Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33120 Brassica napus
A04p33130 Brassica napus
A05p04060 Brassica napus
A05p04090 Brassica napus
Aa31LG1G25620 Aethionema arabicum
Aa31LG1G25630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis
Actinidia34567 Actinidia chinensis
AL4G42780 Arabidopsis lyrata
AL4G42810 Arabidopsis lyrata
Aqoxy5G00067 Aquilegia oxysepala
AT2G43910 Arabidopsis thaliana
AT2G43920 Arabidopsis thaliana
AT2G43940 Arabidopsis thaliana
ATR0743G017 Amborella trichopoda
Atru.chr3.2004 Acer truncatum
AUR62002468 Chenopodium quinoa
AUR62002469 Chenopodium quinoa
AUR62023720 Chenopodium quinoa
AUR62023721 Chenopodium quinoa
BcaB02g08885 Brassica carinata
BcaB02g08886 Brassica carinata
BcaB02g08889 Brassica carinata
BcaB02g08891 Brassica carinata
BcaB02g08894 Brassica carinata
BcaB06g29349 Brassica carinata
BcaB06g29506 Brassica carinata
BcaB06g29507 Brassica carinata
BcaB06g29508 Brassica carinata
BcaC02g07142 Brassica carinata
BcaC02g07143 Brassica carinata
BcaC02g12352 Brassica carinata
BcaC02g12353 Brassica carinata
BolC3t15278H Brassica oleracea
BolC4t22114H Brassica oleracea
BolC4t22116H Brassica oleracea
BolC4t22117H Brassica oleracea
BolC4t28584H Brassica oleracea
BolC4t28585H Brassica oleracea
BolC7t41877H Brassica oleracea
BolC8t49376H Brassica oleracea
BraA03t09486Z Brassica rapa
BraA04t18771Z Brassica rapa
BraA04t18772Z Brassica rapa
BraA05t19394Z Brassica rapa
BraA05t19396Z Brassica rapa
C02p63480 Brassica napus
C03p29320 Brassica napus
C04p04840 Brassica napus
C04p04860 Brassica napus
C04p04870 Brassica napus
C04p70820 Brassica napus
C04p70830 Brassica napus
C08p17510 Brassica napus
C08p48990 Brassica napus
C09p12990 Brassica napus
CAN.G607.4 Capsicum annuum
CARHR139100 Cardamine hirsuta
CARHR139110 Cardamine hirsuta
Carub.0004s2647 Capsella rubella
Carub.0004s2648 Capsella rubella
Carub.0004s2650 Capsella rubella
Cc03_g16020 Coffea canephora
CDE07G0873 Ceratophyllum demersum
Cfa008510 Carpinus fangiana
Cfa025661 Carpinus fangiana
Ciclev10024361m.g Citrus clementina
CiPaw.01G201200 Carya illinoinensis
ClCG04G002900 Citrullus lanatus
COL.COLO4_19904 Corchorus olitorius
Cpa.g.sc151.2 Carica papaya
Cpa.g.sc151.3 Carica papaya
Cpa.g.sc151.4 Carica papaya
Cre04.g215600 Chlamydomonas reinhardtii
CsaV3_4G029860 Cucumis sativus L.
CSS0037089 Camellia sinensis var. sinensis
CSS0044272 Camellia sinensis var. sinensis
DCAR_027496 Daucus carota
Dinv24754 Davidia involucrata
Duzib093G0712 Durio zibethinus
EL10Ac3g06159 Beta vulgaris
EL10Ac3g06161 Beta vulgaris
Eucgr.A00430 Eucalyptus grandis
FAN23G1087 Fragaria x ananassa
FAN23G1236 Fragaria x ananassa
FAN26G1858 Fragaria x ananassa
FAN28G1175 Fragaria x ananassa
FvH4_1g00240 Fragaria vesca
Gohir.A09G169300 Gossypium hirsutum
Gohir.D09G165000 Gossypium hirsutum
Gorai.006G186800 Gossypium raimondii
GSVIVG01038246001 Vitis vinifera
GSVIVG01038247001 Vitis vinifera
Haze_11140 Corylus avellana
Haze_11142 Corylus avellana
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla
HPP92_011579 Vanilla planifolia
HPP92_011580 Vanilla planifolia
HPP92_011581 Vanilla planifolia
HPP92_011584 Vanilla planifolia
Hund12312 Selenicereus undatus
Lj6A284T20 Lonicera japonica
Manes.01G010300 Manihot esculenta
Mapoly0115s0024 Marchantia polymorpha
MBI10_g23575_MAGBIO Magnolia biondii
MBI10_g45897_MAGBIO Magnolia biondii
MCO07G181 Micromonas commoda
MD15G1143500 Malus domestica
MELO3C033208.2 Cucumis melo
Migut.G00862 Erythranthe guttata
MSTRG.9267 Avicennia marina
Nitab4.5_0000013g0070 Nicotiana tabacum
Nitab4.5_0007944g0050 Nicotiana tabacum
Nn1g09449 Nelumbo nucifera
Nn1g09453 Nelumbo nucifera
Oeu064015.2 Olea europaea
Os03g0843800 Oryza sativa ssp. japonica
Os06g0153900 Oryza sativa ssp. japonica
Peaxi162Scf01205g00038 Petunia axillaris
PGR042G1833 Punica granatum
PGSC0003DMG400025227 Solanum tuberosum
Potri.017G007000 Populus trichocarpa
Pp3c12_16530 Physcomitrium patens
Pp3c20_12020 Physcomitrium patens
Pp3c2_32550 Physcomitrium patens
Pp3c2_32630 Physcomitrium patens
PRCOL_00002738 Prasinoderma coloniale
Prupe.7G269600 Prunus persica
PSO541G0314 Papaver somniferum
PSO541G3219 Papaver somniferum
PSO541G3414 Papaver somniferum
PSO541G5503 Papaver somniferum
PSO541G6333 Papaver somniferum
PSO675G1470 Papaver somniferum
PSO675G2456 Papaver somniferum
PSO675G2958 Papaver somniferum
PSO675G5594 Papaver somniferum
PSO675G8665 Papaver somniferum
QL10p064195 Quercus lobata
RcHm_v2.0_Chr2g0084541 Rosa chinensis
SalBow3G0617 Salvia bowleyana
Sed0024580 Sechium edule
SEGI_12768 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14917 Striga asiatica
SGA_v2.0_scaffold37G14935 Striga asiatica
SMO144G0018 Selaginella moellendorffii
Solyc08g014600.4 Solanum lycopersicum
Sopen08g005580 Solanum pennellii
Sp4g26000 Schrenkiella parvula
Sp4g26010 Schrenkiella parvula
Sp4g26020 Schrenkiella parvula
Sp4g26030 Schrenkiella parvula
TAR633G0865 Trochodendron aralioides
THA.LOC104802342 Tarenaya hassleriana
THA.LOC104804252 Tarenaya hassleriana
THA.LOC104804276 Tarenaya hassleriana
THA.LOC104824119 Tarenaya hassleriana
THA.LOC104824126 Tarenaya hassleriana
Thecc.05G001900 Theobroma cacao
Thhalv10001612m.g Eutrema salsugineum
Thhalv10001619m.g Eutrema salsugineum
Thhalv10001708m.g Eutrema salsugineum
Thhalv10019674m.g Eutrema salsugineum
TWI15G0032 Tripterygium wilfordii
unitig_0.g2413 Utricularia gibba
vmacro00720 Vaccinium macrocarpon
vmacro05005 Vaccinium macrocarpon

User provided reference genes

Program Settings