Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18210 Brassica napus
Aa31LG5G4720 Aethionema arabicum
Aa31LG5G8100 Aethionema arabicum
Ah.01g003110 Amaranthus hybridus
Ah.08g211800 Amaranthus hybridus
AL4G22170 Arabidopsis lyrata
AL4G28030 Arabidopsis lyrata
Aqoxy1G01172 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RBUQ0I Arachis hypogaea
AT2G28050 Arabidopsis thaliana
AT2G32630 Arabidopsis thaliana
ATR1136G126 Amborella trichopoda
Atru.chr12.311 Acer truncatum
Atru.chr12.340 Acer truncatum
Atru.chr13.2607 Acer truncatum
Atru.chr8.1831 Acer truncatum
Atru.chr8.977 Acer truncatum
AUR62022768 Chenopodium quinoa
AUR62029220 Chenopodium quinoa
AUR62040455 Chenopodium quinoa
AUR62041993 Chenopodium quinoa
BcaB01g03971 Brassica carinata
BcaB02g10133 Brassica carinata
BcaC01g05901 Brassica carinata
BcaC02g10932 Brassica carinata
BolC3t14507H Brassica oleracea
BolC4t23855H Brassica oleracea
BraA03t11081Z Brassica rapa
BraA07t29569Z Brassica rapa
C03p21260 Brassica napus
C04p23520 Brassica napus
CAN.G1169.8 Capsicum annuum
CANSAT11G1641 Cannabis sativa
CANSAT21G1589 Cannabis sativa
CANSAT54G2410 Cannabis sativa
CANSAT80G1593 Cannabis sativa
CARHR004520 Cardamine hirsuta
CARHR120730 Cardamine hirsuta
CARHR126490 Cardamine hirsuta
Carub.0004s0880 Capsella rubella
Carub.0004s1396 Capsella rubella
Ca_11878_v3 Cicer arietinum L.
Cc01_g10670 Coffea canephora
Cc06_g04130 Coffea canephora
CDE02G3824 Ceratophyllum demersum
Cfa011366 Carpinus fangiana
Cfa017586 Carpinus fangiana
Ciclev10011284m.g Citrus clementina
CiPaw.09G173800 Carya illinoinensis
CiPaw.14G077900 Carya illinoinensis
ClCG02G021360 Citrullus lanatus
ClCG10G020210 Citrullus lanatus
COL.COLO4_18281 Corchorus olitorius
Cpa.g.sc65.27 Carica papaya
CsaV3_3G035890 Cucumis sativus L.
CSS0008426 Camellia sinensis var. sinensis
DCAR_014992 Daucus carota
Dinv32694 Davidia involucrata
Dinv37304 Davidia involucrata
Duzib106G1941 Durio zibethinus
Duzib168G2269 Durio zibethinus
Duzib170G0445 Durio zibethinus
ECA238G3047 Erigeron canadensis
ECA238G3169 Erigeron canadensis
EL10Ac7g16556 Beta vulgaris
EL10Ac9g22566 Beta vulgaris
Eucgr.K03591 Eucalyptus grandis
FAN02G2222 Fragaria x ananassa
FAN05G2535 Fragaria x ananassa
FAN09G2699 Fragaria x ananassa
FAN14G1284 Fragaria x ananassa
FAN16G3598 Fragaria x ananassa
FvH4_6g16190 Fragaria vesca
Glyma.19G000100 Glycine max
Glyma.20G081700 Glycine max
Gohir.A05G106000 Gossypium hirsutum
Gohir.A09G148000 Gossypium hirsutum
Gohir.D05G106066 Gossypium hirsutum
Gohir.D09G143800 Gossypium hirsutum
Gorai.006G165100 Gossypium raimondii
Gorai.009G110100 Gossypium raimondii
GSVIVG01025719001 Vitis vinifera
HanXRQChr02g0053431 Helianthus annuus
HanXRQChr07g0206501 Helianthus annuus
HanXRQChr09g0259341 Helianthus annuus
Haze_20563 Corylus avellana
Haze_23917 Corylus avellana
Hma1.2p1_0297F.1_g117010 Hydrangea macrophylla
HPP92_026817 Vanilla planifolia
Hund05968 Selenicereus undatus
Lalb_Chr11g0073041 Lupinus albus
Lj1A198G34 Lonicera japonica
Lj2P116T30 Lonicera japonica
Lj4g0021155 Lotus japonicus
Lsat_1_v5_gn_2_106641 Lactuca sativa
Lsat_1_v5_gn_2_99540 Lactuca sativa
Manes.11G149500 Manihot esculenta
Manes.13G072800 Manihot esculenta
MBI19_g30280_MAGBIO Magnolia biondii
MD03G1124300 Malus domestica
MD04G1094800 Malus domestica
Medtr1g045880 Medicago truncatula
MELO3C009348.2 Cucumis melo
Migut.J00519 Erythranthe guttata
Nitab4.5_0001297g0090 Nicotiana tabacum
Nitab4.5_0001297g0100 Nicotiana tabacum
Nitab4.5_0005518g0020 Nicotiana tabacum
Nn2g11560 Nelumbo nucifera
Oeu034113.1 Olea europaea
Oeu047722.1 Olea europaea
Peaxi162Scf00311g00013 Petunia axillaris
Peaxi162Scf00450g00074 Petunia axillaris
PGR083G1347 Punica granatum
PGR102G0358 Punica granatum
PGSC0003DMG400010458 Solanum tuberosum
PGSC0003DMG400015738 Solanum tuberosum
PGSC0003DMG401010456 Solanum tuberosum
Phvul.007G232500 Phaseolus vulgaris
Potri.003G008900 Populus trichocarpa
Prupe.6G107000 Prunus persica
Prupe.6G234000 Prunus persica
Psat6g106920 Pisum sativum
PSO063G1866 Papaver somniferum
PSO339G5596 Papaver somniferum
QL01p037114 Quercus lobata
QL07p044001 Quercus lobata
QL09p049934 Quercus lobata
RcHm_v2.0_Chr3g0470041 Rosa chinensis
RcHm_v2.0_Chr5g0057911 Rosa chinensis
RcHm_v2.0_Chr5g0057961 Rosa chinensis
RcHm_v2.0_Chr5g0058011 Rosa chinensis
RcHm_v2.0_Chr5g0058021 Rosa chinensis
RcHm_v2.0_Chr5g0058061 Rosa chinensis
RcHm_v2.0_Chr5g0058071 Rosa chinensis
Rhsim02G0187700 Rhododendron simsii
Rhsim04G0144500 Rhododendron simsii
Rhsim07G0183700 Rhododendron simsii
Sabra03G0004500 Salix brachista
SalBow2G0603 Salvia bowleyana
SalBow2G0953 Salvia bowleyana
SalBow3G3143 Salvia bowleyana
Sc15g0001630 Simmondsia chinensis
Sc20g0005250 Simmondsia chinensis
Sed0023037 Sechium edule
SEGI_04056 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24836 Striga asiatica
SHI12481 Sapria himalayana
Solyc06g010270.1 Solanum lycopersicum
Solyc06g010275.1 Solanum lycopersicum
Solyc10g084090.3 Solanum lycopersicum
Sopen06g005230 Solanum pennellii
Sopen10g033540 Solanum pennellii
Sopen10g033550 Solanum pennellii
Sp4g10830 Schrenkiella parvula
Sp4g14950 Schrenkiella parvula
TAR633G0618 Trochodendron aralioides
TAR633G1109 Trochodendron aralioides
TAR633G2036 Trochodendron aralioides
THA.LOC104816036 Tarenaya hassleriana
Thecc.05G064100 Theobroma cacao
Thecc.09G346900 Theobroma cacao
Thhalv10016624m.g Eutrema salsugineum
Thhalv10017786m.g Eutrema salsugineum
TPR.G23963 Trifolium pratense
TWI74G0375 Tripterygium wilfordii
TWI75G0856 Tripterygium wilfordii
VMungo0720G0391 Vigna mungo

User provided reference genes

Program Settings