Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p20620 Brassica napus
Aa31LG4G15890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1092 Anthoceros agrestis
Actinidia15321 Actinidia chinensis
Actinidia22552 Actinidia chinensis
Actinidia29827 Actinidia chinensis
Actinidia38010 Actinidia chinensis
Ah.12g056070 Amaranthus hybridus
AL5G26160 Arabidopsis lyrata
Aqoxy2G01756 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.20SHP8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3ZQ4SN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Q4PR4 Arachis hypogaea
AT3G46940 Arabidopsis thaliana
ATR0124G052 Amborella trichopoda
Atru.chr13.1763 Acer truncatum
Atru.chr13.1771 Acer truncatum
Atru.chr13.494 Acer truncatum
Atru.chr2.1957 Acer truncatum
Atru.chr6.1642 Acer truncatum
Atru.chr6.1643 Acer truncatum
AUR62007424 Chenopodium quinoa
AUR62027309 Chenopodium quinoa
BolC3t19396H Brassica oleracea
BraA06t25141Z Brassica rapa
C03p71110 Brassica napus
CAN.G1226.1 Capsicum annuum
CAN.G1273.28 Capsicum annuum
CAN.G134.178 Capsicum annuum
CANSAT11G0204 Cannabis sativa
CARHR155580 Cardamine hirsuta
Carub.0005s1316 Capsella rubella
Ca_15096_v3 Cicer arietinum L.
Ca_31056_v3 Cicer arietinum L.
CBR_g21266 Chara braunii
CBR_g21272 Chara braunii
CBR_g37457 Chara braunii
Cc00_g32610 Coffea canephora
Cc10_g02990 Coffea canephora
Cc10_g03000 Coffea canephora
CDE04G3793 Ceratophyllum demersum
CDE12G0639 Ceratophyllum demersum
Cfa018144 Carpinus fangiana
Cfa018886 Carpinus fangiana
Ciclev10002428m.g Citrus clementina
Ciclev10009684m.g Citrus clementina
CiPaw.15G077400 Carya illinoinensis
ClCG08G015180 Citrullus lanatus
COL.COLO4_04917 Corchorus olitorius
COL.COLO4_26330 Corchorus olitorius
Cpa.g.sc36.67 Carica papaya
Cre16.g667850 Chlamydomonas reinhardtii
CsaV3_2G028630 Cucumis sativus L.
DCAR_020361 Daucus carota
DCAR_020970 Daucus carota
Dinv03456 Davidia involucrata
Dinv36073 Davidia involucrata
Duzib093G0228 Durio zibethinus
Duzib116G0455 Durio zibethinus
ECA246G2445 Erigeron canadensis
EL10Ac5g11904 Beta vulgaris
Eucgr.C01497 Eucalyptus grandis
Eucgr.F01560 Eucalyptus grandis
Eucgr.L03680 Eucalyptus grandis
FAN15G2450 Fragaria x ananassa
FAN27G0770 Fragaria x ananassa
FvH4_2g39911 Fragaria vesca
Glyma.14G207800 Glycine max
Glyma.18G048400 Glycine max
Gohir.A05G194800 Gossypium hirsutum
Gohir.D05G198000 Gossypium hirsutum
Gorai.009G203100 Gossypium raimondii
GSVIVG01009696001 Vitis vinifera
GSVIVG01037336001 Vitis vinifera
HanXRQChr05g0151891 Helianthus annuus
HanXRQChr08g0223611 Helianthus annuus
HPP92_000905 Vanilla planifolia
HPP92_000939 Vanilla planifolia
Hund11091 Selenicereus undatus
Lalb_Chr10g0103901 Lupinus albus
Lalb_Chr17g0345751 Lupinus albus
Lj4A41T61 Lonicera japonica
Lsat_1_v5_gn_5_29181 Lactuca sativa
Lsat_1_v5_gn_8_78860 Lactuca sativa
Manes.05G161000 Manihot esculenta
Manes.18G027901 Manihot esculenta
Mapoly0133s0010 Marchantia polymorpha
MBI16_g37698_MAGBIO Magnolia biondii
MBI16_g37752_MAGBIO Magnolia biondii
MCO05G374 Micromonas commoda
MD08G1034400 Malus domestica
MD08G1034500 Malus domestica
MD15G1031300 Malus domestica
Medtr3g063110 Medicago truncatula
MELO3C010935.2 Cucumis melo
Migut.N00497 Erythranthe guttata
MSTRG.1283 Avicennia marina
MSTRG.22299 Avicennia marina
Nitab4.5_0000110g0590 Nicotiana tabacum
Nitab4.5_0002361g0180 Nicotiana tabacum
Nitab4.5_0002612g0110 Nicotiana tabacum
Nitab4.5_0002840g0080 Nicotiana tabacum
Nitab4.5_0004954g0010 Nicotiana tabacum
Nitab4.5_0006179g0050 Nicotiana tabacum
Nn1g05030 Nelumbo nucifera
Nn5g29570 Nelumbo nucifera
Oeu029862.1 Olea europaea
Oeu029863.1 Olea europaea
Oeu049959.1 Olea europaea
Oeu049960.1 Olea europaea
Oeu056187.1 Olea europaea
Os03g0669100 Oryza sativa ssp. japonica
Peaxi162Scf00037g01715 Petunia axillaris
Peaxi162Scf00225g00127 Petunia axillaris
Peaxi162Scf00690g00216 Petunia axillaris
PGR031G3519 Punica granatum
PGSC0003DMG400005159 Solanum tuberosum
PGSC0003DMG400022502 Solanum tuberosum
PGSC0003DMG400024725 Solanum tuberosum
Phvul.008G243100 Phaseolus vulgaris
Potri.002G261900 Populus trichocarpa
Pp3c16_25660 Physcomitrium patens
PRCOL_00002276 Prasinoderma coloniale
Prupe.1G380600 Prunus persica
Psat5g146640 Pisum sativum
PSO591G0217 Papaver somniferum
PSO764G0231 Papaver somniferum
PSO832G4589 Papaver somniferum
QL02p008145 Quercus lobata
QL02p008410 Quercus lobata
RcHm_v2.0_Chr6g0300871 Rosa chinensis
Rhsim06G0034500 Rhododendron simsii
Rhsim07G0237700 Rhododendron simsii
Sabra02G0198600 Salix brachista
SalBow8G3107 Salvia bowleyana
Sc02g0006240 Simmondsia chinensis
Sed0016726 Sechium edule
SEGI_12681 Sequoiadendron giganteum
SEGI_17618 Sequoiadendron giganteum
SGA_v2.0_scaffold326G48710 Striga asiatica
SHI03308 Sapria himalayana
SHI09478 Sapria himalayana
SMO146G0275 Selaginella moellendorffii
Solyc01g097970.4 Solanum lycopersicum
Solyc01g100030.5.1 Solanum lycopersicum
Solyc04g080250.3 Solanum lycopersicum
Sopen01g041550 Solanum pennellii
Sopen01g043550 Solanum pennellii
Sopen04g033830 Solanum pennellii
Sp5g14800 Schrenkiella parvula
TAR365G0431 Trochodendron aralioides
TAR381G1372 Trochodendron aralioides
THA.LOC104813208 Tarenaya hassleriana
Thecc.08G025300 Theobroma cacao
Thhalv10011147m.g Eutrema salsugineum
TPR.G19056 Trifolium pratense
TPR.G37404 Trifolium pratense
TWI12G0235 Tripterygium wilfordii
TWI36G0248 Tripterygium wilfordii
TWI56G0048 Tripterygium wilfordii
unitig_578.g16734 Utricularia gibba
unitig_85.g27240 Utricularia gibba
unitig_85.g27241 Utricularia gibba
vmacro04520 Vaccinium macrocarpon
vmacro21634 Vaccinium macrocarpon
VMungo0647G1970 Vigna mungo
Zm00001eb052270 Zea mays

User provided reference genes

Program Settings