Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21670 Brassica napus
A01p21680 Brassica napus
Aa31LG1G15090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.727 Anthoceros agrestis
Actinidia36561 Actinidia chinensis
Ah.03g140880 Amaranthus hybridus
AL8G23350 Arabidopsis lyrata
AL954U10020 Arabidopsis lyrata
Aqoxy5G01628 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05783X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BIDD64 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UBH4LM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UMLA17 Arachis hypogaea
AT5G49555 Arabidopsis thaliana
ATR0733G178 Amborella trichopoda
Atru.chr3.571 Acer truncatum
Atru.chr3.575 Acer truncatum
Atru.chr3.576 Acer truncatum
AUR62004054 Chenopodium quinoa
AUR62004055 Chenopodium quinoa
AUR62007569 Chenopodium quinoa
BcaC09g50275 Brassica carinata
BcaC09g50281 Brassica carinata
BcaNung00241 Brassica carinata
BolC1t02651H Brassica oleracea
BraA01t02076Z Brassica rapa
BraA01t02077Z Brassica rapa
C01p27030 Brassica napus
CAN.G358.93 Capsicum annuum
CANSAT01G2654 Cannabis sativa
CARHR281200 Cardamine hirsuta
Carub.0008s2797 Capsella rubella
Ca_12487_v3 Cicer arietinum L.
Ca_22268_v3 Cicer arietinum L.
Ca_22281_v3 Cicer arietinum L.
Cc11_g04410 Coffea canephora
CDE04G2049 Ceratophyllum demersum
Ciclev10025284m.g Citrus clementina
Ciclev10025293m.g Citrus clementina
CiPaw.01G038300 Carya illinoinensis
CiPaw.02G018000 Carya illinoinensis
ClCG01G019560 Citrullus lanatus
ClCG07G008350 Citrullus lanatus
ClCG07G008360 Citrullus lanatus
ClCG07G008370 Citrullus lanatus
ClCG07G008380 Citrullus lanatus
COL.COLO4_22077 Corchorus olitorius
COL.COLO4_22078 Corchorus olitorius
Cpa.g.sc39.20 Carica papaya
Cpa.g.sc6.114 Carica papaya
CsaV3_4G005780 Cucumis sativus L.
CsaV3_6G046240 Cucumis sativus L.
CSS0006960 Camellia sinensis var. sinensis
DCAR_017290 Daucus carota
Dinv13532 Davidia involucrata
Dinv39988 Davidia involucrata
Duzib147G0019 Durio zibethinus
Duzib147G1661 Durio zibethinus
Duzib264G0995 Durio zibethinus
ECA232G3289 Erigeron canadensis
EL10Ac6g15559 Beta vulgaris
Eucgr.D01664 Eucalyptus grandis
Eucgr.D02612 Eucalyptus grandis
FAN19G0724 Fragaria x ananassa
FAN23G1347 Fragaria x ananassa
FAN26G0083 Fragaria x ananassa
FAN28G2031 Fragaria x ananassa
FvH4_1g13300 Fragaria vesca
Glyma.02G056800 Glycine max
Glyma.16G139600 Glycine max
Gohir.A02G165500 Gossypium hirsutum
Gohir.A02G165600 Gossypium hirsutum
Gohir.D03G014400 Gossypium hirsutum
Gohir.D03G014500 Gossypium hirsutum
Gorai.003G014700 Gossypium raimondii
Gorai.003G014800 Gossypium raimondii
GSVIVG01018957001 Vitis vinifera
GSVIVG01018958001 Vitis vinifera
HanXRQChr09g0274621 Helianthus annuus
Haze_15087 Corylus avellana
Hma1.2p1_0224F.1_g094630 Hydrangea macrophylla
Hma1.2p1_0400F.1_g144420 Hydrangea macrophylla
HPP92_017686 Vanilla planifolia
Hund13977 Selenicereus undatus
Hund13978 Selenicereus undatus
Hund13979 Selenicereus undatus
Hund13980 Selenicereus undatus
Lalb_Chr05g0227621 Lupinus albus
Lj1g0003213 Lotus japonicus
Lj1g0003281 Lotus japonicus
Lj2C453G4 Lonicera japonica
LjContig00448g0013547 Lotus japonicus
LjContig00448g0018994 Lotus japonicus
Lsat_1_v5_gn_4_152121 Lactuca sativa
Manes.02G094600 Manihot esculenta
Mapoly0014s0043 Marchantia polymorpha
MD02G1147300 Malus domestica
MD15G1261600 Malus domestica
Medtr1g034450 Medicago truncatula
Medtr8g077580 Medicago truncatula
MELO3C007827.2 Cucumis melo
MELO3C016373.2 Cucumis melo
MSTRG.2762 Avicennia marina
Nitab4.5_0000178g0050 Nicotiana tabacum
Nitab4.5_0001385g0110 Nicotiana tabacum
Nn5g29614 Nelumbo nucifera
Oeu009415.3 Olea europaea
Oeu033644.1 Olea europaea
Oeu041447.3 Olea europaea
Oeu051950.1 Olea europaea
Oeu056756.2 Olea europaea
Os12g0631800 Oryza sativa ssp. japonica
Peaxi162Scf00366g00011 Petunia axillaris
PGR102G0408 Punica granatum
PGR102G3108 Punica granatum
PGSC0003DMG402003505 Solanum tuberosum
Phvul.003G073200 Phaseolus vulgaris
Phvul.003G253700 Phaseolus vulgaris
Potri.007G025300 Populus trichocarpa
Pp3c15_20190 Physcomitrium patens
PRCOL_00003920 Prasinoderma coloniale
Prupe.7G154800 Prunus persica
Prupe.7G154900 Prunus persica
Psat4g093040 Pisum sativum
Psat4g093160 Pisum sativum
PSO170G5998 Papaver somniferum
PSO210G3399 Papaver somniferum
QL06p046103 Quercus lobata
QL06p046182 Quercus lobata
QL06p046194 Quercus lobata
RcHm_v2.0_Chr2g0101541 Rosa chinensis
Rhsim10G0122600 Rhododendron simsii
Rhsim10G0122800 Rhododendron simsii
Sabra07G0022400 Salix brachista
SalBow1G7108 Salvia bowleyana
Sc03g0002980 Simmondsia chinensis
Sed0017564 Sechium edule
Sed0021773 Sechium edule
SEGI_15174 Sequoiadendron giganteum
SEGI_19545 Sequoiadendron giganteum
SEGI_32759 Sequoiadendron giganteum
SGA_v2.0_scaffold614G53203 Striga asiatica
SMO194G0022 Selaginella moellendorffii
SMO358G0577 Selaginella moellendorffii
Solyc02g085250.4 Solanum lycopersicum
Sopen02g029950 Solanum pennellii
Sp7g14220 Schrenkiella parvula
TAR625G0258 Trochodendron aralioides
THA.LOC104821290 Tarenaya hassleriana
THA.LOC104821294 Tarenaya hassleriana
THA.LOC104821560 Tarenaya hassleriana
Thecc.01G000700 Theobroma cacao
Thecc.01G035500 Theobroma cacao
Thecc.01G035600 Theobroma cacao
Thhalv10024792m.g Eutrema salsugineum
TPR.G18620 Trifolium pratense
TPR.G24109 Trifolium pratense
TPR.G36286 Trifolium pratense
TWI73G1034 Tripterygium wilfordii
unitig_21.g20954 Utricularia gibba
vmacro12726 Vaccinium macrocarpon
vmacro12727 Vaccinium macrocarpon
VMungo0251G3189 Vigna mungo
Zm00001eb232720 Zea mays
Zm00001eb293990 Zea mays
Zm00001eb412790 Zea mays
Zm00001eb420900 Zea mays

User provided reference genes

Program Settings