Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28370 Brassica napus
A09p29740 Brassica napus
Aa31LG9G14690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1442 Anthoceros agrestis
Actinidia06540 Actinidia chinensis
Ah.06g187980 Amaranthus hybridus
Ah.06g192140 Amaranthus hybridus
AL6G41500 Arabidopsis lyrata
AL7G50490 Arabidopsis lyrata
Aqoxy2G00790 Aquilegia oxysepala
Aqoxy2G03827 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.29DKEH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CGL9LR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LFKE78 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.US6JCC Arachis hypogaea
AT4G09012 Arabidopsis thaliana
AT5G39800 Arabidopsis thaliana
AT5G40080 Arabidopsis thaliana
Atru.chr13.1119 Acer truncatum
Atru.chr8.235 Acer truncatum
AUR62004912 Chenopodium quinoa
AUR62011808 Chenopodium quinoa
AUR62041013 Chenopodium quinoa
AUR62043370 Chenopodium quinoa
BcaB01g01378 Brassica carinata
BcaB01g02826 Brassica carinata
BcaC01g04739 Brassica carinata
BcaC04g20940 Brassica carinata
BolC3t15739H Brassica oleracea
BolC9t56602H Brassica oleracea
BraA03t12042Z Brassica rapa
BraA09t38538Z Brassica rapa
C03p34300 Brassica napus
C09p37710 Brassica napus
CAN.G857.13 Capsicum annuum
CAN.G900.47 Capsicum annuum
CANSAT01G1074 Cannabis sativa
CARHR262430 Cardamine hirsuta
Carub.0006s2760 Capsella rubella
Carub.0007s3595 Capsella rubella
Ca_06044_v3 Cicer arietinum L.
Cc03_g14470 Coffea canephora
Cc06_g04150 Coffea canephora
CDE10G0460 Ceratophyllum demersum
CDE10G1133 Ceratophyllum demersum
Cfa002500 Carpinus fangiana
Cfa026851 Carpinus fangiana
Ciclev10013208m.g Citrus clementina
CiPaw.04G103700 Carya illinoinensis
ClCG09G002640 Citrullus lanatus
COL.COLO4_12008 Corchorus olitorius
Cpa.g.sc79.33 Carica papaya
CsaV3_7G032690 Cucumis sativus L.
CSS0016123 Camellia sinensis var. sinensis
DCAR_010173 Daucus carota
DCAR_014024 Daucus carota
Dinv08862 Davidia involucrata
Dinv44804 Davidia involucrata
Duzib041G0743 Durio zibethinus
Duzib093G0975 Durio zibethinus
ECA246G1644 Erigeron canadensis
ECA247G1074 Erigeron canadensis
EL10Ac6g15351 Beta vulgaris
Eucgr.F00376 Eucalyptus grandis
FAN04G0949 Fragaria x ananassa
FAN08G1894 Fragaria x ananassa
FAN13G1462 Fragaria x ananassa
FAN15G0929 Fragaria x ananassa
FAN18G4030 Fragaria x ananassa
FAN20G0937 Fragaria x ananassa
FAN24G1588 Fragaria x ananassa
FvH4_2g10720 Fragaria vesca
FvH4_5g36580 Fragaria vesca
Glyma.04G099100 Glycine max
Glyma.06G100800 Glycine max
Gohir.A06G033500 Gossypium hirsutum
Gohir.D05G226400 Gossypium hirsutum
Gohir.D06G034400 Gossypium hirsutum
Gorai.009G234000 Gossypium raimondii
Gorai.010G037900 Gossypium raimondii
GSVIVG01009082001 Vitis vinifera
HanXRQChr02g0058081 Helianthus annuus
HanXRQChr05g0163111 Helianthus annuus
HanXRQChr10g0278161 Helianthus annuus
Haze_24725 Corylus avellana
Hma1.2p1_1148F.1_g261590 Hydrangea macrophylla
Hma1.2p1_1613F.1_g293659 Hydrangea macrophylla
Hund06956 Selenicereus undatus
Lalb_Chr23g0270361 Lupinus albus
Lsat_1_v5_gn_6_104280 Lactuca sativa
Manes.02G149200 Manihot esculenta
Manes.18G063900 Manihot esculenta
Mapoly0032s0009 Marchantia polymorpha
MBI04_g21152_MAGBIO Magnolia biondii
MCO03G283 Micromonas commoda
MD02G1257900 Malus domestica
MD08G1188400 Malus domestica
MELO3C023395.2 Cucumis melo
Migut.H02239 Erythranthe guttata
Nitab4.5_0000101g0440 Nicotiana tabacum
Nitab4.5_0000786g0040 Nicotiana tabacum
Nitab4.5_0002632g0100 Nicotiana tabacum
Nitab4.5_0003599g0030 Nicotiana tabacum
Nn1g05456 Nelumbo nucifera
Nn4g23465 Nelumbo nucifera
Nn5g30001 Nelumbo nucifera
Oeu009430.2 Olea europaea
Oeu048963.1 Olea europaea
Peaxi162Scf00030g02315 Petunia axillaris
Peaxi162Scf00074g01332 Petunia axillaris
Peaxi162Scf00701g00514 Petunia axillaris
PGR004G1351 Punica granatum
PGR031G0804 Punica granatum
PGSC0003DMG400030836 Solanum tuberosum
Phvul.009G033000 Phaseolus vulgaris
Potri.005G161600 Populus trichocarpa
Potri.006G070700 Populus trichocarpa
Pp3c24_110 Physcomitrium patens
PRCOL_00003521 Prasinoderma coloniale
Prupe.1G522900 Prunus persica
Prupe.6G102500 Prunus persica
Psat2g132800 Pisum sativum
Psat4g105040 Pisum sativum
PSO447G0232 Papaver somniferum
PSO541G3534 Papaver somniferum
PSO675G3208 Papaver somniferum
PSO700G0162 Papaver somniferum
QL06p048114 Quercus lobata
QL12p001007 Quercus lobata
RcHm_v2.0_Chr3g0492081 Rosa chinensis
RcHm_v2.0_Chr7g0242281 Rosa chinensis
Rhsim02G0249800 Rhododendron simsii
Rhsim08G0013500 Rhododendron simsii
Rhsim10G0001600 Rhododendron simsii
Sabra05G0122300 Salix brachista
Sabra06G0052600 Salix brachista
SalBow1G1053 Salvia bowleyana
SalBow1G1735 Salvia bowleyana
SalBow1G3565 Salvia bowleyana
SalBow1G5084 Salvia bowleyana
SalBow1G5590 Salvia bowleyana
SalBow1G6918 Salvia bowleyana
SalBow1G7711 Salvia bowleyana
SalBow1G8490 Salvia bowleyana
SalBow5G4864 Salvia bowleyana
SalBow8G1434 Salvia bowleyana
SalBow8G1852 Salvia bowleyana
Sc20g0000280 Simmondsia chinensis
Sed0017764 Sechium edule
Sed0022777 Sechium edule
Solyc04g074690.3 Solanum lycopersicum
Sopen04g029660 Solanum pennellii
Sp6g08590 Schrenkiella parvula
TAR381G0524 Trochodendron aralioides
TAR628G1673 Trochodendron aralioides
THA.LOC104813109 Tarenaya hassleriana
THA.LOC104816621 Tarenaya hassleriana
Thecc.08G102200 Theobroma cacao
Thhalv10028005m.g Eutrema salsugineum
Thhalv10029093m.g Eutrema salsugineum
TWI12G0685 Tripterygium wilfordii
TWI36G0317 Tripterygium wilfordii
TWI56G0038 Tripterygium wilfordii
unitig_32.g11785 Utricularia gibba
vmacro18578 Vaccinium macrocarpon
Zm00001eb032040 Zea mays
Zm00001eb211130 Zea mays

User provided reference genes

Program Settings