Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05350 Brassica napus
A03p61690 Brassica napus
Aa31LG2G6480 Aethionema arabicum
Aa31sc248G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis
Actinidia14699 Actinidia chinensis
Actinidia18200 Actinidia chinensis
AL7G18760 Arabidopsis lyrata
Aqoxy408s001 Aquilegia oxysepala
Aqoxy7G03867 Aquilegia oxysepala
Aqoxy7G03891 Aquilegia oxysepala
Aqoxy7G03943 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea
AT4G32930 Arabidopsis thaliana
ATR0789G016 Amborella trichopoda
Atru.chr2.3707 Acer truncatum
Atru.chr7.2026 Acer truncatum
AUR62002213 Chenopodium quinoa
AUR62007889 Chenopodium quinoa
AUR62009204 Chenopodium quinoa
AUR62010512 Chenopodium quinoa
AUR62018016 Chenopodium quinoa
AUR62022800 Chenopodium quinoa
AUR62023968 Chenopodium quinoa
AUR62034857 Chenopodium quinoa
AUR62035772 Chenopodium quinoa
AUR62038391 Chenopodium quinoa
AUR62040201 Chenopodium quinoa
AUR62043052 Chenopodium quinoa
AUR62044607 Chenopodium quinoa
BcaB04g19156 Brassica carinata
BcaC07g42315 Brassica carinata
BcaC09g52093 Brassica carinata
BcaNung02146 Brassica carinata
BolC1t00557H Brassica oleracea
BraA01t00509Z Brassica rapa
BraA03t15208Z Brassica rapa
C01p05770 Brassica napus
C07p59420 Brassica napus
CAN.G309.57 Capsicum annuum
CANSAT01G0851 Cannabis sativa
CANSAT01G1320 Cannabis sativa
CARHR240940 Cardamine hirsuta
Carub.0007s0755 Capsella rubella
Ca_13187_v3 Cicer arietinum L.
CBR_g18691 Chara braunii
Cc08_g10140 Coffea canephora
CDE07G0102 Ceratophyllum demersum
CDE07G1388 Ceratophyllum demersum
Cfa017926 Carpinus fangiana
Cfa025610 Carpinus fangiana
Ciclev10009729m.g Citrus clementina
CiPaw.15G042300 Carya illinoinensis
ClCG08G016900 Citrullus lanatus
COL.COLO4_21022 Corchorus olitorius
COL.COLO4_30599 Corchorus olitorius
Cpa.g.sc78.12 Carica papaya
Cre09.g395800 Chlamydomonas reinhardtii
CsaV3_2G025720 Cucumis sativus L.
CSS0026627 Camellia sinensis var. sinensis
CSS0030161 Camellia sinensis var. sinensis
DCAR_000778 Daucus carota
DCAR_004448 Daucus carota
DCAR_004449 Daucus carota
Dinv27959 Davidia involucrata
Duzib168G1102 Durio zibethinus
Duzib187G0506 Durio zibethinus
ECA246G5265 Erigeron canadensis
EL10Ac2g03945 Beta vulgaris
Eucgr.C00632 Eucalyptus grandis
FAN15G2319 Fragaria x ananassa
FAN15G3082 Fragaria x ananassa
FAN15G3631 Fragaria x ananassa
FAN20G1958 Fragaria x ananassa
FAN24G0417 Fragaria x ananassa
FAN24G1314 Fragaria x ananassa
FAN27G1738 Fragaria x ananassa
FvH4_2g32260 Fragaria vesca
FvH4_2g32280 Fragaria vesca
Glyma.14G092300 Glycine max
Glyma.17G231200 Glycine max
Gohir.A05G044300 Gossypium hirsutum
Gohir.A06G090500 Gossypium hirsutum
Gohir.D05G045900 Gossypium hirsutum
Gohir.D06G089500 Gossypium hirsutum
Gorai.009G047300 Gossypium raimondii
Gorai.010G103400 Gossypium raimondii
GSVIVG01016838001 Vitis vinifera
GSVIVG01016840001 Vitis vinifera
GSVIVG01022475001 Vitis vinifera
GSVIVG01035339001 Vitis vinifera
HanXRQChr17g0539351 Helianthus annuus
Haze_18224 Corylus avellana
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla
HPP92_004580 Vanilla planifolia
Hund03363 Selenicereus undatus
Hund19479 Selenicereus undatus
Lalb_Chr14g0367901 Lupinus albus
Lj5g0002830 Lotus japonicus
Lj8A557T6 Lonicera japonica
Lsat_1_v5_gn_3_28241 Lactuca sativa
Lsat_1_v5_gn_5_67680 Lactuca sativa
Manes.03G046100 Manihot esculenta
Mapoly0044s0101 Marchantia polymorpha
MBI04_g12184_MAGBIO Magnolia biondii
MCO11G136 Micromonas commoda
MD08G1073900 Malus domestica
Medtr1g016900 Medicago truncatula
MELO3C010766.2 Cucumis melo
Migut.A00159 Erythranthe guttata
MSTRG.1674 Avicennia marina
Nitab4.5_0001927g0060 Nicotiana tabacum
Nitab4.5_0001927g0070 Nicotiana tabacum
Nitab4.5_0021628g0010 Nicotiana tabacum
Nn6g35383 Nelumbo nucifera
Nn8g38967 Nelumbo nucifera
Oeu036354.1 Olea europaea
Oeu057699.1 Olea europaea
Os01g0565600 Oryza sativa ssp. japonica
Peaxi162Scf00247g00612 Petunia axillaris
Peaxi162Scf00545g00001 Petunia axillaris
Peaxi162Scf00545g00002 Petunia axillaris
PGR031G1882 Punica granatum
PGSC0003DMG400025516 Solanum tuberosum
Phvul.001G033101 Phaseolus vulgaris
Potri.006G233500 Populus trichocarpa
Pp3c27_2440 Physcomitrium patens
Pp3c5_10040 Physcomitrium patens
Prupe.1G415500 Prunus persica
Psat6g019000 Pisum sativum
PSO210G4696 Papaver somniferum
PSO210G6502 Papaver somniferum
QL02p001694 Quercus lobata
RcHm_v2.0_Chr6g0310421 Rosa chinensis
RcHm_v2.0_Chr6g0310431 Rosa chinensis
Rhsim01G0086000 Rhododendron simsii
Rhsim07G0144100 Rhododendron simsii
Sabra06G0181900 Salix brachista
SalBow4G2144 Salvia bowleyana
Sc06g0000890 Simmondsia chinensis
Sc09g0009630 Simmondsia chinensis
Sed0007787 Sechium edule
SEGI_14756 Sequoiadendron giganteum
SGA_v2.0_scaffold88G27217 Striga asiatica
SMO117G0066 Selaginella moellendorffii
Solyc11g070050.2 Solanum lycopersicum
Solyc11g070060.2 Solanum lycopersicum
Sopen11g028730 Solanum pennellii
Sopen11g028740 Solanum pennellii
Sp7g30710 Schrenkiella parvula
TAR624G0139 Trochodendron aralioides
TAR636G0904 Trochodendron aralioides
THA.LOC104803799 Tarenaya hassleriana
Thecc.06G107200 Theobroma cacao
Thecc.09G050400 Theobroma cacao
Thhalv10025837m.g Eutrema salsugineum
TPR.G12986 Trifolium pratense
TWI34G0953 Tripterygium wilfordii
unitig_578.g16576 Utricularia gibba
vmacro05276 Vaccinium macrocarpon
VMungo0647G2384 Vigna mungo
Zm00001eb159830 Zea mays
Zm00001eb356880 Zea mays

User provided reference genes

Program Settings