Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34530 Brassica napus
A05p01160 Brassica napus
A09p53910 Brassica napus
Aa31LG1G28030 Aethionema arabicum
Actinidia25370 Actinidia chinensis
Ah.05g179200 Amaranthus hybridus
AL4G46060 Arabidopsis lyrata
Aqoxy2G02545 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6W400J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YBIH8U Arachis hypogaea
AT2G46630 Arabidopsis thaliana
ATR0796G195 Amborella trichopoda
Atru.chr5.733 Acer truncatum
AUR62004535 Chenopodium quinoa
AUR62022719 Chenopodium quinoa
BcaC02g07046 Brassica carinata
BcaC02g12659 Brassica carinata
BcaC02g12660 Brassica carinata
BcaC02g12662 Brassica carinata
BcaC07g42602 Brassica carinata
BolC4t21785H Brassica oleracea
BolC4t28717H Brassica oleracea
BolC8t51254H Brassica oleracea
BraA04t18910Z Brassica rapa
BraA05t19116Z Brassica rapa
BraA09t40807Z Brassica rapa
C04p01320 Brassica napus
C04p72290 Brassica napus
C08p36720 Brassica napus
CAN.G211.7 Capsicum annuum
CARHR141970 Cardamine hirsuta
Carub.0004s2934 Capsella rubella
Carub.0005s2862 Capsella rubella
Ca_09531_v3 Cicer arietinum L.
CDE02G1230 Ceratophyllum demersum
Cfa003761 Carpinus fangiana
Ciclev10019915m.g Citrus clementina
CiPaw.02G042800 Carya illinoinensis
CiPaw.02G042900 Carya illinoinensis
CiPaw.02G043000 Carya illinoinensis
CiPaw.02G043100 Carya illinoinensis
CiPaw.02G043200 Carya illinoinensis
ClCG05G000580 Citrullus lanatus
ClCG05G000590 Citrullus lanatus
ClCG05G000600 Citrullus lanatus
ClCG06G002780 Citrullus lanatus
Cpa.g.sc144.11 Carica papaya
CsaV3_3G007790 Cucumis sativus L.
CsaV3_3G007800 Cucumis sativus L.
CsaV3_6G008950 Cucumis sativus L.
CSS0005133 Camellia sinensis var. sinensis
CSS0009998 Camellia sinensis var. sinensis
CSS0040523 Camellia sinensis var. sinensis
DCAR_002987 Daucus carota
Dinv18906 Davidia involucrata
Dinv32623 Davidia involucrata
Dinv32624 Davidia involucrata
Dinv34239 Davidia involucrata
Duzib133G0806 Durio zibethinus
Duzib138G0794 Durio zibethinus
ECA236G3302 Erigeron canadensis
ECA240G3602 Erigeron canadensis
EL10Ac1g00218 Beta vulgaris
Eucgr.D02643 Eucalyptus grandis
FAN01G2496 Fragaria x ananassa
FAN03G1939 Fragaria x ananassa
FAN06G2582 Fragaria x ananassa
FAN06G4791 Fragaria x ananassa
FAN10G0542 Fragaria x ananassa
FAN10G1700 Fragaria x ananassa
FAN12G0333 Fragaria x ananassa
FAN17G2081 Fragaria x ananassa
FAN22G2040 Fragaria x ananassa
FvH4_4g01200 Fragaria vesca
FvH4_7g17260 Fragaria vesca
Glyma.03G259500 Glycine max
Glyma.07G052566 Glycine max
Glyma.07G052632 Glycine max
Glyma.16G021450 Glycine max
Glyma.16G021500 Glycine max
Glyma.19G258400 Glycine max
Gohir.A07G135500 Gossypium hirsutum
Gohir.A11G099300 Gossypium hirsutum
Gohir.D07G140400 Gossypium hirsutum
Gohir.D11G103800 Gossypium hirsutum
Gorai.001G152400 Gossypium raimondii
Gorai.007G111100 Gossypium raimondii
GSVIVG01027399001 Vitis vinifera
GSVIVG01027401001 Vitis vinifera
Haze_15699 Corylus avellana
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla
HPP92_023037 Vanilla planifolia
Lalb_Chr04g0261381 Lupinus albus
Lalb_Chr04g0261391 Lupinus albus
Lalb_Chr10g0100731 Lupinus albus
Lalb_Chr15g0076401 Lupinus albus
Lj1g0015234 Lotus japonicus
Lj3g0014324 Lotus japonicus
Lj9P602T20 Lonicera japonica
Lsat_1_v5_gn_3_140940 Lactuca sativa
Lsat_1_v5_gn_8_20301 Lactuca sativa
Manes.01G267100 Manihot esculenta
Manes.05G019100 Manihot esculenta
MBI13_g41464_MAGBIO Magnolia biondii
Medtr7g117980 Medicago truncatula
Medtr8g027290 Medicago truncatula
MELO3C005995.2 Cucumis melo
MELO3C005996.2 Cucumis melo
MELO3C005997.2 Cucumis melo
MELO3C022249.2 Cucumis melo
MSTRG.20915 Avicennia marina
MSTRG.28279 Avicennia marina
Nitab4.5_0000508g0190 Nicotiana tabacum
Nitab4.5_0005697g0010 Nicotiana tabacum
Nn4g22396 Nelumbo nucifera
Oeu004972.1 Olea europaea
Oeu042952.1 Olea europaea
Peaxi162Scf00014g00294 Petunia axillaris
PGR031G2923 Punica granatum
PGSC0003DMG400007374 Solanum tuberosum
Phvul.006G115800 Phaseolus vulgaris
Phvul.010G116800 Phaseolus vulgaris
Potri.002G175400 Populus trichocarpa
Potri.014G102466 Populus trichocarpa
Prupe.2G193900 Prunus persica
Psat3g001320 Pisum sativum
PSO210G2709 Papaver somniferum
PSO761G0055 Papaver somniferum
QL08p046281 Quercus lobata
RcHm_v2.0_Chr1g0360631 Rosa chinensis
RcHm_v2.0_Chr3g0484701 Rosa chinensis
Rhsim07G0001600 Rhododendron simsii
Sabra14G0075500 Salix brachista
Sc01g0002380 Simmondsia chinensis
Sc23g0001950 Simmondsia chinensis
Sed0006480 Sechium edule
Sed0012028 Sechium edule
Sed0013414 Sechium edule
Sed0013842 Sechium edule
Sed0017381 Sechium edule
Sed0022787 Sechium edule
Sed0025990 Sechium edule
SEGI_05135 Sequoiadendron giganteum
SEGI_14478 Sequoiadendron giganteum
SEGI_20460 Sequoiadendron giganteum
SGA_v2.0_scaffold98G29435 Striga asiatica
Solyc08g067370.1 Solanum lycopersicum
Sopen08g021310 Solanum pennellii
Sp4g28680 Schrenkiella parvula
Sp5g01480 Schrenkiella parvula
TAR339G0002 Trochodendron aralioides
THA.LOC104817612 Tarenaya hassleriana
Thecc.01G336900 Theobroma cacao
Thhalv10001731m.g Eutrema salsugineum
Thhalv10006210m.g Eutrema salsugineum
TPR.G4684 Trifolium pratense
TWI14G0118 Tripterygium wilfordii
TWI59G0661 Tripterygium wilfordii
unitig_8.g4995 Utricularia gibba
VMungo0331G0257 Vigna mungo
VMungo0331G0491 Vigna mungo
VMungo0331G0961 Vigna mungo
VMungo0331G1172 Vigna mungo
VMungo0540G1056 Vigna mungo

User provided reference genes

Program Settings