Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p14290 Brassica napus
Aa31LG7G2820 Aethionema arabicum
Actinidia12362 Actinidia chinensis
Actinidia20623 Actinidia chinensis
Ah.13g074660 Amaranthus hybridus
AL1G30650 Arabidopsis lyrata
Aqoxy3G00045 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3FM8Z5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FFN37F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3PSJH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ME0Z4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PNMJ0W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QLLT1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6Z25U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5GTH2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y8MDWH Arachis hypogaea
AT1G18270 Arabidopsis thaliana
ATR0283G001 Amborella trichopoda
ATR0568G088 Amborella trichopoda
ATR0629G095 Amborella trichopoda
ATR1102G008 Amborella trichopoda
ATR1102G022 Amborella trichopoda
ATR1102G040 Amborella trichopoda
ATR1177G001 Amborella trichopoda
Atru.chr9.1674 Acer truncatum
AUR62035874 Chenopodium quinoa
BcaB07g31814 Brassica carinata
BcaC05g25721 Brassica carinata
BolC5t30352H Brassica oleracea
BraA06t24558Z Brassica rapa
C05p16550 Brassica napus
CAN.G843.50 Capsicum annuum
CANSAT21G0981 Cannabis sativa
CARHR018830 Cardamine hirsuta
Carub.0001s1789 Capsella rubella
Ca_25341_v3 Cicer arietinum L.
Ca_25342_v3 Cicer arietinum L.
Ca_29429_v3 Cicer arietinum L.
CBR_g29815 Chara braunii
CBR_g29818 Chara braunii
Cc04_g06150 Coffea canephora
Cc04_g06160 Coffea canephora
CDE05G2038 Ceratophyllum demersum
CDE05G3247 Ceratophyllum demersum
Cfa024457 Carpinus fangiana
Cfa024458 Carpinus fangiana
Ciclev10008504m.g Citrus clementina
Ciclev10009360m.g Citrus clementina
Ciclev10009694m.g Citrus clementina
Ciclev10010566m.g Citrus clementina
CiPaw.10G048800 Carya illinoinensis
CiPaw.15G144100 Carya illinoinensis
ClCG06G014240 Citrullus lanatus
COL.COLO4_06962 Corchorus olitorius
Cpa.g.sc3.389 Carica papaya
Cpa.g.sc3.390 Carica papaya
CsaV3_1G004440 Cucumis sativus L.
CSS0009641 Camellia sinensis var. sinensis
CSS0013925 Camellia sinensis var. sinensis
DCAR_012097 Daucus carota
Duzib084G0705 Durio zibethinus
ECA233G1972 Erigeron canadensis
EL10Ac3g06691 Beta vulgaris
Eucgr.B00882 Eucalyptus grandis
Eucgr.B00991 Eucalyptus grandis
FAN04G2545 Fragaria x ananassa
FAN08G2057 Fragaria x ananassa
FAN13G1575 Fragaria x ananassa
FAN18G0674 Fragaria x ananassa
FvH4_5g17450 Fragaria vesca
Glyma.07G103000 Glycine max
Glyma.09G175050 Glycine max
Gohir.A03G092900 Gossypium hirsutum
Gohir.D02G121800 Gossypium hirsutum
Gorai.005G132300 Gossypium raimondii
GSVIVG01008461001 Vitis vinifera
HanXRQChr06g0164211 Helianthus annuus
HanXRQChr08g0222811 Helianthus annuus
HanXRQChr17g0559181 Helianthus annuus
Haze_18876 Corylus avellana
Hma1.2p1_0163F.1_g073040 Hydrangea macrophylla
Hma1.2p1_0163F.1_g073050 Hydrangea macrophylla
Hma1.2p1_1360F.1_g278110 Hydrangea macrophylla
HPP92_023491 Vanilla planifolia
Lalb_Chr14g0370611 Lupinus albus
Lj2g0021015 Lotus japonicus
Lj5A159T43 Lonicera japonica
Lsat_1_v5_gn_1_27880 Lactuca sativa
Lsat_1_v5_gn_8_141761 Lactuca sativa
Manes.06G005200 Manihot esculenta
Mapoly0094s0055 Marchantia polymorpha
MBI12_g17290_MAGBIO Magnolia biondii
MD14G1237000 Malus domestica
Medtr6g069660 Medicago truncatula
Medtr6g069685 Medicago truncatula
MELO3C017366.2 Cucumis melo
Migut.I00270 Erythranthe guttata
MSTRG.11304 Avicennia marina
Nitab4.5_0000340g0020 Nicotiana tabacum
Nitab4.5_0001264g0010 Nicotiana tabacum
Nitab4.5_0010223g0010 Nicotiana tabacum
Nn009s41423 Nelumbo nucifera
Nn4g24265 Nelumbo nucifera
Nn4g24266 Nelumbo nucifera
Nn4g24267 Nelumbo nucifera
Nn7g38444 Nelumbo nucifera
Oeu026271.2 Olea europaea
Os06g0258900 Oryza sativa ssp. japonica
Peaxi162Scf00314g00334 Petunia axillaris
PGR083G1460 Punica granatum
Phvul.004G150100 Phaseolus vulgaris
Potri.015G037000 Populus trichocarpa
Pp3c23_11630 Physcomitrium patens
Pp3s34_503 Physcomitrium patens
Prupe.5G234300 Prunus persica
Psat1g030920 Pisum sativum
PSO017G0085 Papaver somniferum
PSO478G1825 Papaver somniferum
QL10p030432 Quercus lobata
QL10p030449 Quercus lobata
RcHm_v2.0_Chr7g0178241 Rosa chinensis
Rhsim08G0126700 Rhododendron simsii
Sabra15G0030400 Salix brachista
Sabra15G0030600 Salix brachista
Sabra15G0030700 Salix brachista
Sabra15G0030800 Salix brachista
Sabra15G0030900 Salix brachista
Sabra15G0031800 Salix brachista
Sabra15G0032100 Salix brachista
Sabra15G0032200 Salix brachista
Sabra15G0032400 Salix brachista
Sabra15G0032500 Salix brachista
Sabra15G0032700 Salix brachista
Sabra15G0033200 Salix brachista
Sabra15G0033300 Salix brachista
Sabra15G0033400 Salix brachista
Sabra15G0033600 Salix brachista
Sabra15G0036000 Salix brachista
Sabra15G0036200 Salix brachista
Sabra15G0058300 Salix brachista
Sabra15G0058400 Salix brachista
Sabra15G0059400 Salix brachista
Sabra15G0062000 Salix brachista
Sabra15G0062100 Salix brachista
Sabra15G0062200 Salix brachista
SalBow7G0492 Salvia bowleyana
Sc10g0009220 Simmondsia chinensis
Sc10g0009230 Simmondsia chinensis
Sed0023132 Sechium edule
SEGI_15506 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11766 Striga asiatica
SMO117G0106 Selaginella moellendorffii
Solyc03g118640.3 Solanum lycopersicum
Sopen03g037600 Solanum pennellii
Sp1g16240 Schrenkiella parvula
TAR629G2841 Trochodendron aralioides
TAR629G3411 Trochodendron aralioides
Thecc.03G057600 Theobroma cacao
Thhalv10006567m.g Eutrema salsugineum
TPR.G8645 Trifolium pratense
TWI81G0051 Tripterygium wilfordii
unitig_749.g14137 Utricularia gibba
unitig_749.g14138 Utricularia gibba
vmacro17774 Vaccinium macrocarpon
vmacro17775 Vaccinium macrocarpon
VMungo0464G0766 Vigna mungo
Zm00001eb280650 Zea mays

User provided reference genes

Program Settings