Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35220 Brassica napus
A05p40830 Brassica napus
Aa31sc160G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2277 Anthoceros agrestis
Actinidia09449 Actinidia chinensis
Actinidia30024 Actinidia chinensis
Ah.08g218810 Amaranthus hybridus
AL3G18670 Arabidopsis lyrata
Aqoxy6G00008 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B3QQP1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C3KWK0 Arachis hypogaea
AT3G07370 Arabidopsis thaliana
ATR1089G106 Amborella trichopoda
ATR1089G125 Amborella trichopoda
Atru.chr6.1590 Acer truncatum
AUR62001176 Chenopodium quinoa
AUR62022149 Chenopodium quinoa
BcaB03g14705 Brassica carinata
BcaC01g04288 Brassica carinata
BcaC05g29732 Brassica carinata
BolC3t16550H Brassica oleracea
BolC5t34648H Brassica oleracea
BraA03t12700Z Brassica rapa
BraA05t22813Z Brassica rapa
C03p42820 Brassica napus
C05p59920 Brassica napus
CAN.G874.23 Capsicum annuum
CANSAT01G3145 Cannabis sativa
CARHR082020 Cardamine hirsuta
Carub.0003s0692 Capsella rubella
Ca_23194_v3 Cicer arietinum L.
CBR_g45609 Chara braunii
Cc01_g16370 Coffea canephora
CDE02G2083 Ceratophyllum demersum
CDE02G2920 Ceratophyllum demersum
CDE02G4582 Ceratophyllum demersum
CDE04G2706 Ceratophyllum demersum
CDE04G3536 Ceratophyllum demersum
CDE07G0764 Ceratophyllum demersum
CDE08G0299 Ceratophyllum demersum
CDE08G0461 Ceratophyllum demersum
Ciclev10032341m.g Citrus clementina
CiPaw.14G041400 Carya illinoinensis
ClCG07G002160 Citrullus lanatus
Cpa.g.sc8.96 Carica papaya
Cre03.g185750 Chlamydomonas reinhardtii
Cre11.g479650 Chlamydomonas reinhardtii
CsaV3_3G030120 Cucumis sativus L.
CSS0004420 Camellia sinensis var. sinensis
CSS0027325 Camellia sinensis var. sinensis
DCAR_012688 Daucus carota
Dinv22997 Davidia involucrata
Dinv28826 Davidia involucrata
Duzib133G0582 Durio zibethinus
Duzib138G0591 Durio zibethinus
ECA247G2839 Erigeron canadensis
ECA248G1394 Erigeron canadensis
EL10Ac7g17973 Beta vulgaris
Eucgr.K02106 Eucalyptus grandis
FAN15G3004 Fragaria x ananassa
FAN24G1844 Fragaria x ananassa
FAN27G1907 Fragaria x ananassa
FvH4_2g18060 Fragaria vesca
Glyma.03G088400 Glycine max
Glyma.16G085100 Glycine max
Glyma.16G085300 Glycine max
Gohir.A07G160100 Gossypium hirsutum
Gohir.A11G141100 Gossypium hirsutum
Gohir.D07G166200 Gossypium hirsutum
Gohir.D11G147533 Gossypium hirsutum
Gorai.007G158000 Gossypium raimondii
Gorai.N004500 Gossypium raimondii
GSVIVG01002214001 Vitis vinifera
GSVIVG01002276001 Vitis vinifera
GSVIVG01002499001 Vitis vinifera
GSVIVG01003018001 Vitis vinifera
HanXRQChr04g0095171 Helianthus annuus
HanXRQChr07g0193101 Helianthus annuus
Haze_03321 Corylus avellana
Haze_26226 Corylus avellana
Hma1.2p1_1492F.1_g286760 Hydrangea macrophylla
HPP92_004512 Vanilla planifolia
HPP92_004555 Vanilla planifolia
Hund05596 Selenicereus undatus
Hund18474 Selenicereus undatus
Lalb_Chr07g0194471 Lupinus albus
Lalb_Chr12g0210021 Lupinus albus
Lj2A1119T35 Lonicera japonica
Lj3g0027333 Lotus japonicus
Lsat_1_v5_gn_4_42981 Lactuca sativa
Lsat_1_v5_gn_5_178640 Lactuca sativa
Lsat_1_v5_gn_5_62140 Lactuca sativa
Lsat_1_v5_gn_9_17921 Lactuca sativa
Manes.12G051400 Manihot esculenta
Manes.13G052500 Manihot esculenta
Mapoly0011s0187 Marchantia polymorpha
Mapoly0073s0013 Marchantia polymorpha
MBI06_g17061_MAGBIO Magnolia biondii
MCO04G176 Micromonas commoda
MD05G1165100 Malus domestica
MD10G1154400 Malus domestica
Medtr8g011720 Medicago truncatula
MELO3C022725.2 Cucumis melo
Migut.N00649 Erythranthe guttata
MSTRG.17980 Avicennia marina
MSTRG.18817 Avicennia marina
Nitab4.5_0000296g0140 Nicotiana tabacum
Nitab4.5_0006979g0010 Nicotiana tabacum
Nitab4.5_0010482g0010 Nicotiana tabacum
Nitab4.5_0014406g0010 Nicotiana tabacum
Nn5g27088 Nelumbo nucifera
Oeu003652.1 Olea europaea
Oeu003653.1 Olea europaea
Oeu057843.1 Olea europaea
Os05g0104900 Oryza sativa ssp. japonica
Os08g0113300 Oryza sativa ssp. japonica
Peaxi162Scf00054g01110 Petunia axillaris
Peaxi162Scf01133g00024 Petunia axillaris
PGR044G2657 Punica granatum
PGSC0003DMG400020175 Solanum tuberosum
Phvul.008G134500 Phaseolus vulgaris
Phvul.010G029900 Phaseolus vulgaris
Potri.002G248700 Populus trichocarpa
Pp3c10_2570 Physcomitrium patens
Pp3c14_2850 Physcomitrium patens
PRCOL_00001170 Prasinoderma coloniale
Prupe.8G193300 Prunus persica
Psat4g205440 Pisum sativum
PSO017G4681 Papaver somniferum
PSO170G6432 Papaver somniferum
QL09p048906 Quercus lobata
QL09p048914 Quercus lobata
RcHm_v2.0_Chr6g0283451 Rosa chinensis
Rhsim13G0051200 Rhododendron simsii
Sabra02G0189400 Salix brachista
SalBow3G3517 Salvia bowleyana
Sc24g0003410 Simmondsia chinensis
Sed0000335 Sechium edule
Sed0023145 Sechium edule
SEGI_05764 Sequoiadendron giganteum
SEGI_12733 Sequoiadendron giganteum
SEGI_26081 Sequoiadendron giganteum
SEGI_29128 Sequoiadendron giganteum
SEGI_38402 Sequoiadendron giganteum
SGA_v2.0_scaffold77G25281 Striga asiatica
SGA_v2.0_scaffold95G28710 Striga asiatica
SMO165G0113 Selaginella moellendorffii
SMO364G0218 Selaginella moellendorffii
SMO367G1256 Selaginella moellendorffii
Solyc06g083150.3 Solanum lycopersicum
Sopen06g034540 Solanum pennellii
Sp3g06310 Schrenkiella parvula
TAR381G1198 Trochodendron aralioides
THA.LOC104802655 Tarenaya hassleriana
THA.LOC104818989 Tarenaya hassleriana
Thecc.01G214400 Theobroma cacao
Thhalv10021313m.g Eutrema salsugineum
TPR.G29357 Trifolium pratense
TWI18G0674 Tripterygium wilfordii
TWI36G0370 Tripterygium wilfordii
vmacro02805 Vaccinium macrocarpon
vmacro14707 Vaccinium macrocarpon
VMungo0251G0272 Vigna mungo
VMungo0331G0024 Vigna mungo
VMungo1383G0802 Vigna mungo
Zm00001eb260730 Zea mays
Zm00001eb267460 Zea mays

User provided reference genes

Program Settings