
Dinv28765 Davidia involucrata
Dinv28766 Davidia involucrata
Duzib168G2323 Durio zibethinus
ECA236G4332 Erigeron canadensis
ECA247G3741 Erigeron canadensis
EL10Ac9g22874 Beta vulgaris
Eucgr.D01049 Eucalyptus grandis
Eucgr.D01050 Eucalyptus grandis
FAN11G1599 Fragaria x ananassa
FAN12G2850 Fragaria x ananassa
FAN16G2313 Fragaria x ananassa
FAN21G2911 Fragaria x ananassa
FvH4_3g41190 Fragaria vesca
FvH4_3g41230 Fragaria vesca
FvH4_4g07220 Fragaria vesca
Glyma.11G201800 Glycine max
Glyma.18G049000 Glycine max
Glyma.18G049100 Glycine max
Gohir.A10G118575 Gossypium hirsutum
Gohir.D10G148100 Gossypium hirsutum
Gorai.011G165300 Gossypium raimondii
GSVIVG01024520001 Vitis vinifera
HanXRQChr08g0231121 Helianthus annuus
HanXRQChr08g0231131 Helianthus annuus
HanXRQChr13g0391791 Helianthus annuus
Haze_24498 Corylus avellana
Hma1.2p1_0161F.1_g071960 Hydrangea macrophylla
HPP92_015443 Vanilla planifolia
HPP92_015444 Vanilla planifolia
Hund24328 Selenicereus undatus
Hund24406 Selenicereus undatus
Lalb_Chr15g0085541 Lupinus albus
Lalb_Chr15g0085561 Lupinus albus
Lj2C1107G8 Lonicera japonica
Lj6g0019258 Lotus japonicus
Lj6g0024729 Lotus japonicus
Lsat_1_v5_gn_1_8900 Lactuca sativa
Lsat_1_v5_gn_8_98760 Lactuca sativa
Lsat_1_v5_gn_9_15480 Lactuca sativa
Manes.02G210080 Manihot esculenta
Mapoly0107s0014 Marchantia polymorpha
MBI03_g31633_MAGBIO Magnolia biondii
MBI03_g31635_MAGBIO Magnolia biondii
MBI03_g31636_MAGBIO Magnolia biondii
MCO06G292 Micromonas commoda
MD03G1046300 Malus domestica
MD03G1046400 Malus domestica
MD11G1049100 Malus domestica
Medtr3g062940 Medicago truncatula
Medtr3g062950 Medicago truncatula
Medtr3g063030 Medicago truncatula
MELO3C013768.2 Cucumis melo
MELO3C014026.2 Cucumis melo
Migut.N00703 Erythranthe guttata
MSTRG.12721 Avicennia marina
MSTRG.18523 Avicennia marina
MSTRG.21280 Avicennia marina
Nitab4.5_0000539g0100 Nicotiana tabacum
Nitab4.5_0002399g0100 Nicotiana tabacum
Nn4g26698 Nelumbo nucifera
Oeu020453.2 Olea europaea
Oeu023904.1 Olea europaea
Os09g0246250 Oryza sativa ssp. japonica
Os11g0120600 Oryza sativa ssp. japonica
Os11g0120725 Oryza sativa ssp. japonica
Os12g0120400 Oryza sativa ssp. japonica
Peaxi162Scf00293g00719 Petunia axillaris
PGR083G2809 Punica granatum
PGSC0003DMG400015127 Solanum tuberosum
Phvul.006G082500 Phaseolus vulgaris
Potri.013G161100 Populus trichocarpa
Potri.019G133101 Populus trichocarpa
Potri.019G133200 Populus trichocarpa
Pp3c4_3210 Physcomitrium patens
PRCOL_00000589 Prasinoderma coloniale
Prupe.6G037600 Prunus persica
Psat5g146320 Pisum sativum
Psat5g146360 Pisum sativum
PSO339G1462 Papaver somniferum
PSO339G1940 Papaver somniferum
PSO384G1823 Papaver somniferum
QL01p023459 Quercus lobata
QL01p023462 Quercus lobata
RcHm_v2.0_Chr1g0353171 Rosa chinensis
RcHm_v2.0_Chr2g0136141 Rosa chinensis
RcHm_v2.0_Chr4g0393461 Rosa chinensis
RcHm_v2.0_Chr5g0074021 Rosa chinensis
RcHm_v2.0_Chr5g0074031 Rosa chinensis
RcHm_v2.0_Chr5g0074041 Rosa chinensis
Rhsim01G0245500 Rhododendron simsii
Sabra19G0129300 Salix brachista
Sabra19G0129400 Salix brachista
SalBow2G3254 Salvia bowleyana
Sc04g0008110 Simmondsia chinensis
Sc14g0008130 Simmondsia chinensis
Sed0009740 Sechium edule
Sed0016747 Sechium edule
Sed0025842 Sechium edule
SEGI_00344 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04481 Striga asiatica
SMO163G0095 Selaginella moellendorffii
SMO351G0049 Selaginella moellendorffii
Solyc09g018630.3 Solanum lycopersicum
Solyc09g018650.3 Solanum lycopersicum
Sp6g19900 Schrenkiella parvula
TAR633G0792 Trochodendron aralioides
THA.LOC104823773 Tarenaya hassleriana
Thecc.09G366500 Theobroma cacao
Thhalv10014808m.g Eutrema salsugineum
TPR.G13822 Trifolium pratense
TPR.G37420 Trifolium pratense
TWI32G0546 Tripterygium wilfordii
unitig_26.g10228 Utricularia gibba
vmacro14660 Vaccinium macrocarpon
VMungo0540G0713 Vigna mungo
Zm00001eb265500 Zea mays

User provided reference genes

Program Settings