Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28640 Brassica napus
A05p08460 Brassica napus
Aa31LG5G19670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis
Actinidia05298 Actinidia chinensis
Actinidia13127 Actinidia chinensis
Actinidia13128 Actinidia chinensis
AL4G33990 Arabidopsis lyrata
Aqoxy2G02034 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea
AT2G37500 Arabidopsis thaliana
ATR0559G147 Amborella trichopoda
Atru.chr8.1955 Acer truncatum
AUR62004247 Chenopodium quinoa
AUR62031166 Chenopodium quinoa
AUR62035732 Chenopodium quinoa
AUR62036580 Chenopodium quinoa
BcaB02g09282 Brassica carinata
BcaB06g28999 Brassica carinata
BcaB08g34435 Brassica carinata
BcaB08g35223 Brassica carinata
BcaC01g04800 Brassica carinata
BcaC02g11857 Brassica carinata
BcaC04g20716 Brassica carinata
BcaC05g28037 Brassica carinata
BcaC06g34343 Brassica carinata
BcaC07g37609 Brassica carinata
BcaC07g37638 Brassica carinata
BolC4t22646H Brassica oleracea
BolC4t28100H Brassica oleracea
BolC5t30237H Brassica oleracea
BolC5t33363H Brassica oleracea
BolC5t33714H Brassica oleracea
BolC6t36588H Brassica oleracea
BraA04t18341Z Brassica rapa
BraA05t19815Z Brassica rapa
C01p38510 Brassica napus
C02p38620 Brassica napus
C02p59220 Brassica napus
C04p10550 Brassica napus
C04p14230 Brassica napus
C04p65960 Brassica napus
C05p40550 Brassica napus
C05p46330 Brassica napus
C06p14100 Brassica napus
C07p30140 Brassica napus
CAN.G1327.6 Capsicum annuum
CAN.G97.19 Capsicum annuum
CANSAT56G4185 Cannabis sativa
CARHR132110 Cardamine hirsuta
CARHR249580 Cardamine hirsuta
Carub.0004s1942 Capsella rubella
Ca_09614_v3 Cicer arietinum L.
CBR_g37471 Chara braunii
Cc02_g24250 Coffea canephora
Cc06_g02960 Coffea canephora
CDE05G0081 Ceratophyllum demersum
Cfa017427 Carpinus fangiana
Cfa017428 Carpinus fangiana
Cfa024613 Carpinus fangiana
Ciclev10011653m.g Citrus clementina
CiPaw.09G188900 Carya illinoinensis
ClCG10G020940 Citrullus lanatus
Cpa.g.sc11.168 Carica papaya
Cre16.g694850 Chlamydomonas reinhardtii
CsaV3_3G035070 Cucumis sativus L.
CSS0004421 Camellia sinensis var. sinensis
DCAR_009253 Daucus carota
Dinv35635 Davidia involucrata
Dinv37204 Davidia involucrata
Duzib128G0641 Durio zibethinus
ECA238G4253 Erigeron canadensis
EL10Ac7g17097 Beta vulgaris
EL10Ac8g18739 Beta vulgaris
EL10Ac8g18791 Beta vulgaris
Eucgr.K03158 Eucalyptus grandis
FAN02G4217 Fragaria x ananassa
FAN14G0717 Fragaria x ananassa
FvH4_6g14300 Fragaria vesca
Glyma.10G044300 Glycine max
Glyma.13G131900 Glycine max
Glyma.18G131800 Glycine max
Gohir.A09G158200 Gossypium hirsutum
Gohir.D09G153600 Gossypium hirsutum
Gorai.006G175100 Gossypium raimondii
GSVIVG01025529001 Vitis vinifera
HanXRQChr14g0453741 Helianthus annuus
Haze_20743 Corylus avellana
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla
HPP92_001489 Vanilla planifolia
Hund02377 Selenicereus undatus
Lalb_Chr06g0171031 Lupinus albus
Lj2C99G10 Lonicera japonica
Lj5g0017615 Lotus japonicus
Lsat_1_v5_gn_2_110500 Lactuca sativa
Lsat_1_v5_gn_4_171201 Lactuca sativa
Lsat_1_v5_gn_6_110780 Lactuca sativa
Lsat_1_v5_gn_7_15681 Lactuca sativa
Lsat_1_v5_gn_7_20760 Lactuca sativa
Manes.09G086800 Manihot esculenta
Mapoly0082s0028 Marchantia polymorpha
MBI14_g24308_MAGBIO Magnolia biondii
MCO14G482 Micromonas commoda
MD04G1121900 Malus domestica
MD12G1138500 Malus domestica
Medtr1g068845 Medicago truncatula
MELO3C009277.2 Cucumis melo
Migut.J00361 Erythranthe guttata
MSTRG.19100 Avicennia marina
Nitab4.5_0002077g0090 Nicotiana tabacum
Nitab4.5_0009149g0030 Nicotiana tabacum
Nn2g10437 Nelumbo nucifera
Oeu036175.1 Olea europaea
Os03g0279400 Oryza sativa ssp. japonica
Peaxi162Scf00039g01234 Petunia axillaris
PGR044G1633 Punica granatum
PGSC0003DMG400008852 Solanum tuberosum
Phvul.007G158000 Phaseolus vulgaris
Potri.012G115900 Populus trichocarpa
Potri.015G112400 Populus trichocarpa
Pp3c9_2270 Physcomitrium patens
PRCOL_00001324 Prasinoderma coloniale
Prupe.6G250400 Prunus persica
Psat6g067760 Pisum sativum
PSO206G0015 Papaver somniferum
PSO339G5566 Papaver somniferum
QL05p010548 Quercus lobata
QL07p047335 Quercus lobata
QL09p012946 Quercus lobata
QL09p013305 Quercus lobata
RcHm_v2.0_Chr3g0467271 Rosa chinensis
Rhsim04G0153900 Rhododendron simsii
Sabra12G0084000 Salix brachista
Sabra15G0134100 Salix brachista
SalBow3G0454 Salvia bowleyana
SalBow6G0271 Salvia bowleyana
Sc20g0004610 Simmondsia chinensis
Sed0027746 Sechium edule
SEGI_12229 Sequoiadendron giganteum
SEGI_16124 Sequoiadendron giganteum
SEGI_30751 Sequoiadendron giganteum
SEGI_32622 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24934 Striga asiatica
SHI29092 Sapria himalayana
SMO347G0094 Selaginella moellendorffii
Solyc09g010420.4 Solanum lycopersicum
Sopen09g005160 Solanum pennellii
Sp4g19820 Schrenkiella parvula
TAR369G0704 Trochodendron aralioides
TAR623G0301 Trochodendron aralioides
TAR623G0331 Trochodendron aralioides
THA.LOC104815237 Tarenaya hassleriana
Thecc.05G044300 Theobroma cacao
Thhalv10016608m.g Eutrema salsugineum
TPR.G11806 Trifolium pratense
TWI74G1158 Tripterygium wilfordii
unitig_578.g15701 Utricularia gibba
vmacro08669 Vaccinium macrocarpon
VMungo0720G1280 Vigna mungo
VMungo0720G1352 Vigna mungo
Zm00001eb012670 Zea mays

User provided reference genes

Program Settings